RNA–Protein interactions for RNA: ENST00000498660.1

TUBA4A-210, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-210ENST00000498660 NISCHQ9Y2I1 1504 aa20.27■□□□□ 0.84
TUBA4A-210ENST00000498660 ABCC9O60706 1549 aa17.98■□□□□ 0.47
TUBA4A-210ENST00000498660 CCDC180Q9P1Z9 1646 aa17.88■□□□□ 0.45
TUBA4A-210ENST00000498660 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
TUBA4A-210ENST00000498660 RB1CC1Q8TDY2 1594 aa17.05■□□□□ 0.32
TUBA4A-210ENST00000498660 DNAJC5BQ9UF47 199 aa17.04■□□□□ 0.32
TUBA4A-210ENST00000498660 NACADO15069 1562 aa16.9■□□□□ 0.3
TUBA4A-210ENST00000498660 DCAF1Q9Y4B6 1507 aa16.83■□□□□ 0.28
TUBA4A-210ENST00000498660 DCAF8L2P0C7V8 631 aa16.77■□□□□ 0.28
TUBA4A-210ENST00000498660 PABPN1Q86U42 306 aaKnown RBP eCLIP16.72■□□□□ 0.27
TUBA4A-210ENST00000498660 MYO15BQ96JP2 1530 aa16.68■□□□□ 0.26
TUBA4A-210ENST00000498660 UNC13AQ9UPW8 1703 aa16.63■□□□□ 0.25
TUBA4A-210ENST00000498660 BICRAQ9NZM4 1560 aa16.56■□□□□ 0.24
TUBA4A-210ENST00000498660 SHROOM4Q9ULL8 1493 aa16.35■□□□□ 0.21
TUBA4A-210ENST00000498660 SCRIBQ14160 1630 aa16.33■□□□□ 0.2
TUBA4A-210ENST00000498660 CC2D2AQ9P2K1 1620 aa16.23■□□□□ 0.19
TUBA4A-210ENST00000498660 CECR2Q9BXF3 1484 aa16.22■□□□□ 0.19
TUBA4A-210ENST00000498660 EIF4G1Q04637 1599 aaKnown RBP16.17■□□□□ 0.18
TUBA4A-210ENST00000498660 DNAJC5Q9H3Z4 198 aa15.78■□□□□ 0.12
TUBA4A-210ENST00000498660 BAZ1AQ9NRL2 1556 aaPredicted RBP15.72■□□□□ 0.11
TUBA4A-210ENST00000498660 SMARCA4P51532 1647 aa15.66■□□□□ 0.1
TUBA4A-210ENST00000498660 MROH2BQ7Z745 1585 aa15.63■□□□□ 0.09
TUBA4A-210ENST00000498660 RSF1Q96T23 1441 aaPredicted RBP15.63■□□□□ 0.09
TUBA4A-210ENST00000498660 SUPT5HO00267 1087 aaKnown RBP15.63■□□□□ 0.09
TUBA4A-210ENST00000498660 NCAPD3P42695 1498 aa15.63■□□□□ 0.09
TUBA4A-210ENST00000498660 CUX2O14529 1486 aa15.58■□□□□ 0.08
TUBA4A-210ENST00000498660 ATAD2BQ9ULI0 1458 aa15.54■□□□□ 0.08
TUBA4A-210ENST00000498660 WIZO95785 1651 aa15.53■□□□□ 0.08
TUBA4A-210ENST00000498660 ERCC6Q03468 1493 aa15.52■□□□□ 0.08
TUBA4A-210ENST00000498660 PEG3Q9GZU2 1588 aa15.49■□□□□ 0.07
TUBA4A-210ENST00000498660 SMARCA2P51531 1590 aa15.48■□□□□ 0.07
TUBA4A-210ENST00000498660 HMGXB3Q12766 1538 aa15.48■□□□□ 0.07
TUBA4A-210ENST00000498660 TOP2AP11388 1531 aaKnown RBP15.43■□□□□ 0.06
TUBA4A-210ENST00000498660 NESP48681 1621 aa15.39■□□□□ 0.05
TUBA4A-210ENST00000498660 BAZ1BQ9UIG0 1483 aaKnown RBP15.37■□□□□ 0.05
TUBA4A-210ENST00000498660 LAMC3Q9Y6N6 1575 aa15.28■□□□□ 0.04
TUBA4A-210ENST00000498660 THOC2Q8NI27 1593 aaKnown RBP15.27■□□□□ 0.03
TUBA4A-210ENST00000498660 PDS5BQ9NTI5 1447 aa15.21■□□□□ 0.03
TUBA4A-210ENST00000498660 KIF21AQ7Z4S6 1674 aa15.17■□□□□ 0.02
TUBA4A-210ENST00000498660 CCDC88BA6NC98 1476 aa15.16■□□□□ 0.02
TUBA4A-210ENST00000498660 CADPSQ9ULU8 1353 aa15.14■□□□□ 0.01
TUBA4A-210ENST00000498660 MRC2Q9UBG0 1479 aa15.08■□□□□ 0
TUBA4A-210ENST00000498660 WDR62O43379 1518 aa15.04■□□□□ -0
TUBA4A-210ENST00000498660 PRDM2Q13029 1718 aa14.98□□□□□ -0.01
TUBA4A-210ENST00000498660 CEP164Q9UPV0 1460 aa14.97□□□□□ -0.01
TUBA4A-210ENST00000498660 TRIM41Q8WV44 630 aa14.97□□□□□ -0.01
TUBA4A-210ENST00000498660 FANCD2Q9BXW9 1451 aa14.95□□□□□ -0.02
TUBA4A-210ENST00000498660 CFTRP13569 1480 aa14.94□□□□□ -0.02
TUBA4A-210ENST00000498660 CHIC1Q5VXU3 224 aa14.91□□□□□ -0.02
TUBA4A-210ENST00000498660 OSCARQ8IYS5 282 aa14.87□□□□□ -0.03
TUBA4A-210ENST00000498660 URB2Q14146 1524 aaKnown RBP14.83□□□□□ -0.04
TUBA4A-210ENST00000498660 ABCC8Q09428 1581 aa14.83□□□□□ -0.04
TUBA4A-210ENST00000498660 WRNQ14191 1432 aaPredicted RBP eCLIP14.75□□□□□ -0.05
TUBA4A-210ENST00000498660 SYNJ1O43426 1573 aa14.73□□□□□ -0.05
TUBA4A-210ENST00000498660 BIVM-ERCC5R4GMW8 1640 aa14.73□□□□□ -0.05
TUBA4A-210ENST00000498660 TOP2BQ02880 1626 aa14.7□□□□□ -0.06
TUBA4A-210ENST00000498660 IFT140Q96RY7 1462 aa14.69□□□□□ -0.06
TUBA4A-210ENST00000498660 ZNF608Q9ULD9 1512 aaPredicted RBP14.67□□□□□ -0.06
TUBA4A-210ENST00000498660 CUX1P39880 1505 aa14.65□□□□□ -0.06
TUBA4A-210ENST00000498660 RIMBP3CA6NJZ7 1639 aa14.64□□□□□ -0.07
TUBA4A-210ENST00000498660 RIMBP3BA6NNM3 1639 aa14.64□□□□□ -0.07
TUBA4A-210ENST00000498660 RIMBP3Q9UFD9 1639 aa14.64□□□□□ -0.07
TUBA4A-210ENST00000498660 TOPBP1Q92547 1522 aa14.64□□□□□ -0.07
TUBA4A-210ENST00000498660 DNMBPQ6XZF7 1577 aa14.61□□□□□ -0.07
TUBA4A-210ENST00000498660 ARHGEF11O15085 1522 aa14.59□□□□□ -0.07
TUBA4A-210ENST00000498660 EIF4G3O43432 1585 aaKnown RBP14.56□□□□□ -0.08
TUBA4A-210ENST00000498660 EEA1Q15075 1411 aa14.54□□□□□ -0.08
TUBA4A-210ENST00000498660 AQRO60306 1485 aaKnown RBP eCLIP14.53□□□□□ -0.08
TUBA4A-210ENST00000498660 TARBP1Q13395 1621 aaKnown RBP14.52□□□□□ -0.08
TUBA4A-210ENST00000498660 FGD5Q6ZNL6 1462 aa14.51□□□□□ -0.09
TUBA4A-210ENST00000498660 CYB5RLQ6IPT4 315 aa14.5□□□□□ -0.09
TUBA4A-210ENST00000498660 POLA1P09884 1462 aaPredicted RBP14.49□□□□□ -0.09
TUBA4A-210ENST00000498660 CHD1O14646 1710 aa14.48□□□□□ -0.09
TUBA4A-210ENST00000498660 SOGA1O94964 1423 aa14.47□□□□□ -0.09
TUBA4A-210ENST00000498660 FBLN2P98095 1184 aa14.45□□□□□ -0.1
TUBA4A-210ENST00000498660 WDR97A6NE52 1622 aa14.44□□□□□ -0.1
TUBA4A-210ENST00000498660 ARAP1Q96P48 1450 aa14.44□□□□□ -0.1
TUBA4A-210ENST00000498660 RAD54L2Q9Y4B4 1467 aa14.44□□□□□ -0.1
TUBA4A-210ENST00000498660 FAM9AQ8IZU1 332 aaPredicted RBP14.42□□□□□ -0.1
TUBA4A-210ENST00000498660 TDRD9Q8NDG6 1382 aaKnown RBP14.42□□□□□ -0.1
TUBA4A-210ENST00000498660 KIF27Q86VH2 1401 aa14.41□□□□□ -0.1
TUBA4A-210ENST00000498660 RUSC2Q8N2Y8 1516 aa14.4□□□□□ -0.1
TUBA4A-210ENST00000498660 ABCA10Q8WWZ4 1543 aa14.4□□□□□ -0.1
TUBA4A-210ENST00000498660 KIF21BO75037 1637 aa14.38□□□□□ -0.11
TUBA4A-210ENST00000498660 TRHP20396 242 aaPredicted RBP14.38□□□□□ -0.11
TUBA4A-210ENST00000498660 SNAPC4Q5SXM2 1469 aa14.36□□□□□ -0.11
TUBA4A-210ENST00000498660 ABCA5Q8WWZ7 1642 aa14.34□□□□□ -0.11
TUBA4A-210ENST00000498660 CHMP7Q8WUX9 453 aaPredicted RBP14.34□□□□□ -0.11
TUBA4A-210ENST00000498660 CLASP1Q7Z460 1538 aa14.34□□□□□ -0.11
TUBA4A-210ENST00000498660 MAGI1Q96QZ7 1491 aaPredicted RBP14.33□□□□□ -0.12
TUBA4A-210ENST00000498660 GOLGA3Q08378 1498 aa14.32□□□□□ -0.12
TUBA4A-210ENST00000498660 CSRNP3Q8WYN3 585 aa14.32□□□□□ -0.12
TUBA4A-210ENST00000498660 GRIN2BQ13224 1484 aa14.31□□□□□ -0.12
TUBA4A-210ENST00000498660 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
TUBA4A-210ENST00000498660 CUL7Q14999 1698 aa14.3□□□□□ -0.12
TUBA4A-210ENST00000498660 SYNJ2O15056 1496 aa14.29□□□□□ -0.12
TUBA4A-210ENST00000498660 PBRM1Q86U86 1689 aa14.28□□□□□ -0.12
TUBA4A-210ENST00000498660 LOC105371045A0A1W2PR82 267 aa14.27□□□□□ -0.13
TUBA4A-210ENST00000498660 PRXQ9BXM0 1461 aa14.25□□□□□ -0.13
TUBA4A-210ENST00000498660 GAPVD1Q14C86 1478 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms