RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 NISCHQ9Y2I1 1504 aa34.25■■■■□ 3.07
SHANK2-217ENST00000498519 ABCC9O60706 1549 aa30.96■■■□□ 2.55
SHANK2-217ENST00000498519 CCDC180Q9P1Z9 1646 aa30.76■■■□□ 2.51
SHANK2-217ENST00000498519 RB1CC1Q8TDY2 1594 aa29.44■■■□□ 2.3
SHANK2-217ENST00000498519 NACADO15069 1562 aa29.22■■■□□ 2.27
SHANK2-217ENST00000498519 DNAJC5BQ9UF47 199 aa29.16■■■□□ 2.26
SHANK2-217ENST00000498519 DCAF8L2P0C7V8 631 aa29.08■■■□□ 2.25
SHANK2-217ENST00000498519 PABPN1Q86U42 306 aaKnown RBP eCLIP28.83■■■□□ 2.21
SHANK2-217ENST00000498519 MYO15BQ96JP2 1530 aa28.81■■■□□ 2.2
SHANK2-217ENST00000498519 UNC13AQ9UPW8 1703 aa28.46■■■□□ 2.15
SHANK2-217ENST00000498519 BICRAQ9NZM4 1560 aa28.45■■■□□ 2.15
SHANK2-217ENST00000498519 DCAF1Q9Y4B6 1507 aa28.35■■■□□ 2.13
SHANK2-217ENST00000498519 ZCCHC6Q5VYS8 1495 aaKnown RBP28.34■■■□□ 2.13
SHANK2-217ENST00000498519 SHROOM4Q9ULL8 1493 aa28.3■■■□□ 2.12
SHANK2-217ENST00000498519 SCRIBQ14160 1630 aa27.97■■■□□ 2.07
SHANK2-217ENST00000498519 CECR2Q9BXF3 1484 aa27.96■■■□□ 2.07
SHANK2-217ENST00000498519 CC2D2AQ9P2K1 1620 aa27.92■■■□□ 2.06
SHANK2-217ENST00000498519 EIF4G1Q04637 1599 aaKnown RBP27.86■■■□□ 2.05
SHANK2-217ENST00000498519 DNAJC5Q9H3Z4 198 aa27.06■■□□□ 1.92
SHANK2-217ENST00000498519 NCAPD3P42695 1498 aa27■■□□□ 1.91
SHANK2-217ENST00000498519 CUX2O14529 1486 aa26.86■■□□□ 1.89
SHANK2-217ENST00000498519 ERCC6Q03468 1493 aa26.85■■□□□ 1.89
SHANK2-217ENST00000498519 ATAD2BQ9ULI0 1458 aa26.85■■□□□ 1.89
SHANK2-217ENST00000498519 SMARCA2P51531 1590 aa26.8■■□□□ 1.88
SHANK2-217ENST00000498519 HMGXB3Q12766 1538 aa26.74■■□□□ 1.87
SHANK2-217ENST00000498519 SMARCA4P51532 1647 aa26.69■■□□□ 1.86
SHANK2-217ENST00000498519 BAZ1AQ9NRL2 1556 aaPredicted RBP26.64■■□□□ 1.86
SHANK2-217ENST00000498519 BAZ1BQ9UIG0 1483 aaKnown RBP26.61■■□□□ 1.85
SHANK2-217ENST00000498519 PEG3Q9GZU2 1588 aa26.5■■□□□ 1.83
SHANK2-217ENST00000498519 NESP48681 1621 aa26.49■■□□□ 1.83
SHANK2-217ENST00000498519 LAMC3Q9Y6N6 1575 aa26.37■■□□□ 1.81
SHANK2-217ENST00000498519 PDS5BQ9NTI5 1447 aa26.34■■□□□ 1.81
SHANK2-217ENST00000498519 MROH2BQ7Z745 1585 aa26.33■■□□□ 1.8
SHANK2-217ENST00000498519 THOC2Q8NI27 1593 aaKnown RBP26.24■■□□□ 1.79
SHANK2-217ENST00000498519 CADPSQ9ULU8 1353 aa26.2■■□□□ 1.78
SHANK2-217ENST00000498519 KIF21AQ7Z4S6 1674 aa26.05■■□□□ 1.76
SHANK2-217ENST00000498519 MRC2Q9UBG0 1479 aa26.04■■□□□ 1.76
SHANK2-217ENST00000498519 WDR62O43379 1518 aa25.93■■□□□ 1.74
SHANK2-217ENST00000498519 WIZO95785 1651 aa25.93■■□□□ 1.74
SHANK2-217ENST00000498519 CEP164Q9UPV0 1460 aa25.9■■□□□ 1.74
SHANK2-217ENST00000498519 FANCD2Q9BXW9 1451 aa25.85■■□□□ 1.73
SHANK2-217ENST00000498519 CFTRP13569 1480 aa25.82■■□□□ 1.72
SHANK2-217ENST00000498519 RSF1Q96T23 1441 aaPredicted RBP25.8■■□□□ 1.72
SHANK2-217ENST00000498519 TRIM41Q8WV44 630 aa25.76■■□□□ 1.71
SHANK2-217ENST00000498519 TOP2AP11388 1531 aaKnown RBP25.71■■□□□ 1.71
SHANK2-217ENST00000498519 OSCARQ8IYS5 282 aa25.67■■□□□ 1.7
SHANK2-217ENST00000498519 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.68
SHANK2-217ENST00000498519 CCDC88BA6NC98 1476 aa25.43■■□□□ 1.66
SHANK2-217ENST00000498519 IFT140Q96RY7 1462 aa25.42■■□□□ 1.66
SHANK2-217ENST00000498519 ABCC8Q09428 1581 aa25.37■■□□□ 1.65
SHANK2-217ENST00000498519 PRDM2Q13029 1718 aa25.32■■□□□ 1.64
SHANK2-217ENST00000498519 TOPBP1Q92547 1522 aa25.3■■□□□ 1.64
SHANK2-217ENST00000498519 ZNF608Q9ULD9 1512 aaPredicted RBP25.28■■□□□ 1.64
SHANK2-217ENST00000498519 DNMBPQ6XZF7 1577 aa25.19■■□□□ 1.62
SHANK2-217ENST00000498519 RIMBP3CA6NJZ7 1639 aa25.13■■□□□ 1.61
SHANK2-217ENST00000498519 RIMBP3BA6NNM3 1639 aa25.13■■□□□ 1.61
SHANK2-217ENST00000498519 RIMBP3Q9UFD9 1639 aa25.13■■□□□ 1.61
SHANK2-217ENST00000498519 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
SHANK2-217ENST00000498519 EIF4G3O43432 1585 aaKnown RBP25.1■■□□□ 1.61
SHANK2-217ENST00000498519 AQRO60306 1485 aaKnown RBP eCLIP25.07■■□□□ 1.6
SHANK2-217ENST00000498519 FBLN2P98095 1184 aa25.04■■□□□ 1.6
SHANK2-217ENST00000498519 POLA1P09884 1462 aaPredicted RBP25.03■■□□□ 1.6
SHANK2-217ENST00000498519 TARBP1Q13395 1621 aaKnown RBP25.02■■□□□ 1.6
SHANK2-217ENST00000498519 CYB5RLQ6IPT4 315 aa25.02■■□□□ 1.6
SHANK2-217ENST00000498519 SOGA1O94964 1423 aa24.98■■□□□ 1.59
SHANK2-217ENST00000498519 TDRD9Q8NDG6 1382 aaKnown RBP24.93■■□□□ 1.58
SHANK2-217ENST00000498519 RAD54L2Q9Y4B4 1467 aa24.91■■□□□ 1.58
SHANK2-217ENST00000498519 WDR97A6NE52 1622 aa24.89■■□□□ 1.57
SHANK2-217ENST00000498519 CHMP7Q8WUX9 453 aaPredicted RBP24.87■■□□□ 1.57
SHANK2-217ENST00000498519 CHD1O14646 1710 aa24.85■■□□□ 1.57
SHANK2-217ENST00000498519 FGD5Q6ZNL6 1462 aa24.84■■□□□ 1.57
SHANK2-217ENST00000498519 ARAP1Q96P48 1450 aa24.83■■□□□ 1.57
SHANK2-217ENST00000498519 TRHP20396 242 aaPredicted RBP24.83■■□□□ 1.57
SHANK2-217ENST00000498519 SNAPC4Q5SXM2 1469 aa24.81■■□□□ 1.56
SHANK2-217ENST00000498519 MAGI1Q96QZ7 1491 aaPredicted RBP24.81■■□□□ 1.56
SHANK2-217ENST00000498519 GRIN2BQ13224 1484 aa24.79■■□□□ 1.56
SHANK2-217ENST00000498519 CUX1P39880 1505 aa24.76■■□□□ 1.55
SHANK2-217ENST00000498519 SYNJ1O43426 1573 aa24.73■■□□□ 1.55
SHANK2-217ENST00000498519 SYNJ2O15056 1496 aa24.72■■□□□ 1.55
SHANK2-217ENST00000498519 CLASP1Q7Z460 1538 aa24.69■■□□□ 1.54
SHANK2-217ENST00000498519 GAPVD1Q14C86 1478 aa24.65■■□□□ 1.54
SHANK2-217ENST00000498519 ABCA10Q8WWZ4 1543 aa24.6■■□□□ 1.53
SHANK2-217ENST00000498519 SUPT5HO00267 1087 aaKnown RBP24.55■■□□□ 1.52
SHANK2-217ENST00000498519 WRNQ14191 1432 aaPredicted RBP eCLIP24.53■■□□□ 1.52
SHANK2-217ENST00000498519 ABCA5Q8WWZ7 1642 aa24.47■■□□□ 1.51
SHANK2-217ENST00000498519 PBRM1Q86U86 1689 aa24.46■■□□□ 1.51
SHANK2-217ENST00000498519 GRIN2AQ12879 1464 aa24.43■■□□□ 1.5
SHANK2-217ENST00000498519 FHAD1B1AJZ9 1412 aa24.37■■□□□ 1.49
SHANK2-217ENST00000498519 NUP160Q12769 1436 aa24.36■■□□□ 1.49
SHANK2-217ENST00000498519 TOP2BQ02880 1626 aa24.33■■□□□ 1.49
SHANK2-217ENST00000498519 ADAMTS12P58397 1594 aa24.32■■□□□ 1.48
SHANK2-217ENST00000498519 AEBP2Q6ZN18 517 aaPredicted RBP24.3■■□□□ 1.48
SHANK2-217ENST00000498519 ERICH3Q5RHP9 1530 aa24.3■■□□□ 1.48
SHANK2-217ENST00000498519 BIVM-ERCC5R4GMW8 1640 aa24.28■■□□□ 1.48
SHANK2-217ENST00000498519 CEP170Q5SW79 1584 aa24.26■■□□□ 1.47
SHANK2-217ENST00000498519 ERCC6L2Q5T890 1561 aa24.2■■□□□ 1.47
SHANK2-217ENST00000498519 JPH4Q96JJ6 628 aa24.18■■□□□ 1.46
SHANK2-217ENST00000498519 SHROOM2Q13796 1616 aa24.17■■□□□ 1.46
SHANK2-217ENST00000498519 PRG4Q92954 1404 aaPredicted RBP24.16■■□□□ 1.46
SHANK2-217ENST00000498519 NPM1P06748 294 aaKnown RBP eCLIP24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms