RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 NISCHQ9Y2I1 1504 aa35.34■■■■□ 3.25
CCDC58-207ENST00000498466 ABCC9O60706 1549 aa32.24■■■□□ 2.75
CCDC58-207ENST00000498466 CCDC180Q9P1Z9 1646 aa31.82■■■□□ 2.68
CCDC58-207ENST00000498466 DNAJC5BQ9UF47 199 aa30.54■■■□□ 2.48
CCDC58-207ENST00000498466 RB1CC1Q8TDY2 1594 aa30.5■■■□□ 2.47
CCDC58-207ENST00000498466 NACADO15069 1562 aa30.2■■■□□ 2.42
CCDC58-207ENST00000498466 DCAF8L2P0C7V8 631 aa30.09■■■□□ 2.41
CCDC58-207ENST00000498466 PABPN1Q86U42 306 aaKnown RBP eCLIP29.99■■■□□ 2.39
CCDC58-207ENST00000498466 UNC13AQ9UPW8 1703 aa29.73■■■□□ 2.35
CCDC58-207ENST00000498466 MYO15BQ96JP2 1530 aa29.65■■■□□ 2.34
CCDC58-207ENST00000498466 BICRAQ9NZM4 1560 aa29.6■■■□□ 2.33
CCDC58-207ENST00000498466 ZCCHC6Q5VYS8 1495 aaKnown RBP29.22■■■□□ 2.27
CCDC58-207ENST00000498466 SHROOM4Q9ULL8 1493 aa29.17■■■□□ 2.26
CCDC58-207ENST00000498466 DCAF1Q9Y4B6 1507 aa29.15■■■□□ 2.26
CCDC58-207ENST00000498466 CECR2Q9BXF3 1484 aa29.08■■■□□ 2.25
CCDC58-207ENST00000498466 CC2D2AQ9P2K1 1620 aa29.07■■■□□ 2.24
CCDC58-207ENST00000498466 SCRIBQ14160 1630 aa29.03■■■□□ 2.24
CCDC58-207ENST00000498466 EIF4G1Q04637 1599 aaKnown RBP28.92■■■□□ 2.22
CCDC58-207ENST00000498466 DNAJC5Q9H3Z4 198 aa28.3■■■□□ 2.12
CCDC58-207ENST00000498466 CUX2O14529 1486 aa27.9■■■□□ 2.06
CCDC58-207ENST00000498466 NCAPD3P42695 1498 aa27.89■■■□□ 2.06
CCDC58-207ENST00000498466 ERCC6Q03468 1493 aa27.89■■■□□ 2.05
CCDC58-207ENST00000498466 ATAD2BQ9ULI0 1458 aa27.77■■■□□ 2.04
CCDC58-207ENST00000498466 SMARCA2P51531 1590 aa27.66■■■□□ 2.02
CCDC58-207ENST00000498466 HMGXB3Q12766 1538 aa27.64■■■□□ 2.02
CCDC58-207ENST00000498466 SMARCA4P51532 1647 aa27.63■■■□□ 2.01
CCDC58-207ENST00000498466 NESP48681 1621 aa27.58■■■□□ 2.01
CCDC58-207ENST00000498466 BAZ1BQ9UIG0 1483 aaKnown RBP27.5■■□□□ 1.99
CCDC58-207ENST00000498466 BAZ1AQ9NRL2 1556 aaPredicted RBP27.46■■□□□ 1.99
CCDC58-207ENST00000498466 PEG3Q9GZU2 1588 aa27.35■■□□□ 1.97
CCDC58-207ENST00000498466 THOC2Q8NI27 1593 aaKnown RBP27.34■■□□□ 1.97
CCDC58-207ENST00000498466 LAMC3Q9Y6N6 1575 aa27.31■■□□□ 1.96
CCDC58-207ENST00000498466 MROH2BQ7Z745 1585 aa27.23■■□□□ 1.95
CCDC58-207ENST00000498466 PDS5BQ9NTI5 1447 aa27.21■■□□□ 1.95
CCDC58-207ENST00000498466 KIF21AQ7Z4S6 1674 aa27.17■■□□□ 1.94
CCDC58-207ENST00000498466 CADPSQ9ULU8 1353 aa27.06■■□□□ 1.92
CCDC58-207ENST00000498466 TRIM41Q8WV44 630 aa26.98■■□□□ 1.91
CCDC58-207ENST00000498466 MRC2Q9UBG0 1479 aa26.98■■□□□ 1.91
CCDC58-207ENST00000498466 AEBP2Q6ZN18 517 aaPredicted RBP26.94■■□□□ 1.9
CCDC58-207ENST00000498466 WDR62O43379 1518 aa26.9■■□□□ 1.9
CCDC58-207ENST00000498466 WIZO95785 1651 aa26.88■■□□□ 1.89
CCDC58-207ENST00000498466 CEP164Q9UPV0 1460 aa26.81■■□□□ 1.88
CCDC58-207ENST00000498466 FANCD2Q9BXW9 1451 aa26.75■■□□□ 1.87
CCDC58-207ENST00000498466 CFTRP13569 1480 aa26.66■■□□□ 1.86
CCDC58-207ENST00000498466 OSCARQ8IYS5 282 aa26.61■■□□□ 1.85
CCDC58-207ENST00000498466 RSF1Q96T23 1441 aaPredicted RBP26.56■■□□□ 1.84
CCDC58-207ENST00000498466 URB2Q14146 1524 aaKnown RBP26.53■■□□□ 1.84
CCDC58-207ENST00000498466 TOP2AP11388 1531 aaKnown RBP26.52■■□□□ 1.84
CCDC58-207ENST00000498466 IFT140Q96RY7 1462 aa26.28■■□□□ 1.8
CCDC58-207ENST00000498466 ZNF608Q9ULD9 1512 aaPredicted RBP26.28■■□□□ 1.8
CCDC58-207ENST00000498466 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
CCDC58-207ENST00000498466 RIMBP3CA6NJZ7 1639 aa26.25■■□□□ 1.79
CCDC58-207ENST00000498466 RIMBP3BA6NNM3 1639 aa26.25■■□□□ 1.79
CCDC58-207ENST00000498466 RIMBP3Q9UFD9 1639 aa26.25■■□□□ 1.79
CCDC58-207ENST00000498466 CCDC88BA6NC98 1476 aa26.24■■□□□ 1.79
CCDC58-207ENST00000498466 TOPBP1Q92547 1522 aa26.19■■□□□ 1.78
CCDC58-207ENST00000498466 ARHGEF11O15085 1522 aa26.16■■□□□ 1.78
CCDC58-207ENST00000498466 ABCC8Q09428 1581 aa26.11■■□□□ 1.77
CCDC58-207ENST00000498466 EIF4G3O43432 1585 aaKnown RBP26.09■■□□□ 1.77
CCDC58-207ENST00000498466 DNMBPQ6XZF7 1577 aa26.05■■□□□ 1.76
CCDC58-207ENST00000498466 CYB5RLQ6IPT4 315 aa26.04■■□□□ 1.76
CCDC58-207ENST00000498466 AQRO60306 1485 aaKnown RBP eCLIP26.01■■□□□ 1.75
CCDC58-207ENST00000498466 FBLN2P98095 1184 aa25.96■■□□□ 1.75
CCDC58-207ENST00000498466 TARBP1Q13395 1621 aaKnown RBP25.96■■□□□ 1.75
CCDC58-207ENST00000498466 CHD1O14646 1710 aa25.94■■□□□ 1.74
CCDC58-207ENST00000498466 POLA1P09884 1462 aaPredicted RBP25.91■■□□□ 1.74
CCDC58-207ENST00000498466 TRHP20396 242 aaPredicted RBP25.89■■□□□ 1.74
CCDC58-207ENST00000498466 ARAP1Q96P48 1450 aa25.88■■□□□ 1.73
CCDC58-207ENST00000498466 RAD54L2Q9Y4B4 1467 aa25.83■■□□□ 1.73
CCDC58-207ENST00000498466 TDRD9Q8NDG6 1382 aaKnown RBP25.81■■□□□ 1.72
CCDC58-207ENST00000498466 SOGA1O94964 1423 aa25.8■■□□□ 1.72
CCDC58-207ENST00000498466 SNAPC4Q5SXM2 1469 aa25.73■■□□□ 1.71
CCDC58-207ENST00000498466 CHMP7Q8WUX9 453 aaPredicted RBP25.7■■□□□ 1.7
CCDC58-207ENST00000498466 FGD5Q6ZNL6 1462 aa25.7■■□□□ 1.7
CCDC58-207ENST00000498466 WDR97A6NE52 1622 aa25.66■■□□□ 1.7
CCDC58-207ENST00000498466 CHIC1Q5VXU3 224 aa25.66■■□□□ 1.7
CCDC58-207ENST00000498466 CLASP1Q7Z460 1538 aa25.65■■□□□ 1.7
CCDC58-207ENST00000498466 MAGI1Q96QZ7 1491 aaPredicted RBP25.63■■□□□ 1.69
CCDC58-207ENST00000498466 SYNJ1O43426 1573 aa25.63■■□□□ 1.69
CCDC58-207ENST00000498466 CUX1P39880 1505 aa25.61■■□□□ 1.69
CCDC58-207ENST00000498466 GRIN2BQ13224 1484 aa25.6■■□□□ 1.69
CCDC58-207ENST00000498466 SYNJ2O15056 1496 aa25.56■■□□□ 1.68
CCDC58-207ENST00000498466 GAPVD1Q14C86 1478 aa25.47■■□□□ 1.67
CCDC58-207ENST00000498466 PBRM1Q86U86 1689 aa25.43■■□□□ 1.66
CCDC58-207ENST00000498466 ABCA10Q8WWZ4 1543 aa25.37■■□□□ 1.65
CCDC58-207ENST00000498466 ABCA5Q8WWZ7 1642 aa25.34■■□□□ 1.65
CCDC58-207ENST00000498466 GRIN2AQ12879 1464 aa25.27■■□□□ 1.64
CCDC58-207ENST00000498466 ERCC6L2Q5T890 1561 aa25.24■■□□□ 1.63
CCDC58-207ENST00000498466 WRNQ14191 1432 aaPredicted RBP eCLIP25.23■■□□□ 1.63
CCDC58-207ENST00000498466 ADAMTS12P58397 1594 aa25.19■■□□□ 1.62
CCDC58-207ENST00000498466 SUPT5HO00267 1087 aaKnown RBP25.19■■□□□ 1.62
CCDC58-207ENST00000498466 NUP160Q12769 1436 aa25.19■■□□□ 1.62
CCDC58-207ENST00000498466 CEP170Q5SW79 1584 aa25.18■■□□□ 1.62
CCDC58-207ENST00000498466 FHAD1B1AJZ9 1412 aa25.13■■□□□ 1.61
CCDC58-207ENST00000498466 TOP2BQ02880 1626 aa25.08■■□□□ 1.61
CCDC58-207ENST00000498466 SHROOM2Q13796 1616 aa25.08■■□□□ 1.6
CCDC58-207ENST00000498466 BIVM-ERCC5R4GMW8 1640 aa25.08■■□□□ 1.6
CCDC58-207ENST00000498466 ERICH3Q5RHP9 1530 aa25.05■■□□□ 1.6
CCDC58-207ENST00000498466 PRG4Q92954 1404 aaPredicted RBP25.01■■□□□ 1.59
CCDC58-207ENST00000498466 JPH4Q96JJ6 628 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms