RNA–Protein interactions for RNA: ENST00000498612.1

PRPF31-209, Transcript of pre-mRNA processing factor 31, humanhuman

TSL 5

Gene PRPF31, Length 881 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF31-209ENST00000498612 NISCHQ9Y2I1 1504 aa43.59■■■■■ 4.57
PRPF31-209ENST00000498612 CCDC180Q9P1Z9 1646 aa38.75■■■■□ 3.79
PRPF31-209ENST00000498612 ABCC9O60706 1549 aa37.84■■■■□ 3.65
PRPF31-209ENST00000498612 RB1CC1Q8TDY2 1594 aa36.41■■■■□ 3.42
PRPF31-209ENST00000498612 NACADO15069 1562 aa36.4■■■■□ 3.42
PRPF31-209ENST00000498612 ZCCHC6Q5VYS8 1495 aaKnown RBP36.32■■■■□ 3.41
PRPF31-209ENST00000498612 DCAF8L2P0C7V8 631 aa36.28■■■■□ 3.4
PRPF31-209ENST00000498612 MYO15BQ96JP2 1530 aa36.22■■■■□ 3.39
PRPF31-209ENST00000498612 DCAF1Q9Y4B6 1507 aa36.08■■■■□ 3.37
PRPF31-209ENST00000498612 UNC13AQ9UPW8 1703 aa35.7■■■■□ 3.31
PRPF31-209ENST00000498612 BICRAQ9NZM4 1560 aa35.41■■■■□ 3.26
PRPF31-209ENST00000498612 PABPN1Q86U42 306 aaKnown RBP eCLIP35.35■■■■□ 3.25
PRPF31-209ENST00000498612 SCRIBQ14160 1630 aa35.32■■■■□ 3.25
PRPF31-209ENST00000498612 SHROOM4Q9ULL8 1493 aa34.94■■■■□ 3.18
PRPF31-209ENST00000498612 DNAJC5BQ9UF47 199 aa34.77■■■■□ 3.16
PRPF31-209ENST00000498612 EIF4G1Q04637 1599 aaKnown RBP34.4■■■■□ 3.1
PRPF31-209ENST00000498612 CC2D2AQ9P2K1 1620 aa34.26■■■■□ 3.08
PRPF31-209ENST00000498612 CECR2Q9BXF3 1484 aa33.98■■■■□ 3.03
PRPF31-209ENST00000498612 SMARCA4P51532 1647 aa33.82■■■■□ 3.01
PRPF31-209ENST00000498612 BAZ1AQ9NRL2 1556 aaPredicted RBP33.76■■■□□ 2.99
PRPF31-209ENST00000498612 ATAD2BQ9ULI0 1458 aa33.62■■■□□ 2.97
PRPF31-209ENST00000498612 MROH2BQ7Z745 1585 aa33.61■■■□□ 2.97
PRPF31-209ENST00000498612 NCAPD3P42695 1498 aa33.61■■■□□ 2.97
PRPF31-209ENST00000498612 SMARCA2P51531 1590 aa33.55■■■□□ 2.96
PRPF31-209ENST00000498612 PEG3Q9GZU2 1588 aa33.51■■■□□ 2.96
PRPF31-209ENST00000498612 HMGXB3Q12766 1538 aa33.43■■■□□ 2.94
PRPF31-209ENST00000498612 BAZ1BQ9UIG0 1483 aaKnown RBP33.3■■■□□ 2.92
PRPF31-209ENST00000498612 WIZO95785 1651 aa33.26■■■□□ 2.91
PRPF31-209ENST00000498612 RSF1Q96T23 1441 aaPredicted RBP33.22■■■□□ 2.91
PRPF31-209ENST00000498612 TOP2AP11388 1531 aaKnown RBP32.87■■■□□ 2.85
PRPF31-209ENST00000498612 NESP48681 1621 aa32.79■■■□□ 2.84
PRPF31-209ENST00000498612 LAMC3Q9Y6N6 1575 aa32.7■■■□□ 2.82
PRPF31-209ENST00000498612 CADPSQ9ULU8 1353 aa32.59■■■□□ 2.81
PRPF31-209ENST00000498612 ERCC6Q03468 1493 aa32.54■■■□□ 2.8
PRPF31-209ENST00000498612 CCDC88BA6NC98 1476 aa32.49■■■□□ 2.79
PRPF31-209ENST00000498612 CFTRP13569 1480 aa32.43■■■□□ 2.78
PRPF31-209ENST00000498612 KIF21AQ7Z4S6 1674 aa32.42■■■□□ 2.78
PRPF31-209ENST00000498612 PDS5BQ9NTI5 1447 aa32.42■■■□□ 2.78
PRPF31-209ENST00000498612 SUPT5HO00267 1087 aaKnown RBP32.31■■■□□ 2.76
PRPF31-209ENST00000498612 THOC2Q8NI27 1593 aaKnown RBP32.31■■■□□ 2.76
PRPF31-209ENST00000498612 CUX2O14529 1486 aa32.24■■■□□ 2.75
PRPF31-209ENST00000498612 PRDM2Q13029 1718 aa32.23■■■□□ 2.75
PRPF31-209ENST00000498612 FANCD2Q9BXW9 1451 aa32.22■■■□□ 2.75
PRPF31-209ENST00000498612 CEP164Q9UPV0 1460 aa32.16■■■□□ 2.74
PRPF31-209ENST00000498612 MRC2Q9UBG0 1479 aa32.11■■■□□ 2.73
PRPF31-209ENST00000498612 WDR62O43379 1518 aa32.05■■■□□ 2.72
PRPF31-209ENST00000498612 URB2Q14146 1524 aaKnown RBP31.93■■■□□ 2.7
PRPF31-209ENST00000498612 TOPBP1Q92547 1522 aa31.73■■■□□ 2.67
PRPF31-209ENST00000498612 ABCC8Q09428 1581 aa31.68■■■□□ 2.66
PRPF31-209ENST00000498612 DNMBPQ6XZF7 1577 aa31.68■■■□□ 2.66
PRPF31-209ENST00000498612 CUX1P39880 1505 aa31.52■■■□□ 2.64
PRPF31-209ENST00000498612 IFT140Q96RY7 1462 aa31.48■■■□□ 2.63
PRPF31-209ENST00000498612 POLA1P09884 1462 aaPredicted RBP31.46■■■□□ 2.63
PRPF31-209ENST00000498612 TARBP1Q13395 1621 aaKnown RBP31.42■■■□□ 2.62
PRPF31-209ENST00000498612 ZNF608Q9ULD9 1512 aaPredicted RBP31.39■■■□□ 2.61
PRPF31-209ENST00000498612 FGD5Q6ZNL6 1462 aa31.38■■■□□ 2.61
PRPF31-209ENST00000498612 RAD54L2Q9Y4B4 1467 aa31.33■■■□□ 2.61
PRPF31-209ENST00000498612 SOGA1O94964 1423 aa31.31■■■□□ 2.6
PRPF31-209ENST00000498612 WRNQ14191 1432 aaPredicted RBP eCLIP31.28■■■□□ 2.6
PRPF31-209ENST00000498612 BIVM-ERCC5R4GMW8 1640 aa31.27■■■□□ 2.6
PRPF31-209ENST00000498612 SYNJ1O43426 1573 aa31.26■■■□□ 2.59
PRPF31-209ENST00000498612 EIF4G3O43432 1585 aaKnown RBP31.26■■■□□ 2.59
PRPF31-209ENST00000498612 TOP2BQ02880 1626 aa31.25■■■□□ 2.59
PRPF31-209ENST00000498612 DNAJC5Q9H3Z4 198 aa31.24■■■□□ 2.59
PRPF31-209ENST00000498612 AQRO60306 1485 aaKnown RBP eCLIP31.2■■■□□ 2.585e-9■■■■□ 20.5
PRPF31-209ENST00000498612 WDR97A6NE52 1622 aa31.19■■■□□ 2.58
PRPF31-209ENST00000498612 TDRD9Q8NDG6 1382 aaKnown RBP31.13■■■□□ 2.57
PRPF31-209ENST00000498612 ABCA10Q8WWZ4 1543 aa31.08■■■□□ 2.57
PRPF31-209ENST00000498612 ABCA5Q8WWZ7 1642 aa30.99■■■□□ 2.55
PRPF31-209ENST00000498612 GAPVD1Q14C86 1478 aa30.95■■■□□ 2.54
PRPF31-209ENST00000498612 GRIN2BQ13224 1484 aa30.93■■■□□ 2.54
PRPF31-209ENST00000498612 PBRM1Q86U86 1689 aa30.93■■■□□ 2.54
PRPF31-209ENST00000498612 OSCARQ8IYS5 282 aa30.89■■■□□ 2.54
PRPF31-209ENST00000498612 SNAPC4Q5SXM2 1469 aa30.89■■■□□ 2.53
PRPF31-209ENST00000498612 CHD1O14646 1710 aa30.88■■■□□ 2.53
PRPF31-209ENST00000498612 MAGI1Q96QZ7 1491 aaPredicted RBP30.84■■■□□ 2.53
PRPF31-209ENST00000498612 SYNJ2O15056 1496 aa30.73■■■□□ 2.51
PRPF31-209ENST00000498612 FBLN2P98095 1184 aa30.72■■■□□ 2.51
PRPF31-209ENST00000498612 ERICH3Q5RHP9 1530 aa30.7■■■□□ 2.51
PRPF31-209ENST00000498612 ADAMTS12P58397 1594 aa30.66■■■□□ 2.5
PRPF31-209ENST00000498612 CHMP7Q8WUX9 453 aaPredicted RBP30.66■■■□□ 2.5
PRPF31-209ENST00000498612 KIF27Q86VH2 1401 aa30.6■■■□□ 2.49
PRPF31-209ENST00000498612 FHAD1B1AJZ9 1412 aa30.58■■■□□ 2.49
PRPF31-209ENST00000498612 CLASP1Q7Z460 1538 aa30.55■■■□□ 2.48
PRPF31-209ENST00000498612 GRIN2AQ12879 1464 aa30.55■■■□□ 2.48
PRPF31-209ENST00000498612 IGF1RP08069 1367 aa30.53■■■□□ 2.48
PRPF31-209ENST00000498612 TRIM41Q8WV44 630 aa30.51■■■□□ 2.47
PRPF31-209ENST00000498612 RIMBP3CA6NJZ7 1639 aa30.46■■■□□ 2.47
PRPF31-209ENST00000498612 RIMBP3BA6NNM3 1639 aa30.46■■■□□ 2.47
PRPF31-209ENST00000498612 RIMBP3Q9UFD9 1639 aa30.46■■■□□ 2.47
PRPF31-209ENST00000498612 ARHGEF11O15085 1522 aa30.44■■■□□ 2.46
PRPF31-209ENST00000498612 CUL7Q14999 1698 aa30.43■■■□□ 2.46
PRPF31-209ENST00000498612 NUP160Q12769 1436 aa30.43■■■□□ 2.46
PRPF31-209ENST00000498612 CEP170Q5SW79 1584 aa30.43■■■□□ 2.46
PRPF31-209ENST00000498612 RUSC2Q8N2Y8 1516 aa30.42■■■□□ 2.46
PRPF31-209ENST00000498612 CARMIL1Q5VZK9 1371 aa30.31■■■□□ 2.44
PRPF31-209ENST00000498612 SHROOM2Q13796 1616 aa30.23■■■□□ 2.43
PRPF31-209ENST00000498612 CHIC1Q5VXU3 224 aa30.23■■■□□ 2.43
PRPF31-209ENST00000498612 ARAP1Q96P48 1450 aa30.2■■■□□ 2.43
PRPF31-209ENST00000498612 ERCC6L2Q5T890 1561 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms