RNA–Protein interactions for RNA: ENST00000498715.1

UMPS-210, Transcript of uridine monophosphate synthetase, humanhuman

TSL 3

Gene UMPS, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UMPS-210ENST00000498715 NISCHQ9Y2I1 1504 aa24.84■■□□□ 1.57
UMPS-210ENST00000498715 ABCC9O60706 1549 aa22.36■■□□□ 1.17
UMPS-210ENST00000498715 CCDC180Q9P1Z9 1646 aa22.29■■□□□ 1.16
UMPS-210ENST00000498715 RB1CC1Q8TDY2 1594 aa21.27■□□□□ 0.99
UMPS-210ENST00000498715 NACADO15069 1562 aa21.13■□□□□ 0.97
UMPS-210ENST00000498715 DNAJC5BQ9UF47 199 aa21.04■□□□□ 0.96
UMPS-210ENST00000498715 DCAF8L2P0C7V8 631 aa20.93■□□□□ 0.94
UMPS-210ENST00000498715 MYO15BQ96JP2 1530 aa20.88■□□□□ 0.93
UMPS-210ENST00000498715 PABPN1Q86U42 306 aaKnown RBP eCLIP20.81■□□□□ 0.92
UMPS-210ENST00000498715 UNC13AQ9UPW8 1703 aa20.65■□□□□ 0.9
UMPS-210ENST00000498715 BICRAQ9NZM4 1560 aa20.63■□□□□ 0.89
UMPS-210ENST00000498715 ZCCHC6Q5VYS8 1495 aaKnown RBP20.59■□□□□ 0.89
UMPS-210ENST00000498715 DCAF1Q9Y4B6 1507 aa20.57■□□□□ 0.88
UMPS-210ENST00000498715 SHROOM4Q9ULL8 1493 aa20.46■□□□□ 0.87
UMPS-210ENST00000498715 SCRIBQ14160 1630 aa20.27■□□□□ 0.84
UMPS-210ENST00000498715 CECR2Q9BXF3 1484 aa20.18■□□□□ 0.82
UMPS-210ENST00000498715 CC2D2AQ9P2K1 1620 aa20.17■□□□□ 0.82
UMPS-210ENST00000498715 EIF4G1Q04637 1599 aaKnown RBP20.15■□□□□ 0.82
UMPS-210ENST00000498715 NCAPD3P42695 1498 aa19.54■□□□□ 0.72
UMPS-210ENST00000498715 ATAD2BQ9ULI0 1458 aa19.44■□□□□ 0.7
UMPS-210ENST00000498715 DNAJC5Q9H3Z4 198 aa19.41■□□□□ 0.7
UMPS-210ENST00000498715 SMARCA2P51531 1590 aa19.38■□□□□ 0.69
UMPS-210ENST00000498715 SMARCA4P51532 1647 aa19.36■□□□□ 0.69
UMPS-210ENST00000498715 HMGXB3Q12766 1538 aa19.36■□□□□ 0.69
UMPS-210ENST00000498715 CUX2O14529 1486 aa19.36■□□□□ 0.69
UMPS-210ENST00000498715 ERCC6Q03468 1493 aa19.33■□□□□ 0.68
UMPS-210ENST00000498715 BAZ1AQ9NRL2 1556 aaPredicted RBP19.29■□□□□ 0.68
UMPS-210ENST00000498715 BAZ1BQ9UIG0 1483 aaKnown RBP19.24■□□□□ 0.67
UMPS-210ENST00000498715 PEG3Q9GZU2 1588 aa19.23■□□□□ 0.67
UMPS-210ENST00000498715 NESP48681 1621 aa19.18■□□□□ 0.66
UMPS-210ENST00000498715 MROH2BQ7Z745 1585 aa19.12■□□□□ 0.65
UMPS-210ENST00000498715 AEBP2Q6ZN18 517 aaPredicted RBP19.09■□□□□ 0.65
UMPS-210ENST00000498715 LAMC3Q9Y6N6 1575 aa19.06■□□□□ 0.64
UMPS-210ENST00000498715 THOC2Q8NI27 1593 aaKnown RBP19■□□□□ 0.63
UMPS-210ENST00000498715 PDS5BQ9NTI5 1447 aa19■□□□□ 0.63
UMPS-210ENST00000498715 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
UMPS-210ENST00000498715 KIF21AQ7Z4S6 1674 aa18.85■□□□□ 0.61
UMPS-210ENST00000498715 WIZO95785 1651 aa18.83■□□□□ 0.61
UMPS-210ENST00000498715 MRC2Q9UBG0 1479 aa18.82■□□□□ 0.6
UMPS-210ENST00000498715 WDR62O43379 1518 aa18.77■□□□□ 0.6
UMPS-210ENST00000498715 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
UMPS-210ENST00000498715 CEP164Q9UPV0 1460 aa18.72■□□□□ 0.59
UMPS-210ENST00000498715 CFTRP13569 1480 aa18.7■□□□□ 0.58
UMPS-210ENST00000498715 FANCD2Q9BXW9 1451 aa18.7■□□□□ 0.58
UMPS-210ENST00000498715 TOP2AP11388 1531 aaKnown RBP18.67■□□□□ 0.58
UMPS-210ENST00000498715 URB2Q14146 1524 aaKnown RBP18.53■□□□□ 0.56
UMPS-210ENST00000498715 TRIM41Q8WV44 630 aa18.47■□□□□ 0.55
UMPS-210ENST00000498715 OSCARQ8IYS5 282 aa18.44■□□□□ 0.54
UMPS-210ENST00000498715 CCDC88BA6NC98 1476 aa18.44■□□□□ 0.54
UMPS-210ENST00000498715 IFT140Q96RY7 1462 aa18.37■□□□□ 0.53
UMPS-210ENST00000498715 PRDM2Q13029 1718 aa18.37■□□□□ 0.53
UMPS-210ENST00000498715 TOPBP1Q92547 1522 aa18.32■□□□□ 0.52
UMPS-210ENST00000498715 ABCC8Q09428 1581 aa18.31■□□□□ 0.52
UMPS-210ENST00000498715 ZNF608Q9ULD9 1512 aaPredicted RBP18.3■□□□□ 0.52
UMPS-210ENST00000498715 DNMBPQ6XZF7 1577 aa18.25■□□□□ 0.51
UMPS-210ENST00000498715 EIF4G3O43432 1585 aaKnown RBP18.18■□□□□ 0.5
UMPS-210ENST00000498715 CHIC1Q5VXU3 224 aa18.15■□□□□ 0.5
UMPS-210ENST00000498715 RIMBP3CA6NJZ7 1639 aa18.15■□□□□ 0.5
UMPS-210ENST00000498715 RIMBP3BA6NNM3 1639 aa18.15■□□□□ 0.5
UMPS-210ENST00000498715 RIMBP3Q9UFD9 1639 aa18.15■□□□□ 0.5
UMPS-210ENST00000498715 AQRO60306 1485 aaKnown RBP eCLIP18.14■□□□□ 0.49
UMPS-210ENST00000498715 POLA1P09884 1462 aaPredicted RBP18.14■□□□□ 0.49
UMPS-210ENST00000498715 TARBP1Q13395 1621 aaKnown RBP18.13■□□□□ 0.49
UMPS-210ENST00000498715 ARHGEF11O15085 1522 aa18.13■□□□□ 0.49
UMPS-210ENST00000498715 SOGA1O94964 1423 aa18.06■□□□□ 0.48
UMPS-210ENST00000498715 RAD54L2Q9Y4B4 1467 aa18.05■□□□□ 0.48
UMPS-210ENST00000498715 TDRD9Q8NDG6 1382 aaKnown RBP18.02■□□□□ 0.47
UMPS-210ENST00000498715 WDR97A6NE52 1622 aa18.01■□□□□ 0.47
UMPS-210ENST00000498715 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
UMPS-210ENST00000498715 FBLN2P98095 1184 aa18■□□□□ 0.47
UMPS-210ENST00000498715 CHD1O14646 1710 aa17.99■□□□□ 0.47
UMPS-210ENST00000498715 CYB5RLQ6IPT4 315 aa17.98■□□□□ 0.47
UMPS-210ENST00000498715 CUX1P39880 1505 aa17.97■□□□□ 0.47
UMPS-210ENST00000498715 SNAPC4Q5SXM2 1469 aa17.96■□□□□ 0.47
UMPS-210ENST00000498715 ARAP1Q96P48 1450 aa17.95■□□□□ 0.46
UMPS-210ENST00000498715 MAGI1Q96QZ7 1491 aaPredicted RBP17.94■□□□□ 0.46
UMPS-210ENST00000498715 GRIN2BQ13224 1484 aa17.92■□□□□ 0.46
UMPS-210ENST00000498715 CHMP7Q8WUX9 453 aaPredicted RBP17.9■□□□□ 0.46
UMPS-210ENST00000498715 CLASP1Q7Z460 1538 aa17.88■□□□□ 0.45
UMPS-210ENST00000498715 SYNJ2O15056 1496 aa17.88■□□□□ 0.45
UMPS-210ENST00000498715 SYNJ1O43426 1573 aa17.86■□□□□ 0.45
UMPS-210ENST00000498715 GAPVD1Q14C86 1478 aa17.83■□□□□ 0.45
UMPS-210ENST00000498715 ABCA10Q8WWZ4 1543 aa17.82■□□□□ 0.44
UMPS-210ENST00000498715 SUPT5HO00267 1087 aaKnown RBP17.79■□□□□ 0.44
UMPS-210ENST00000498715 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
UMPS-210ENST00000498715 ABCA5Q8WWZ7 1642 aa17.76■□□□□ 0.43
UMPS-210ENST00000498715 WRNQ14191 1432 aaPredicted RBP eCLIP17.74■□□□□ 0.43
UMPS-210ENST00000498715 PBRM1Q86U86 1689 aa17.74■□□□□ 0.43
UMPS-210ENST00000498715 GRIN2AQ12879 1464 aa17.69■□□□□ 0.42
UMPS-210ENST00000498715 TOP2BQ02880 1626 aa17.66■□□□□ 0.42
UMPS-210ENST00000498715 NUP160Q12769 1436 aa17.65■□□□□ 0.42
UMPS-210ENST00000498715 ADAMTS12P58397 1594 aa17.64■□□□□ 0.41
UMPS-210ENST00000498715 BIVM-ERCC5R4GMW8 1640 aa17.64■□□□□ 0.41
UMPS-210ENST00000498715 FHAD1B1AJZ9 1412 aa17.63■□□□□ 0.41
UMPS-210ENST00000498715 CEP170Q5SW79 1584 aa17.59■□□□□ 0.41
UMPS-210ENST00000498715 ERICH3Q5RHP9 1530 aa17.59■□□□□ 0.41
UMPS-210ENST00000498715 ERCC6L2Q5T890 1561 aa17.55■□□□□ 0.4
UMPS-210ENST00000498715 SHROOM2Q13796 1616 aa17.53■□□□□ 0.4
UMPS-210ENST00000498715 PRG4Q92954 1404 aaPredicted RBP17.46■□□□□ 0.39
UMPS-210ENST00000498715 JPH4Q96JJ6 628 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms