RNA–Protein interactions for RNA: ENST00000498105.1

ASIC3-209, Transcript of acid sensing ion channel subunit 3, humanhuman

TSL 2

Gene ASIC3, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC3-209ENST00000498105 NISCHQ9Y2I1 1504 aa37.28■■■■□ 3.56
ASIC3-209ENST00000498105 ABCC9O60706 1549 aa33.92■■■■□ 3.02
ASIC3-209ENST00000498105 CCDC180Q9P1Z9 1646 aa33.53■■■□□ 2.96
ASIC3-209ENST00000498105 RB1CC1Q8TDY2 1594 aa32.14■■■□□ 2.74
ASIC3-209ENST00000498105 DNAJC5BQ9UF47 199 aa32.11■■■□□ 2.73
ASIC3-209ENST00000498105 NACADO15069 1562 aa31.85■■■□□ 2.69
ASIC3-209ENST00000498105 DCAF8L2P0C7V8 631 aa31.71■■■□□ 2.67
ASIC3-209ENST00000498105 PABPN1Q86U42 306 aaKnown RBP eCLIP31.57■■■□□ 2.64
ASIC3-209ENST00000498105 MYO15BQ96JP2 1530 aa31.31■■■□□ 2.6
ASIC3-209ENST00000498105 UNC13AQ9UPW8 1703 aa31.26■■■□□ 2.59
ASIC3-209ENST00000498105 BICRAQ9NZM4 1560 aa31.16■■■□□ 2.58
ASIC3-209ENST00000498105 ZCCHC6Q5VYS8 1495 aaKnown RBP30.82■■■□□ 2.52
ASIC3-209ENST00000498105 SHROOM4Q9ULL8 1493 aa30.79■■■□□ 2.52
ASIC3-209ENST00000498105 DCAF1Q9Y4B6 1507 aa30.78■■■□□ 2.52
ASIC3-209ENST00000498105 CECR2Q9BXF3 1484 aa30.61■■■□□ 2.49
ASIC3-209ENST00000498105 CC2D2AQ9P2K1 1620 aa30.59■■■□□ 2.49
ASIC3-209ENST00000498105 SCRIBQ14160 1630 aa30.55■■■□□ 2.48
ASIC3-209ENST00000498105 EIF4G1Q04637 1599 aaKnown RBP30.45■■■□□ 2.47
ASIC3-209ENST00000498105 DNAJC5Q9H3Z4 198 aa29.78■■■□□ 2.36
ASIC3-209ENST00000498105 NCAPD3P42695 1498 aa29.42■■■□□ 2.3
ASIC3-209ENST00000498105 CUX2O14529 1486 aa29.39■■■□□ 2.3
ASIC3-209ENST00000498105 ERCC6Q03468 1493 aa29.35■■■□□ 2.29
ASIC3-209ENST00000498105 ATAD2BQ9ULI0 1458 aa29.28■■■□□ 2.28
ASIC3-209ENST00000498105 SMARCA2P51531 1590 aa29.18■■■□□ 2.26
ASIC3-209ENST00000498105 HMGXB3Q12766 1538 aa29.14■■■□□ 2.25
ASIC3-209ENST00000498105 SMARCA4P51532 1647 aa29.11■■■□□ 2.25
ASIC3-209ENST00000498105 NESP48681 1621 aa29.02■■■□□ 2.24
ASIC3-209ENST00000498105 BAZ1BQ9UIG0 1483 aaKnown RBP28.98■■■□□ 2.23
ASIC3-209ENST00000498105 BAZ1AQ9NRL2 1556 aaPredicted RBP28.97■■■□□ 2.23
ASIC3-209ENST00000498105 PEG3Q9GZU2 1588 aa28.84■■■□□ 2.21
ASIC3-209ENST00000498105 LAMC3Q9Y6N6 1575 aa28.79■■■□□ 2.2
ASIC3-209ENST00000498105 THOC2Q8NI27 1593 aaKnown RBP28.75■■■□□ 2.19
ASIC3-209ENST00000498105 PDS5BQ9NTI5 1447 aa28.7■■■□□ 2.19
ASIC3-209ENST00000498105 MROH2BQ7Z745 1585 aa28.7■■■□□ 2.18
ASIC3-209ENST00000498105 KIF21AQ7Z4S6 1674 aa28.57■■■□□ 2.16
ASIC3-209ENST00000498105 CADPSQ9ULU8 1353 aa28.54■■■□□ 2.16
ASIC3-209ENST00000498105 MRC2Q9UBG0 1479 aa28.42■■■□□ 2.14
ASIC3-209ENST00000498105 TRIM41Q8WV44 630 aa28.34■■■□□ 2.13
ASIC3-209ENST00000498105 WDR62O43379 1518 aa28.33■■■□□ 2.13
ASIC3-209ENST00000498105 WIZO95785 1651 aa28.31■■■□□ 2.12
ASIC3-209ENST00000498105 CEP164Q9UPV0 1460 aa28.25■■■□□ 2.11
ASIC3-209ENST00000498105 FANCD2Q9BXW9 1451 aa28.19■■■□□ 2.1
ASIC3-209ENST00000498105 CFTRP13569 1480 aa28.12■■■□□ 2.09
ASIC3-209ENST00000498105 OSCARQ8IYS5 282 aa28.06■■■□□ 2.08
ASIC3-209ENST00000498105 RSF1Q96T23 1441 aaPredicted RBP28.02■■■□□ 2.08
ASIC3-209ENST00000498105 TOP2AP11388 1531 aaKnown RBP27.97■■■□□ 2.07
ASIC3-209ENST00000498105 URB2Q14146 1524 aaKnown RBP27.94■■■□□ 2.06
ASIC3-209ENST00000498105 IFT140Q96RY7 1462 aa27.7■■■□□ 2.03
ASIC3-209ENST00000498105 CCDC88BA6NC98 1476 aa27.68■■■□□ 2.02
ASIC3-209ENST00000498105 PRDM2Q13029 1718 aa27.67■■■□□ 2.02
ASIC3-209ENST00000498105 ZNF608Q9ULD9 1512 aaPredicted RBP27.66■■■□□ 2.02
ASIC3-209ENST00000498105 RIMBP3CA6NJZ7 1639 aa27.6■■■□□ 2.01
ASIC3-209ENST00000498105 RIMBP3BA6NNM3 1639 aa27.6■■■□□ 2.01
ASIC3-209ENST00000498105 RIMBP3Q9UFD9 1639 aa27.6■■■□□ 2.01
ASIC3-209ENST00000498105 TOPBP1Q92547 1522 aa27.6■■■□□ 2.01
ASIC3-209ENST00000498105 ABCC8Q09428 1581 aa27.57■■■□□ 2
ASIC3-209ENST00000498105 ARHGEF11O15085 1522 aa27.52■■■□□ 2
ASIC3-209ENST00000498105 EIF4G3O43432 1585 aaKnown RBP27.46■■□□□ 1.99
ASIC3-209ENST00000498105 DNMBPQ6XZF7 1577 aa27.45■■□□□ 1.99
ASIC3-209ENST00000498105 CYB5RLQ6IPT4 315 aa27.41■■□□□ 1.98
ASIC3-209ENST00000498105 AQRO60306 1485 aaKnown RBP eCLIP27.39■■□□□ 1.98
ASIC3-209ENST00000498105 FBLN2P98095 1184 aa27.35■■□□□ 1.97
ASIC3-209ENST00000498105 TARBP1Q13395 1621 aaKnown RBP27.34■■□□□ 1.97
ASIC3-209ENST00000498105 POLA1P09884 1462 aaPredicted RBP27.3■■□□□ 1.96
ASIC3-209ENST00000498105 CHD1O14646 1710 aa27.27■■□□□ 1.96
ASIC3-209ENST00000498105 TRHP20396 242 aaPredicted RBP27.24■■□□□ 1.95
ASIC3-209ENST00000498105 ARAP1Q96P48 1450 aa27.22■■□□□ 1.95
ASIC3-209ENST00000498105 SOGA1O94964 1423 aa27.21■■□□□ 1.95
ASIC3-209ENST00000498105 RAD54L2Q9Y4B4 1467 aa27.2■■□□□ 1.95
ASIC3-209ENST00000498105 TDRD9Q8NDG6 1382 aaKnown RBP27.2■■□□□ 1.94
ASIC3-209ENST00000498105 CHMP7Q8WUX9 453 aaPredicted RBP27.1■■□□□ 1.93
ASIC3-209ENST00000498105 SNAPC4Q5SXM2 1469 aa27.1■■□□□ 1.93
ASIC3-209ENST00000498105 FGD5Q6ZNL6 1462 aa27.08■■□□□ 1.93
ASIC3-209ENST00000498105 WDR97A6NE52 1622 aa27.08■■□□□ 1.93
ASIC3-209ENST00000498105 MAGI1Q96QZ7 1491 aaPredicted RBP27.03■■□□□ 1.92
ASIC3-209ENST00000498105 CLASP1Q7Z460 1538 aa27■■□□□ 1.91
ASIC3-209ENST00000498105 GRIN2BQ13224 1484 aa27■■□□□ 1.91
ASIC3-209ENST00000498105 SYNJ1O43426 1573 aa27■■□□□ 1.91
ASIC3-209ENST00000498105 CUX1P39880 1505 aa26.99■■□□□ 1.91
ASIC3-209ENST00000498105 SYNJ2O15056 1496 aa26.94■■□□□ 1.9
ASIC3-209ENST00000498105 GAPVD1Q14C86 1478 aa26.86■■□□□ 1.89
ASIC3-209ENST00000498105 ABCA10Q8WWZ4 1543 aa26.76■■□□□ 1.87
ASIC3-209ENST00000498105 PBRM1Q86U86 1689 aa26.76■■□□□ 1.87
ASIC3-209ENST00000498105 ABCA5Q8WWZ7 1642 aa26.7■■□□□ 1.86
ASIC3-209ENST00000498105 AEBP2Q6ZN18 517 aaPredicted RBP26.7■■□□□ 1.86
ASIC3-209ENST00000498105 WRNQ14191 1432 aaPredicted RBP eCLIP26.64■■□□□ 1.85
ASIC3-209ENST00000498105 GRIN2AQ12879 1464 aa26.63■■□□□ 1.85
ASIC3-209ENST00000498105 SUPT5HO00267 1087 aaKnown RBP26.6■■□□□ 1.85
ASIC3-209ENST00000498105 NUP160Q12769 1436 aa26.56■■□□□ 1.84
ASIC3-209ENST00000498105 ERCC6L2Q5T890 1561 aa26.54■■□□□ 1.84
ASIC3-209ENST00000498105 ADAMTS12P58397 1594 aa26.54■■□□□ 1.84
ASIC3-209ENST00000498105 FHAD1B1AJZ9 1412 aa26.52■■□□□ 1.84
ASIC3-209ENST00000498105 CEP170Q5SW79 1584 aa26.51■■□□□ 1.83
ASIC3-209ENST00000498105 TOP2BQ02880 1626 aa26.47■■□□□ 1.83
ASIC3-209ENST00000498105 BIVM-ERCC5R4GMW8 1640 aa26.43■■□□□ 1.82
ASIC3-209ENST00000498105 ERICH3Q5RHP9 1530 aa26.43■■□□□ 1.82
ASIC3-209ENST00000498105 SHROOM2Q13796 1616 aa26.43■■□□□ 1.82
ASIC3-209ENST00000498105 PRG4Q92954 1404 aaPredicted RBP26.35■■□□□ 1.81
ASIC3-209ENST00000498105 JPH4Q96JJ6 628 aa26.35■■□□□ 1.81
ASIC3-209ENST00000498105 NPM1P06748 294 aaKnown RBP eCLIP26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms