RNA–Protein interactions for RNA: ENST00000497894.1

GABRA3-203, Transcript of gamma-aminobutyric acid type A receptor alpha3 subunit, humanhuman

TSL 2

Gene GABRA3, Length 384 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3-203ENST00000497894 NISCHQ9Y2I1 1504 aa25.42■■□□□ 1.66
GABRA3-203ENST00000497894 ABCC9O60706 1549 aa23.03■■□□□ 1.28
GABRA3-203ENST00000497894 CCDC180Q9P1Z9 1646 aa22.82■■□□□ 1.24
GABRA3-203ENST00000497894 RB1CC1Q8TDY2 1594 aa21.87■■□□□ 1.09
GABRA3-203ENST00000497894 DNAJC5BQ9UF47 199 aa21.8■■□□□ 1.08
GABRA3-203ENST00000497894 DCAF8L2P0C7V8 631 aa21.72■■□□□ 1.07
GABRA3-203ENST00000497894 NACADO15069 1562 aa21.71■■□□□ 1.07
GABRA3-203ENST00000497894 PABPN1Q86U42 306 aaKnown RBP eCLIP21.5■■□□□ 1.03
GABRA3-203ENST00000497894 MYO15BQ96JP2 1530 aa21.37■■□□□ 1.01
GABRA3-203ENST00000497894 UNC13AQ9UPW8 1703 aa21.18■□□□□ 0.98
GABRA3-203ENST00000497894 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.98
GABRA3-203ENST00000497894 DCAF1Q9Y4B6 1507 aa21.01■□□□□ 0.95
GABRA3-203ENST00000497894 ZCCHC6Q5VYS8 1495 aaKnown RBP20.99■□□□□ 0.95
GABRA3-203ENST00000497894 SHROOM4Q9ULL8 1493 aa20.97■□□□□ 0.95
GABRA3-203ENST00000497894 CECR2Q9BXF3 1484 aa20.81■□□□□ 0.92
GABRA3-203ENST00000497894 SCRIBQ14160 1630 aa20.76■□□□□ 0.91
GABRA3-203ENST00000497894 CC2D2AQ9P2K1 1620 aa20.76■□□□□ 0.91
GABRA3-203ENST00000497894 EIF4G1Q04637 1599 aaKnown RBP20.69■□□□□ 0.9
GABRA3-203ENST00000497894 DNAJC5Q9H3Z4 198 aa20.25■□□□□ 0.83
GABRA3-203ENST00000497894 NCAPD3P42695 1498 aa20.07■□□□□ 0.8
GABRA3-203ENST00000497894 CUX2O14529 1486 aa19.97■□□□□ 0.79
GABRA3-203ENST00000497894 ERCC6Q03468 1493 aa19.97■□□□□ 0.79
GABRA3-203ENST00000497894 ATAD2BQ9ULI0 1458 aa19.94■□□□□ 0.78
GABRA3-203ENST00000497894 SMARCA2P51531 1590 aa19.9■□□□□ 0.78
GABRA3-203ENST00000497894 HMGXB3Q12766 1538 aa19.83■□□□□ 0.77
GABRA3-203ENST00000497894 SMARCA4P51532 1647 aa19.8■□□□□ 0.76
GABRA3-203ENST00000497894 BAZ1AQ9NRL2 1556 aaPredicted RBP19.75■□□□□ 0.75
GABRA3-203ENST00000497894 BAZ1BQ9UIG0 1483 aaKnown RBP19.75■□□□□ 0.75
GABRA3-203ENST00000497894 NESP48681 1621 aa19.7■□□□□ 0.74
GABRA3-203ENST00000497894 PEG3Q9GZU2 1588 aa19.65■□□□□ 0.74
GABRA3-203ENST00000497894 LAMC3Q9Y6N6 1575 aa19.59■□□□□ 0.73
GABRA3-203ENST00000497894 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
GABRA3-203ENST00000497894 MROH2BQ7Z745 1585 aa19.54■□□□□ 0.72
GABRA3-203ENST00000497894 CADPSQ9ULU8 1353 aa19.48■□□□□ 0.71
GABRA3-203ENST00000497894 THOC2Q8NI27 1593 aaKnown RBP19.47■□□□□ 0.71
GABRA3-203ENST00000497894 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
GABRA3-203ENST00000497894 MRC2Q9UBG0 1479 aa19.34■□□□□ 0.69
GABRA3-203ENST00000497894 TRIM41Q8WV44 630 aa19.26■□□□□ 0.67
GABRA3-203ENST00000497894 WIZO95785 1651 aa19.26■□□□□ 0.67
GABRA3-203ENST00000497894 WDR62O43379 1518 aa19.25■□□□□ 0.67
GABRA3-203ENST00000497894 CEP164Q9UPV0 1460 aa19.23■□□□□ 0.67
GABRA3-203ENST00000497894 FANCD2Q9BXW9 1451 aa19.2■□□□□ 0.66
GABRA3-203ENST00000497894 OSCARQ8IYS5 282 aa19.18■□□□□ 0.66
GABRA3-203ENST00000497894 CFTRP13569 1480 aa19.17■□□□□ 0.66
GABRA3-203ENST00000497894 RSF1Q96T23 1441 aaPredicted RBP19.15■□□□□ 0.66
GABRA3-203ENST00000497894 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
GABRA3-203ENST00000497894 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
GABRA3-203ENST00000497894 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
GABRA3-203ENST00000497894 IFT140Q96RY7 1462 aa18.88■□□□□ 0.61
GABRA3-203ENST00000497894 ABCC8Q09428 1581 aa18.86■□□□□ 0.61
GABRA3-203ENST00000497894 PRDM2Q13029 1718 aa18.8■□□□□ 0.6
GABRA3-203ENST00000497894 TOPBP1Q92547 1522 aa18.79■□□□□ 0.6
GABRA3-203ENST00000497894 ZNF608Q9ULD9 1512 aaPredicted RBP18.79■□□□□ 0.6
GABRA3-203ENST00000497894 CYB5RLQ6IPT4 315 aa18.7■□□□□ 0.58
GABRA3-203ENST00000497894 RIMBP3CA6NJZ7 1639 aa18.7■□□□□ 0.58
GABRA3-203ENST00000497894 RIMBP3BA6NNM3 1639 aa18.7■□□□□ 0.58
GABRA3-203ENST00000497894 RIMBP3Q9UFD9 1639 aa18.7■□□□□ 0.58
GABRA3-203ENST00000497894 DNMBPQ6XZF7 1577 aa18.69■□□□□ 0.58
GABRA3-203ENST00000497894 FBLN2P98095 1184 aa18.69■□□□□ 0.58
GABRA3-203ENST00000497894 ARHGEF11O15085 1522 aa18.67■□□□□ 0.58
GABRA3-203ENST00000497894 AQRO60306 1485 aaKnown RBP eCLIP18.65■□□□□ 0.58
GABRA3-203ENST00000497894 EIF4G3O43432 1585 aaKnown RBP18.62■□□□□ 0.57
GABRA3-203ENST00000497894 SOGA1O94964 1423 aa18.59■□□□□ 0.57
GABRA3-203ENST00000497894 POLA1P09884 1462 aaPredicted RBP18.58■□□□□ 0.57
GABRA3-203ENST00000497894 TARBP1Q13395 1621 aaKnown RBP18.58■□□□□ 0.56
GABRA3-203ENST00000497894 TRHP20396 242 aaPredicted RBP18.57■□□□□ 0.56
GABRA3-203ENST00000497894 TDRD9Q8NDG6 1382 aaKnown RBP18.55■□□□□ 0.56
GABRA3-203ENST00000497894 CHMP7Q8WUX9 453 aaPredicted RBP18.55■□□□□ 0.56
GABRA3-203ENST00000497894 RAD54L2Q9Y4B4 1467 aa18.52■□□□□ 0.55
GABRA3-203ENST00000497894 CHD1O14646 1710 aa18.49■□□□□ 0.55
GABRA3-203ENST00000497894 ARAP1Q96P48 1450 aa18.46■□□□□ 0.54
GABRA3-203ENST00000497894 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
GABRA3-203ENST00000497894 FGD5Q6ZNL6 1462 aa18.44■□□□□ 0.54
GABRA3-203ENST00000497894 GRIN2BQ13224 1484 aa18.42■□□□□ 0.54
GABRA3-203ENST00000497894 SNAPC4Q5SXM2 1469 aa18.42■□□□□ 0.54
GABRA3-203ENST00000497894 MAGI1Q96QZ7 1491 aaPredicted RBP18.42■□□□□ 0.54
GABRA3-203ENST00000497894 CUX1P39880 1505 aa18.37■□□□□ 0.53
GABRA3-203ENST00000497894 SYNJ1O43426 1573 aa18.37■□□□□ 0.53
GABRA3-203ENST00000497894 SYNJ2O15056 1496 aa18.36■□□□□ 0.53
GABRA3-203ENST00000497894 CLASP1Q7Z460 1538 aa18.33■□□□□ 0.52
GABRA3-203ENST00000497894 GAPVD1Q14C86 1478 aa18.33■□□□□ 0.52
GABRA3-203ENST00000497894 SUPT5HO00267 1087 aaKnown RBP18.27■□□□□ 0.52
GABRA3-203ENST00000497894 ABCA10Q8WWZ4 1543 aa18.25■□□□□ 0.51
GABRA3-203ENST00000497894 WRNQ14191 1432 aaPredicted RBP eCLIP18.23■□□□□ 0.51
GABRA3-203ENST00000497894 AEBP2Q6ZN18 517 aaPredicted RBP18.19■□□□□ 0.5
GABRA3-203ENST00000497894 PBRM1Q86U86 1689 aa18.16■□□□□ 0.5
GABRA3-203ENST00000497894 ABCA5Q8WWZ7 1642 aa18.14■□□□□ 0.49
GABRA3-203ENST00000497894 GRIN2AQ12879 1464 aa18.14■□□□□ 0.49
GABRA3-203ENST00000497894 FHAD1B1AJZ9 1412 aa18.11■□□□□ 0.49
GABRA3-203ENST00000497894 NUP160Q12769 1436 aa18.09■□□□□ 0.49
GABRA3-203ENST00000497894 JPH4Q96JJ6 628 aa18.04■□□□□ 0.48
GABRA3-203ENST00000497894 TOP2BQ02880 1626 aa18.04■□□□□ 0.48
GABRA3-203ENST00000497894 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
GABRA3-203ENST00000497894 CEP170Q5SW79 1584 aa18.02■□□□□ 0.48
GABRA3-203ENST00000497894 ADAMTS12P58397 1594 aa18.01■□□□□ 0.47
GABRA3-203ENST00000497894 NPM1P06748 294 aaKnown RBP eCLIP18■□□□□ 0.47
GABRA3-203ENST00000497894 BIVM-ERCC5R4GMW8 1640 aa18■□□□□ 0.47
GABRA3-203ENST00000497894 ERCC6L2Q5T890 1561 aa17.99■□□□□ 0.47
GABRA3-203ENST00000497894 PRG4Q92954 1404 aaPredicted RBP17.98■□□□□ 0.47
GABRA3-203ENST00000497894 SHROOM2Q13796 1616 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms