RNA–Protein interactions for RNA: ENST00000498251.2

CACNA1D-207, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-207ENST00000498251 NISCHQ9Y2I1 1504 aa26.24■■□□□ 1.79
CACNA1D-207ENST00000498251 ABCC9O60706 1549 aa24.36■■□□□ 1.49
CACNA1D-207ENST00000498251 CCDC180Q9P1Z9 1646 aa23.62■■□□□ 1.37
CACNA1D-207ENST00000498251 DNAJC5BQ9UF47 199 aa23.3■■□□□ 1.32
CACNA1D-207ENST00000498251 RB1CC1Q8TDY2 1594 aa22.79■■□□□ 1.24
CACNA1D-207ENST00000498251 AEBP2Q6ZN18 517 aaPredicted RBP22.74■■□□□ 1.23
CACNA1D-207ENST00000498251 PABPN1Q86U42 306 aaKnown RBP eCLIP22.7■■□□□ 1.22
CACNA1D-207ENST00000498251 DCAF8L2P0C7V8 631 aa22.66■■□□□ 1.22
CACNA1D-207ENST00000498251 NACADO15069 1562 aa22.47■■□□□ 1.19
CACNA1D-207ENST00000498251 UNC13AQ9UPW8 1703 aa22.33■■□□□ 1.17
CACNA1D-207ENST00000498251 BICRAQ9NZM4 1560 aa22.2■■□□□ 1.14
CACNA1D-207ENST00000498251 CECR2Q9BXF3 1484 aa21.91■■□□□ 1.1
CACNA1D-207ENST00000498251 MYO15BQ96JP2 1530 aa21.88■■□□□ 1.09
CACNA1D-207ENST00000498251 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
CACNA1D-207ENST00000498251 SCRIBQ14160 1630 aa21.76■■□□□ 1.07
CACNA1D-207ENST00000498251 EIF4G1Q04637 1599 aaKnown RBP21.69■■□□□ 1.06
CACNA1D-207ENST00000498251 ZCCHC6Q5VYS8 1495 aaKnown RBP21.64■■□□□ 1.05
CACNA1D-207ENST00000498251 SHROOM4Q9ULL8 1493 aa21.61■■□□□ 1.05
CACNA1D-207ENST00000498251 DNAJC5Q9H3Z4 198 aa21.59■■□□□ 1.05
CACNA1D-207ENST00000498251 CHIC1Q5VXU3 224 aa21.52■■□□□ 1.04
CACNA1D-207ENST00000498251 DCAF1Q9Y4B6 1507 aa21.49■■□□□ 1.03
CACNA1D-207ENST00000498251 ERCC6Q03468 1493 aa21.02■□□□□ 0.96
CACNA1D-207ENST00000498251 CUX2O14529 1486 aa20.98■□□□□ 0.95
CACNA1D-207ENST00000498251 NESP48681 1621 aa20.81■□□□□ 0.92
CACNA1D-207ENST00000498251 NCAPD3P42695 1498 aa20.77■□□□□ 0.92
CACNA1D-207ENST00000498251 ATAD2BQ9ULI0 1458 aa20.72■□□□□ 0.91
CACNA1D-207ENST00000498251 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
CACNA1D-207ENST00000498251 SMARCA4P51532 1647 aa20.58■□□□□ 0.89
CACNA1D-207ENST00000498251 SMARCA2P51531 1590 aa20.57■□□□□ 0.88
CACNA1D-207ENST00000498251 HMGXB3Q12766 1538 aa20.56■□□□□ 0.88
CACNA1D-207ENST00000498251 THOC2Q8NI27 1593 aaKnown RBP20.55■□□□□ 0.88
CACNA1D-207ENST00000498251 BAZ1BQ9UIG0 1483 aaKnown RBP20.53■□□□□ 0.88
CACNA1D-207ENST00000498251 KIF21AQ7Z4S6 1674 aa20.44■□□□□ 0.86
CACNA1D-207ENST00000498251 BAZ1AQ9NRL2 1556 aaPredicted RBP20.37■□□□□ 0.85
CACNA1D-207ENST00000498251 LAMC3Q9Y6N6 1575 aa20.37■□□□□ 0.85
CACNA1D-207ENST00000498251 MROH2BQ7Z745 1585 aa20.31■□□□□ 0.84
CACNA1D-207ENST00000498251 PDS5BQ9NTI5 1447 aa20.31■□□□□ 0.84
CACNA1D-207ENST00000498251 PEG3Q9GZU2 1588 aa20.25■□□□□ 0.83
CACNA1D-207ENST00000498251 MRC2Q9UBG0 1479 aa20.2■□□□□ 0.82
CACNA1D-207ENST00000498251 CADPSQ9ULU8 1353 aa20.19■□□□□ 0.82
CACNA1D-207ENST00000498251 WDR62O43379 1518 aa20.12■□□□□ 0.81
CACNA1D-207ENST00000498251 WIZO95785 1651 aa20.06■□□□□ 0.8
CACNA1D-207ENST00000498251 OSCARQ8IYS5 282 aa20.05■□□□□ 0.8
CACNA1D-207ENST00000498251 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
CACNA1D-207ENST00000498251 FANCD2Q9BXW9 1451 aa20■□□□□ 0.79
CACNA1D-207ENST00000498251 URB2Q14146 1524 aaKnown RBP19.89■□□□□ 0.77
CACNA1D-207ENST00000498251 RIMBP3CA6NJZ7 1639 aa19.86■□□□□ 0.77
CACNA1D-207ENST00000498251 RIMBP3BA6NNM3 1639 aa19.86■□□□□ 0.77
CACNA1D-207ENST00000498251 RIMBP3Q9UFD9 1639 aa19.86■□□□□ 0.77
CACNA1D-207ENST00000498251 CFTRP13569 1480 aa19.83■□□□□ 0.76
CACNA1D-207ENST00000498251 ZNF608Q9ULD9 1512 aaPredicted RBP19.77■□□□□ 0.76
CACNA1D-207ENST00000498251 ARHGEF11O15085 1522 aa19.73■□□□□ 0.75
CACNA1D-207ENST00000498251 CYB5RLQ6IPT4 315 aa19.73■□□□□ 0.75
CACNA1D-207ENST00000498251 TRHP20396 242 aaPredicted RBP19.7■□□□□ 0.74
CACNA1D-207ENST00000498251 RSF1Q96T23 1441 aaPredicted RBP19.68■□□□□ 0.74
CACNA1D-207ENST00000498251 TOP2AP11388 1531 aaKnown RBP19.67■□□□□ 0.74
CACNA1D-207ENST00000498251 IFT140Q96RY7 1462 aa19.62■□□□□ 0.73
CACNA1D-207ENST00000498251 FBLN2P98095 1184 aa19.6■□□□□ 0.73
CACNA1D-207ENST00000498251 TOPBP1Q92547 1522 aa19.56■□□□□ 0.72
CACNA1D-207ENST00000498251 EIF4G3O43432 1585 aaKnown RBP19.56■□□□□ 0.72
CACNA1D-207ENST00000498251 AQRO60306 1485 aaKnown RBP eCLIP19.54■□□□□ 0.72
CACNA1D-207ENST00000498251 ARAP1Q96P48 1450 aa19.54■□□□□ 0.72
CACNA1D-207ENST00000498251 PRDM2Q13029 1718 aa19.53■□□□□ 0.72
CACNA1D-207ENST00000498251 CCDC88BA6NC98 1476 aa19.53■□□□□ 0.72
CACNA1D-207ENST00000498251 CHD1O14646 1710 aa19.52■□□□□ 0.72
CACNA1D-207ENST00000498251 DNMBPQ6XZF7 1577 aa19.4■□□□□ 0.7
CACNA1D-207ENST00000498251 TARBP1Q13395 1621 aaKnown RBP19.39■□□□□ 0.69
CACNA1D-207ENST00000498251 SENP3Q9H4L4 574 aaPredicted RBP19.38■□□□□ 0.69
CACNA1D-207ENST00000498251 RAD54L2Q9Y4B4 1467 aa19.38■□□□□ 0.69
CACNA1D-207ENST00000498251 TDRD9Q8NDG6 1382 aaKnown RBP19.37■□□□□ 0.69
CACNA1D-207ENST00000498251 ABCC8Q09428 1581 aa19.34■□□□□ 0.69
CACNA1D-207ENST00000498251 POLA1P09884 1462 aaPredicted RBP19.34■□□□□ 0.69
CACNA1D-207ENST00000498251 SNAPC4Q5SXM2 1469 aa19.29■□□□□ 0.68
CACNA1D-207ENST00000498251 CHMP7Q8WUX9 453 aaPredicted RBP19.27■□□□□ 0.68
CACNA1D-207ENST00000498251 SOGA1O94964 1423 aa19.26■□□□□ 0.67
CACNA1D-207ENST00000498251 CLASP1Q7Z460 1538 aa19.22■□□□□ 0.67
CACNA1D-207ENST00000498251 FGD5Q6ZNL6 1462 aa19.18■□□□□ 0.66
CACNA1D-207ENST00000498251 SYNJ1O43426 1573 aa19.16■□□□□ 0.66
CACNA1D-207ENST00000498251 PHF23Q9BUL5 403 aaPredicted RBP19.13■□□□□ 0.65
CACNA1D-207ENST00000498251 GAPVD1Q14C86 1478 aa19.1■□□□□ 0.65
CACNA1D-207ENST00000498251 GRIN2BQ13224 1484 aa19.09■□□□□ 0.65
CACNA1D-207ENST00000498251 MAGI1Q96QZ7 1491 aaPredicted RBP19.09■□□□□ 0.65
CACNA1D-207ENST00000498251 CUX1P39880 1505 aa19.09■□□□□ 0.65
CACNA1D-207ENST00000498251 SYNJ2O15056 1496 aa19.08■□□□□ 0.64
CACNA1D-207ENST00000498251 ERCC6L2Q5T890 1561 aa19.04■□□□□ 0.64
CACNA1D-207ENST00000498251 PBRM1Q86U86 1689 aa19.01■□□□□ 0.63
CACNA1D-207ENST00000498251 WDR97A6NE52 1622 aa18.98■□□□□ 0.63
CACNA1D-207ENST00000498251 CEP170Q5SW79 1584 aa18.87■□□□□ 0.61
CACNA1D-207ENST00000498251 ABCA5Q8WWZ7 1642 aa18.87■□□□□ 0.61
CACNA1D-207ENST00000498251 GRIN2AQ12879 1464 aa18.86■□□□□ 0.61
CACNA1D-207ENST00000498251 ABCA10Q8WWZ4 1543 aa18.84■□□□□ 0.61
CACNA1D-207ENST00000498251 ADAMTS12P58397 1594 aa18.79■□□□□ 0.6
CACNA1D-207ENST00000498251 KIF13AQ9H1H9 1805 aa18.79■□□□□ 0.6
CACNA1D-207ENST00000498251 NUP160Q12769 1436 aa18.78■□□□□ 0.6
CACNA1D-207ENST00000498251 FAM69CQ0P6D2 419 aa18.75■□□□□ 0.59
CACNA1D-207ENST00000498251 PRG4Q92954 1404 aaPredicted RBP18.74■□□□□ 0.59
CACNA1D-207ENST00000498251 SHROOM2Q13796 1616 aa18.72■□□□□ 0.59
CACNA1D-207ENST00000498251 SUPT5HO00267 1087 aaKnown RBP18.72■□□□□ 0.59
CACNA1D-207ENST00000498251 WRNQ14191 1432 aaPredicted RBP eCLIP18.72■□□□□ 0.59
CACNA1D-207ENST00000498251 FHAD1B1AJZ9 1412 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms