RNA–Protein interactions for RNA: ENST00000498449.5

SYNPR-215, Transcript of synaptoporin, humanhuman

TSL 2

Gene SYNPR, Length 1,296 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPR-215ENST00000498449 NISCHQ9Y2I1 1504 aa32.26■■■□□ 2.76
SYNPR-215ENST00000498449 CCDC180Q9P1Z9 1646 aa28.44■■■□□ 2.14
SYNPR-215ENST00000498449 ABCC9O60706 1549 aa27.14■■□□□ 1.94
SYNPR-215ENST00000498449 ZCCHC6Q5VYS8 1495 aaKnown RBP27.03■■□□□ 1.92
SYNPR-215ENST00000498449 DCAF1Q9Y4B6 1507 aa26.72■■□□□ 1.87
SYNPR-215ENST00000498449 DCAF8L2P0C7V8 631 aa26.61■■□□□ 1.85
SYNPR-215ENST00000498449 MYO15BQ96JP2 1530 aa26.57■■□□□ 1.84
SYNPR-215ENST00000498449 NACADO15069 1562 aa26.53■■□□□ 1.84
SYNPR-215ENST00000498449 RB1CC1Q8TDY2 1594 aa26.41■■□□□ 1.82
SYNPR-215ENST00000498449 SCRIBQ14160 1630 aa26■■□□□ 1.75
SYNPR-215ENST00000498449 UNC13AQ9UPW8 1703 aa25.93■■□□□ 1.74
SYNPR-215ENST00000498449 SHROOM4Q9ULL8 1493 aa25.89■■□□□ 1.73
SYNPR-215ENST00000498449 BICRAQ9NZM4 1560 aa25.62■■□□□ 1.69
SYNPR-215ENST00000498449 PABPN1Q86U42 306 aaKnown RBP eCLIP25.43■■□□□ 1.66
SYNPR-215ENST00000498449 CECR2Q9BXF3 1484 aa25.06■■□□□ 1.6
SYNPR-215ENST00000498449 BAZ1AQ9NRL2 1556 aaPredicted RBP24.97■■□□□ 1.59
SYNPR-215ENST00000498449 SMARCA4P51532 1647 aa24.94■■□□□ 1.58
SYNPR-215ENST00000498449 MROH2BQ7Z745 1585 aa24.89■■□□□ 1.58
SYNPR-215ENST00000498449 EIF4G1Q04637 1599 aaKnown RBP24.87■■□□□ 1.57
SYNPR-215ENST00000498449 RSF1Q96T23 1441 aaPredicted RBP24.82■■□□□ 1.56
SYNPR-215ENST00000498449 WIZO95785 1651 aa24.69■■□□□ 1.54
SYNPR-215ENST00000498449 SUPT5HO00267 1087 aaKnown RBP24.66■■□□□ 1.54
SYNPR-215ENST00000498449 PEG3Q9GZU2 1588 aa24.65■■□□□ 1.54
SYNPR-215ENST00000498449 CC2D2AQ9P2K1 1620 aa24.61■■□□□ 1.53
SYNPR-215ENST00000498449 SMARCA2P51531 1590 aa24.59■■□□□ 1.53
SYNPR-215ENST00000498449 ATAD2BQ9ULI0 1458 aa24.58■■□□□ 1.52
SYNPR-215ENST00000498449 NCAPD3P42695 1498 aa24.45■■□□□ 1.5
SYNPR-215ENST00000498449 TOP2AP11388 1531 aaKnown RBP24.44■■□□□ 1.5
SYNPR-215ENST00000498449 HMGXB3Q12766 1538 aa24.43■■□□□ 1.5
SYNPR-215ENST00000498449 BAZ1BQ9UIG0 1483 aaKnown RBP24.42■■□□□ 1.5
SYNPR-215ENST00000498449 DNAJC5BQ9UF47 199 aa24.26■■□□□ 1.47
SYNPR-215ENST00000498449 CCDC88BA6NC98 1476 aa24.13■■□□□ 1.45
SYNPR-215ENST00000498449 PRDM2Q13029 1718 aa23.79■■□□□ 1.4
SYNPR-215ENST00000498449 CFTRP13569 1480 aa23.78■■□□□ 1.4
SYNPR-215ENST00000498449 CADPSQ9ULU8 1353 aa23.77■■□□□ 1.4
SYNPR-215ENST00000498449 LAMC3Q9Y6N6 1575 aa23.74■■□□□ 1.39
SYNPR-215ENST00000498449 NESP48681 1621 aa23.7■■□□□ 1.38
SYNPR-215ENST00000498449 FANCD2Q9BXW9 1451 aa23.51■■□□□ 1.35
SYNPR-215ENST00000498449 PDS5BQ9NTI5 1447 aa23.5■■□□□ 1.35
SYNPR-215ENST00000498449 KIF21AQ7Z4S6 1674 aa23.5■■□□□ 1.35
SYNPR-215ENST00000498449 ABCC8Q09428 1581 aa23.49■■□□□ 1.35
SYNPR-215ENST00000498449 CEP164Q9UPV0 1460 aa23.43■■□□□ 1.34
SYNPR-215ENST00000498449 CHIC1Q5VXU3 224 aa23.42■■□□□ 1.34
SYNPR-215ENST00000498449 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
SYNPR-215ENST00000498449 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
SYNPR-215ENST00000498449 BIVM-ERCC5R4GMW8 1640 aa23.32■■□□□ 1.32
SYNPR-215ENST00000498449 CUX1P39880 1505 aa23.32■■□□□ 1.32
SYNPR-215ENST00000498449 ERCC6Q03468 1493 aa23.31■■□□□ 1.32
SYNPR-215ENST00000498449 TOP2BQ02880 1626 aa23.3■■□□□ 1.32
SYNPR-215ENST00000498449 DNMBPQ6XZF7 1577 aa23.28■■□□□ 1.32
SYNPR-215ENST00000498449 MRC2Q9UBG0 1479 aa23.26■■□□□ 1.31
SYNPR-215ENST00000498449 URB2Q14146 1524 aaKnown RBP23.26■■□□□ 1.31
SYNPR-215ENST00000498449 TRIM41Q8WV44 630 aa23.25■■□□□ 1.31
SYNPR-215ENST00000498449 THOC2Q8NI27 1593 aaKnown RBP23.23■■□□□ 1.31
SYNPR-215ENST00000498449 TOPBP1Q92547 1522 aa23.23■■□□□ 1.31
SYNPR-215ENST00000498449 WDR62O43379 1518 aa23.18■■□□□ 1.3
SYNPR-215ENST00000498449 FGD5Q6ZNL6 1462 aa23.12■■□□□ 1.29
SYNPR-215ENST00000498449 POLA1P09884 1462 aaPredicted RBP23.07■■□□□ 1.28
SYNPR-215ENST00000498449 WDR97A6NE52 1622 aa22.97■■□□□ 1.27
SYNPR-215ENST00000498449 CUX2O14529 1486 aa22.97■■□□□ 1.27
SYNPR-215ENST00000498449 RAD54L2Q9Y4B4 1467 aa22.97■■□□□ 1.27
SYNPR-215ENST00000498449 TARBP1Q13395 1621 aaKnown RBP22.96■■□□□ 1.27
SYNPR-215ENST00000498449 SOGA1O94964 1423 aa22.95■■□□□ 1.26
SYNPR-215ENST00000498449 ABCA10Q8WWZ4 1543 aa22.92■■□□□ 1.26
SYNPR-215ENST00000498449 IFT140Q96RY7 1462 aa22.89■■□□□ 1.25
SYNPR-215ENST00000498449 RUSC2Q8N2Y8 1516 aa22.87■■□□□ 1.25
SYNPR-215ENST00000498449 EEA1Q15075 1411 aa22.84■■□□□ 1.25
SYNPR-215ENST00000498449 KIF27Q86VH2 1401 aa22.83■■□□□ 1.25
SYNPR-215ENST00000498449 ABCA5Q8WWZ7 1642 aa22.82■■□□□ 1.24
SYNPR-215ENST00000498449 FAM9AQ8IZU1 332 aaPredicted RBP22.78■■□□□ 1.24
SYNPR-215ENST00000498449 ZNF608Q9ULD9 1512 aaPredicted RBP22.76■■□□□ 1.23
SYNPR-215ENST00000498449 TDRD9Q8NDG6 1382 aaKnown RBP22.75■■□□□ 1.23
SYNPR-215ENST00000498449 EIF4G3O43432 1585 aaKnown RBP22.73■■□□□ 1.23
SYNPR-215ENST00000498449 GAPVD1Q14C86 1478 aa22.73■■□□□ 1.23
SYNPR-215ENST00000498449 PBRM1Q86U86 1689 aa22.72■■□□□ 1.23
SYNPR-215ENST00000498449 AQRO60306 1485 aaKnown RBP eCLIP22.69■■□□□ 1.22
SYNPR-215ENST00000498449 CSRNP3Q8WYN3 585 aa22.68■■□□□ 1.22
SYNPR-215ENST00000498449 ERICH3Q5RHP9 1530 aa22.66■■□□□ 1.22
SYNPR-215ENST00000498449 IGF1RP08069 1367 aa22.64■■□□□ 1.22
SYNPR-215ENST00000498449 GRIN2BQ13224 1484 aa22.62■■□□□ 1.21
SYNPR-215ENST00000498449 CUL7Q14999 1698 aa22.62■■□□□ 1.21
SYNPR-215ENST00000498449 KIF21BO75037 1637 aa22.61■■□□□ 1.21
SYNPR-215ENST00000498449 PRXQ9BXM0 1461 aa22.58■■□□□ 1.2
SYNPR-215ENST00000498449 ADAMTS12P58397 1594 aa22.55■■□□□ 1.2
SYNPR-215ENST00000498449 SNAPC4Q5SXM2 1469 aa22.53■■□□□ 1.2
SYNPR-215ENST00000498449 CARMIL1Q5VZK9 1371 aa22.52■■□□□ 1.2
SYNPR-215ENST00000498449 GOLGA3Q08378 1498 aa22.5■■□□□ 1.19
SYNPR-215ENST00000498449 MAGI1Q96QZ7 1491 aaPredicted RBP22.5■■□□□ 1.19
SYNPR-215ENST00000498449 RAPGEF2Q9Y4G8 1499 aa22.48■■□□□ 1.19
SYNPR-215ENST00000498449 FHAD1B1AJZ9 1412 aa22.48■■□□□ 1.19
SYNPR-215ENST00000498449 LOC105371045A0A1W2PR82 267 aa22.45■■□□□ 1.18
SYNPR-215ENST00000498449 EHMT2Q96KQ7 1210 aa22.43■■□□□ 1.18
SYNPR-215ENST00000498449 SYNJ2O15056 1496 aa22.4■■□□□ 1.18
SYNPR-215ENST00000498449 CHD1O14646 1710 aa22.37■■□□□ 1.17
SYNPR-215ENST00000498449 GRIN2AQ12879 1464 aa22.35■■□□□ 1.17
SYNPR-215ENST00000498449 CTTNBP2Q8WZ74 1663 aa22.33■■□□□ 1.17
SYNPR-215ENST00000498449 UBTFP17480 764 aaKnown RBP22.32■■□□□ 1.16
SYNPR-215ENST00000498449 TNIKQ9UKE5 1360 aa22.31■■□□□ 1.16
SYNPR-215ENST00000498449 CHMP7Q8WUX9 453 aaPredicted RBP22.28■■□□□ 1.16
SYNPR-215ENST00000498449 FBLN2P98095 1184 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 322.8 ms