RNA–Protein interactions for RNA: ENST00000498758.3

RN7SL833P-201, Transcript of RNA, 7SL, cytoplasmic 833, pseudogene, humanhuman

BASIC

Gene RN7SL833P, Length 284 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL833P-201ENST00000498758 NISCHQ9Y2I1 1504 aa29.18■■■□□ 2.26
RN7SL833P-201ENST00000498758 ABCC9O60706 1549 aa26.37■■□□□ 1.81
RN7SL833P-201ENST00000498758 CCDC180Q9P1Z9 1646 aa26.17■■□□□ 1.78
RN7SL833P-201ENST00000498758 RB1CC1Q8TDY2 1594 aa25.02■■□□□ 1.6
RN7SL833P-201ENST00000498758 DCAF8L2P0C7V8 631 aa24.91■■□□□ 1.58
RN7SL833P-201ENST00000498758 DNAJC5BQ9UF47 199 aa24.84■■□□□ 1.57
RN7SL833P-201ENST00000498758 NACADO15069 1562 aa24.82■■□□□ 1.56
RN7SL833P-201ENST00000498758 PABPN1Q86U42 306 aaKnown RBP eCLIP24.61■■□□□ 1.53
RN7SL833P-201ENST00000498758 MYO15BQ96JP2 1530 aa24.4■■□□□ 1.5
RN7SL833P-201ENST00000498758 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
RN7SL833P-201ENST00000498758 BICRAQ9NZM4 1560 aa24.24■■□□□ 1.47
RN7SL833P-201ENST00000498758 ZCCHC6Q5VYS8 1495 aaKnown RBP24.13■■□□□ 1.45
RN7SL833P-201ENST00000498758 DCAF1Q9Y4B6 1507 aa24.06■■□□□ 1.44
RN7SL833P-201ENST00000498758 SHROOM4Q9ULL8 1493 aa23.9■■□□□ 1.42
RN7SL833P-201ENST00000498758 SCRIBQ14160 1630 aa23.9■■□□□ 1.42
RN7SL833P-201ENST00000498758 CC2D2AQ9P2K1 1620 aa23.77■■□□□ 1.4
RN7SL833P-201ENST00000498758 CECR2Q9BXF3 1484 aa23.75■■□□□ 1.39
RN7SL833P-201ENST00000498758 EIF4G1Q04637 1599 aaKnown RBP23.69■■□□□ 1.38
RN7SL833P-201ENST00000498758 NCAPD3P42695 1498 aa22.93■■□□□ 1.26
RN7SL833P-201ENST00000498758 DNAJC5Q9H3Z4 198 aa22.92■■□□□ 1.26
RN7SL833P-201ENST00000498758 ATAD2BQ9ULI0 1458 aa22.85■■□□□ 1.25
RN7SL833P-201ENST00000498758 ERCC6Q03468 1493 aa22.8■■□□□ 1.24
RN7SL833P-201ENST00000498758 SMARCA2P51531 1590 aa22.77■■□□□ 1.24
RN7SL833P-201ENST00000498758 SMARCA4P51532 1647 aa22.76■■□□□ 1.23
RN7SL833P-201ENST00000498758 CUX2O14529 1486 aa22.73■■□□□ 1.23
RN7SL833P-201ENST00000498758 HMGXB3Q12766 1538 aa22.7■■□□□ 1.22
RN7SL833P-201ENST00000498758 BAZ1AQ9NRL2 1556 aaPredicted RBP22.67■■□□□ 1.22
RN7SL833P-201ENST00000498758 BAZ1BQ9UIG0 1483 aaKnown RBP22.64■■□□□ 1.21
RN7SL833P-201ENST00000498758 NESP48681 1621 aa22.6■■□□□ 1.21
RN7SL833P-201ENST00000498758 PEG3Q9GZU2 1588 aa22.51■■□□□ 1.19
RN7SL833P-201ENST00000498758 MROH2BQ7Z745 1585 aa22.48■■□□□ 1.19
RN7SL833P-201ENST00000498758 LAMC3Q9Y6N6 1575 aa22.42■■□□□ 1.18
RN7SL833P-201ENST00000498758 PDS5BQ9NTI5 1447 aa22.36■■□□□ 1.17
RN7SL833P-201ENST00000498758 THOC2Q8NI27 1593 aaKnown RBP22.31■■□□□ 1.16
RN7SL833P-201ENST00000498758 CADPSQ9ULU8 1353 aa22.27■■□□□ 1.16
RN7SL833P-201ENST00000498758 KIF21AQ7Z4S6 1674 aa22.26■■□□□ 1.15
RN7SL833P-201ENST00000498758 WIZO95785 1651 aa22.21■■□□□ 1.15
RN7SL833P-201ENST00000498758 MRC2Q9UBG0 1479 aa22.11■■□□□ 1.13
RN7SL833P-201ENST00000498758 WDR62O43379 1518 aa22.02■■□□□ 1.12
RN7SL833P-201ENST00000498758 CEP164Q9UPV0 1460 aa22.02■■□□□ 1.12
RN7SL833P-201ENST00000498758 RSF1Q96T23 1441 aaPredicted RBP22.01■■□□□ 1.11
RN7SL833P-201ENST00000498758 FANCD2Q9BXW9 1451 aa21.99■■□□□ 1.11
RN7SL833P-201ENST00000498758 CFTRP13569 1480 aa21.95■■□□□ 1.1
RN7SL833P-201ENST00000498758 TRIM41Q8WV44 630 aa21.93■■□□□ 1.1
RN7SL833P-201ENST00000498758 TOP2AP11388 1531 aaKnown RBP21.9■■□□□ 1.1
RN7SL833P-201ENST00000498758 OSCARQ8IYS5 282 aa21.82■■□□□ 1.08
RN7SL833P-201ENST00000498758 URB2Q14146 1524 aaKnown RBP21.78■■□□□ 1.08
RN7SL833P-201ENST00000498758 CCDC88BA6NC98 1476 aa21.71■■□□□ 1.07
RN7SL833P-201ENST00000498758 PRDM2Q13029 1718 aa21.65■■□□□ 1.06
RN7SL833P-201ENST00000498758 IFT140Q96RY7 1462 aa21.58■■□□□ 1.05
RN7SL833P-201ENST00000498758 TOPBP1Q92547 1522 aa21.55■■□□□ 1.04
RN7SL833P-201ENST00000498758 ZNF608Q9ULD9 1512 aaPredicted RBP21.55■■□□□ 1.04
RN7SL833P-201ENST00000498758 ABCC8Q09428 1581 aa21.54■■□□□ 1.04
RN7SL833P-201ENST00000498758 DNMBPQ6XZF7 1577 aa21.44■■□□□ 1.02
RN7SL833P-201ENST00000498758 RIMBP3CA6NJZ7 1639 aa21.4■■□□□ 1.02
RN7SL833P-201ENST00000498758 RIMBP3BA6NNM3 1639 aa21.4■■□□□ 1.02
RN7SL833P-201ENST00000498758 RIMBP3Q9UFD9 1639 aa21.4■■□□□ 1.02
RN7SL833P-201ENST00000498758 AQRO60306 1485 aaKnown RBP eCLIP21.39■■□□□ 1.01
RN7SL833P-201ENST00000498758 FBLN2P98095 1184 aa21.38■■□□□ 1.01
RN7SL833P-201ENST00000498758 EIF4G3O43432 1585 aaKnown RBP21.37■■□□□ 1.01
RN7SL833P-201ENST00000498758 ARHGEF11O15085 1522 aa21.33■■□□□ 1
RN7SL833P-201ENST00000498758 CYB5RLQ6IPT4 315 aa21.32■■□□□ 1
RN7SL833P-201ENST00000498758 TARBP1Q13395 1621 aaKnown RBP21.32■■□□□ 1
RN7SL833P-201ENST00000498758 POLA1P09884 1462 aaPredicted RBP21.31■■□□□ 1
RN7SL833P-201ENST00000498758 SOGA1O94964 1423 aa21.29■■□□□ 1
RN7SL833P-201ENST00000498758 RAD54L2Q9Y4B4 1467 aa21.27■■□□□ 1
RN7SL833P-201ENST00000498758 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
RN7SL833P-201ENST00000498758 CHD1O14646 1710 aa21.24■□□□□ 0.99
RN7SL833P-201ENST00000498758 CHMP7Q8WUX9 453 aaPredicted RBP21.18■□□□□ 0.98
RN7SL833P-201ENST00000498758 FGD5Q6ZNL6 1462 aa21.18■□□□□ 0.98
RN7SL833P-201ENST00000498758 TRHP20396 242 aaPredicted RBP21.15■□□□□ 0.98
RN7SL833P-201ENST00000498758 SNAPC4Q5SXM2 1469 aa21.13■□□□□ 0.97
RN7SL833P-201ENST00000498758 CUX1P39880 1505 aa21.12■□□□□ 0.97
RN7SL833P-201ENST00000498758 SUPT5HO00267 1087 aaKnown RBP21.11■□□□□ 0.97
RN7SL833P-201ENST00000498758 ARAP1Q96P48 1450 aa21.1■□□□□ 0.97
RN7SL833P-201ENST00000498758 WDR97A6NE52 1622 aa21.1■□□□□ 0.97
RN7SL833P-201ENST00000498758 GRIN2BQ13224 1484 aa21.07■□□□□ 0.96
RN7SL833P-201ENST00000498758 MAGI1Q96QZ7 1491 aaPredicted RBP21.06■□□□□ 0.96
RN7SL833P-201ENST00000498758 SYNJ1O43426 1573 aa21.02■□□□□ 0.96
RN7SL833P-201ENST00000498758 SYNJ2O15056 1496 aa21.01■□□□□ 0.95
RN7SL833P-201ENST00000498758 GAPVD1Q14C86 1478 aa21■□□□□ 0.95
RN7SL833P-201ENST00000498758 CLASP1Q7Z460 1538 aa20.99■□□□□ 0.95
RN7SL833P-201ENST00000498758 ABCA10Q8WWZ4 1543 aa20.92■□□□□ 0.94
RN7SL833P-201ENST00000498758 PBRM1Q86U86 1689 aa20.92■□□□□ 0.94
RN7SL833P-201ENST00000498758 WRNQ14191 1432 aaPredicted RBP eCLIP20.87■□□□□ 0.93
RN7SL833P-201ENST00000498758 ABCA5Q8WWZ7 1642 aa20.85■□□□□ 0.93
RN7SL833P-201ENST00000498758 GRIN2AQ12879 1464 aa20.78■□□□□ 0.92
RN7SL833P-201ENST00000498758 TOP2BQ02880 1626 aa20.75■□□□□ 0.91
RN7SL833P-201ENST00000498758 BIVM-ERCC5R4GMW8 1640 aa20.73■□□□□ 0.91
RN7SL833P-201ENST00000498758 FHAD1B1AJZ9 1412 aa20.72■□□□□ 0.91
RN7SL833P-201ENST00000498758 ADAMTS12P58397 1594 aa20.71■□□□□ 0.91
RN7SL833P-201ENST00000498758 NUP160Q12769 1436 aa20.7■□□□□ 0.9
RN7SL833P-201ENST00000498758 CEP170Q5SW79 1584 aa20.68■□□□□ 0.9
RN7SL833P-201ENST00000498758 ERCC6L2Q5T890 1561 aa20.68■□□□□ 0.9
RN7SL833P-201ENST00000498758 ERICH3Q5RHP9 1530 aa20.66■□□□□ 0.9
RN7SL833P-201ENST00000498758 AEBP2Q6ZN18 517 aaPredicted RBP20.62■□□□□ 0.89
RN7SL833P-201ENST00000498758 JPH4Q96JJ6 628 aa20.62■□□□□ 0.89
RN7SL833P-201ENST00000498758 SHROOM2Q13796 1616 aa20.57■□□□□ 0.88
RN7SL833P-201ENST00000498758 PRG4Q92954 1404 aaPredicted RBP20.57■□□□□ 0.88
RN7SL833P-201ENST00000498758 NPM1P06748 294 aaKnown RBP eCLIP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms