RNA–Protein interactions for RNA: ENST00000498736.3

RN7SL388P-201, Transcript of RNA, 7SL, cytoplasmic 388, pseudogene, humanhuman

BASIC

Gene RN7SL388P, Length 339 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL388P-201ENST00000498736 NISCHQ9Y2I1 1504 aa18.38■□□□□ 0.53
RN7SL388P-201ENST00000498736 CCDC180Q9P1Z9 1646 aa16.28■□□□□ 0.2
RN7SL388P-201ENST00000498736 ZCCHC6Q5VYS8 1495 aaKnown RBP15.42■□□□□ 0.06
RN7SL388P-201ENST00000498736 ABCC9O60706 1549 aa15.32■□□□□ 0.04
RN7SL388P-201ENST00000498736 DCAF1Q9Y4B6 1507 aa15.29■□□□□ 0.04
RN7SL388P-201ENST00000498736 MYO15BQ96JP2 1530 aa15.22■□□□□ 0.03
RN7SL388P-201ENST00000498736 AEBP2Q6ZN18 517 aaPredicted RBP15.17■□□□□ 0.02
RN7SL388P-201ENST00000498736 NACADO15069 1562 aa15.12■□□□□ 0.01
RN7SL388P-201ENST00000498736 RB1CC1Q8TDY2 1594 aa15.02■□□□□ -0
RN7SL388P-201ENST00000498736 DCAF8L2P0C7V8 631 aa14.94□□□□□ -0.02
RN7SL388P-201ENST00000498736 UNC13AQ9UPW8 1703 aa14.82□□□□□ -0.04
RN7SL388P-201ENST00000498736 SCRIBQ14160 1630 aa14.76□□□□□ -0.05
RN7SL388P-201ENST00000498736 SHROOM4Q9ULL8 1493 aa14.61□□□□□ -0.07
RN7SL388P-201ENST00000498736 BICRAQ9NZM4 1560 aa14.58□□□□□ -0.08
RN7SL388P-201ENST00000498736 CHIC1Q5VXU3 224 aa14.57□□□□□ -0.08
RN7SL388P-201ENST00000498736 PABPN1Q86U42 306 aaKnown RBP eCLIP14.3□□□□□ -0.12
RN7SL388P-201ENST00000498736 BAZ1AQ9NRL2 1556 aaPredicted RBP14.23□□□□□ -0.13
RN7SL388P-201ENST00000498736 CECR2Q9BXF3 1484 aa14.22□□□□□ -0.13
RN7SL388P-201ENST00000498736 SMARCA4P51532 1647 aa14.21□□□□□ -0.13
RN7SL388P-201ENST00000498736 MROH2BQ7Z745 1585 aa14.15□□□□□ -0.14
RN7SL388P-201ENST00000498736 EIF4G1Q04637 1599 aaKnown RBP14.13□□□□□ -0.15
RN7SL388P-201ENST00000498736 RSF1Q96T23 1441 aaPredicted RBP14.12□□□□□ -0.15
RN7SL388P-201ENST00000498736 PEG3Q9GZU2 1588 aa14.1□□□□□ -0.15
RN7SL388P-201ENST00000498736 WIZO95785 1651 aa14.05□□□□□ -0.16
RN7SL388P-201ENST00000498736 SMARCA2P51531 1590 aa14.01□□□□□ -0.17
RN7SL388P-201ENST00000498736 CC2D2AQ9P2K1 1620 aa13.97□□□□□ -0.17
RN7SL388P-201ENST00000498736 ATAD2BQ9ULI0 1458 aa13.96□□□□□ -0.17
RN7SL388P-201ENST00000498736 TOP2AP11388 1531 aaKnown RBP13.94□□□□□ -0.18
RN7SL388P-201ENST00000498736 HMGXB3Q12766 1538 aa13.94□□□□□ -0.18
RN7SL388P-201ENST00000498736 SUPT5HO00267 1087 aaKnown RBP13.93□□□□□ -0.18
RN7SL388P-201ENST00000498736 NCAPD3P42695 1498 aa13.91□□□□□ -0.18
RN7SL388P-201ENST00000498736 BAZ1BQ9UIG0 1483 aaKnown RBP13.87□□□□□ -0.19
RN7SL388P-201ENST00000498736 CCDC88BA6NC98 1476 aa13.71□□□□□ -0.21
RN7SL388P-201ENST00000498736 PRDM2Q13029 1718 aa13.65□□□□□ -0.22
RN7SL388P-201ENST00000498736 DNAJC5BQ9UF47 199 aa13.63□□□□□ -0.23
RN7SL388P-201ENST00000498736 CFTRP13569 1480 aa13.53□□□□□ -0.24
RN7SL388P-201ENST00000498736 LAMC3Q9Y6N6 1575 aa13.52□□□□□ -0.25
RN7SL388P-201ENST00000498736 CADPSQ9ULU8 1353 aa13.48□□□□□ -0.25
RN7SL388P-201ENST00000498736 NESP48681 1621 aa13.4□□□□□ -0.26
RN7SL388P-201ENST00000498736 KIF21AQ7Z4S6 1674 aa13.37□□□□□ -0.27
RN7SL388P-201ENST00000498736 ABCC8Q09428 1581 aa13.35□□□□□ -0.27
RN7SL388P-201ENST00000498736 BIVM-ERCC5R4GMW8 1640 aa13.34□□□□□ -0.27
RN7SL388P-201ENST00000498736 FANCD2Q9BXW9 1451 aa13.34□□□□□ -0.27
RN7SL388P-201ENST00000498736 PDS5BQ9NTI5 1447 aa13.33□□□□□ -0.28
RN7SL388P-201ENST00000498736 SYNJ1O43426 1573 aa13.3□□□□□ -0.28
RN7SL388P-201ENST00000498736 TOP2BQ02880 1626 aa13.3□□□□□ -0.28
RN7SL388P-201ENST00000498736 CEP164Q9UPV0 1460 aa13.29□□□□□ -0.28
RN7SL388P-201ENST00000498736 WRNQ14191 1432 aaPredicted RBP eCLIP13.29□□□□□ -0.28
RN7SL388P-201ENST00000498736 CUX1P39880 1505 aa13.26□□□□□ -0.29
RN7SL388P-201ENST00000498736 DNMBPQ6XZF7 1577 aa13.25□□□□□ -0.29
RN7SL388P-201ENST00000498736 THOC2Q8NI27 1593 aaKnown RBP13.22□□□□□ -0.29
RN7SL388P-201ENST00000498736 URB2Q14146 1524 aaKnown RBP13.2□□□□□ -0.3
RN7SL388P-201ENST00000498736 TOPBP1Q92547 1522 aa13.2□□□□□ -0.3
RN7SL388P-201ENST00000498736 MRC2Q9UBG0 1479 aa13.19□□□□□ -0.3
RN7SL388P-201ENST00000498736 WDR62O43379 1518 aa13.18□□□□□ -0.3
RN7SL388P-201ENST00000498736 TRIM41Q8WV44 630 aa13.17□□□□□ -0.3
RN7SL388P-201ENST00000498736 ERCC6Q03468 1493 aa13.16□□□□□ -0.3
RN7SL388P-201ENST00000498736 WDR97A6NE52 1622 aa13.13□□□□□ -0.31
RN7SL388P-201ENST00000498736 FGD5Q6ZNL6 1462 aa13.13□□□□□ -0.31
RN7SL388P-201ENST00000498736 POLA1P09884 1462 aaPredicted RBP13.11□□□□□ -0.31
RN7SL388P-201ENST00000498736 TARBP1Q13395 1621 aaKnown RBP13.08□□□□□ -0.32
RN7SL388P-201ENST00000498736 ABCA10Q8WWZ4 1543 aa13.06□□□□□ -0.32
RN7SL388P-201ENST00000498736 EEA1Q15075 1411 aa13.05□□□□□ -0.32
RN7SL388P-201ENST00000498736 CUX2O14529 1486 aa13.04□□□□□ -0.32
RN7SL388P-201ENST00000498736 ABCA5Q8WWZ7 1642 aa13.02□□□□□ -0.32
RN7SL388P-201ENST00000498736 SOGA1O94964 1423 aa13.01□□□□□ -0.33
RN7SL388P-201ENST00000498736 IFT140Q96RY7 1462 aa13□□□□□ -0.33
RN7SL388P-201ENST00000498736 RAD54L2Q9Y4B4 1467 aa13□□□□□ -0.33
RN7SL388P-201ENST00000498736 RUSC2Q8N2Y8 1516 aa12.98□□□□□ -0.33
RN7SL388P-201ENST00000498736 KIF27Q86VH2 1401 aa12.97□□□□□ -0.33
RN7SL388P-201ENST00000498736 PBRM1Q86U86 1689 aa12.97□□□□□ -0.33
RN7SL388P-201ENST00000498736 KIF21BO75037 1637 aa12.94□□□□□ -0.34
RN7SL388P-201ENST00000498736 CUL7Q14999 1698 aa12.93□□□□□ -0.34
RN7SL388P-201ENST00000498736 EIF4G3O43432 1585 aaKnown RBP12.93□□□□□ -0.34
RN7SL388P-201ENST00000498736 ERICH3Q5RHP9 1530 aa12.93□□□□□ -0.34
RN7SL388P-201ENST00000498736 GAPVD1Q14C86 1478 aa12.91□□□□□ -0.34
RN7SL388P-201ENST00000498736 ZNF608Q9ULD9 1512 aaPredicted RBP12.88□□□□□ -0.35
RN7SL388P-201ENST00000498736 PRXQ9BXM0 1461 aa12.87□□□□□ -0.35
RN7SL388P-201ENST00000498736 CSRNP3Q8WYN3 585 aa12.87□□□□□ -0.35
RN7SL388P-201ENST00000498736 PHF23Q9BUL5 403 aaPredicted RBP12.87□□□□□ -0.35
RN7SL388P-201ENST00000498736 GRIN2BQ13224 1484 aa12.85□□□□□ -0.35
RN7SL388P-201ENST00000498736 IGF1RP08069 1367 aa12.85□□□□□ -0.35
RN7SL388P-201ENST00000498736 TDRD9Q8NDG6 1382 aaKnown RBP12.85□□□□□ -0.35
RN7SL388P-201ENST00000498736 ADAMTS12P58397 1594 aa12.85□□□□□ -0.35
RN7SL388P-201ENST00000498736 FAM9AQ8IZU1 332 aaPredicted RBP12.83□□□□□ -0.36
RN7SL388P-201ENST00000498736 AQRO60306 1485 aaKnown RBP eCLIP12.83□□□□□ -0.36
RN7SL388P-201ENST00000498736 GOLGA3Q08378 1498 aa12.82□□□□□ -0.36
RN7SL388P-201ENST00000498736 MAGI1Q96QZ7 1491 aaPredicted RBP12.8□□□□□ -0.36
RN7SL388P-201ENST00000498736 RAPGEF2Q9Y4G8 1499 aa12.78□□□□□ -0.36
RN7SL388P-201ENST00000498736 CTTNBP2Q8WZ74 1663 aa12.78□□□□□ -0.36
RN7SL388P-201ENST00000498736 SENP3Q9H4L4 574 aaPredicted RBP12.78□□□□□ -0.36
RN7SL388P-201ENST00000498736 CARMIL1Q5VZK9 1371 aa12.78□□□□□ -0.36
RN7SL388P-201ENST00000498736 FHAD1B1AJZ9 1412 aa12.77□□□□□ -0.37
RN7SL388P-201ENST00000498736 SNAPC4Q5SXM2 1469 aa12.77□□□□□ -0.37
RN7SL388P-201ENST00000498736 CHD1O14646 1710 aa12.73□□□□□ -0.37
RN7SL388P-201ENST00000498736 SYNJ2O15056 1496 aa12.72□□□□□ -0.37
RN7SL388P-201ENST00000498736 TNIKQ9UKE5 1360 aa12.72□□□□□ -0.37
RN7SL388P-201ENST00000498736 LOC105371045A0A1W2PR82 267 aa12.71□□□□□ -0.37
RN7SL388P-201ENST00000498736 GRIN2AQ12879 1464 aa12.7□□□□□ -0.38
RN7SL388P-201ENST00000498736 CEP170Q5SW79 1584 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms