RNA–Protein interactions for RNA: ENST00000497857.5

RUFY4-210, Transcript of RUN and FYVE domain containing 4, humanhuman

TSL 4

Gene RUFY4, Length 571 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4-210ENST00000497857 NISCHQ9Y2I1 1504 aa28.89■■■□□ 2.22
RUFY4-210ENST00000497857 ABCC9O60706 1549 aa25.9■■□□□ 1.74
RUFY4-210ENST00000497857 CCDC180Q9P1Z9 1646 aa25.88■■□□□ 1.73
RUFY4-210ENST00000497857 RB1CC1Q8TDY2 1594 aa24.67■■□□□ 1.54
RUFY4-210ENST00000497857 NACADO15069 1562 aa24.53■■□□□ 1.52
RUFY4-210ENST00000497857 DCAF8L2P0C7V8 631 aa24.4■■□□□ 1.5
RUFY4-210ENST00000497857 DNAJC5BQ9UF47 199 aa24.35■■□□□ 1.49
RUFY4-210ENST00000497857 MYO15BQ96JP2 1530 aa24.23■■□□□ 1.47
RUFY4-210ENST00000497857 PABPN1Q86U42 306 aaKnown RBP eCLIP24.15■■□□□ 1.46
RUFY4-210ENST00000497857 UNC13AQ9UPW8 1703 aa23.98■■□□□ 1.43
RUFY4-210ENST00000497857 ZCCHC6Q5VYS8 1495 aaKnown RBP23.94■■□□□ 1.42
RUFY4-210ENST00000497857 BICRAQ9NZM4 1560 aa23.92■■□□□ 1.42
RUFY4-210ENST00000497857 DCAF1Q9Y4B6 1507 aa23.9■■□□□ 1.42
RUFY4-210ENST00000497857 SHROOM4Q9ULL8 1493 aa23.69■■□□□ 1.38
RUFY4-210ENST00000497857 SCRIBQ14160 1630 aa23.56■■□□□ 1.36
RUFY4-210ENST00000497857 CC2D2AQ9P2K1 1620 aa23.38■■□□□ 1.33
RUFY4-210ENST00000497857 CECR2Q9BXF3 1484 aa23.36■■□□□ 1.33
RUFY4-210ENST00000497857 EIF4G1Q04637 1599 aaKnown RBP23.35■■□□□ 1.33
RUFY4-210ENST00000497857 NCAPD3P42695 1498 aa22.68■■□□□ 1.22
RUFY4-210ENST00000497857 ATAD2BQ9ULI0 1458 aa22.58■■□□□ 1.2
RUFY4-210ENST00000497857 SMARCA2P51531 1590 aa22.5■■□□□ 1.19
RUFY4-210ENST00000497857 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
RUFY4-210ENST00000497857 HMGXB3Q12766 1538 aa22.47■■□□□ 1.19
RUFY4-210ENST00000497857 BAZ1AQ9NRL2 1556 aaPredicted RBP22.42■■□□□ 1.18
RUFY4-210ENST00000497857 DNAJC5Q9H3Z4 198 aa22.41■■□□□ 1.18
RUFY4-210ENST00000497857 ERCC6Q03468 1493 aa22.39■■□□□ 1.17
RUFY4-210ENST00000497857 CUX2O14529 1486 aa22.38■■□□□ 1.17
RUFY4-210ENST00000497857 BAZ1BQ9UIG0 1483 aaKnown RBP22.34■■□□□ 1.17
RUFY4-210ENST00000497857 PEG3Q9GZU2 1588 aa22.33■■□□□ 1.16
RUFY4-210ENST00000497857 NESP48681 1621 aa22.24■■□□□ 1.15
RUFY4-210ENST00000497857 MROH2BQ7Z745 1585 aa22.24■■□□□ 1.15
RUFY4-210ENST00000497857 LAMC3Q9Y6N6 1575 aa22.11■■□□□ 1.13
RUFY4-210ENST00000497857 PDS5BQ9NTI5 1447 aa22.04■■□□□ 1.12
RUFY4-210ENST00000497857 THOC2Q8NI27 1593 aaKnown RBP21.99■■□□□ 1.11
RUFY4-210ENST00000497857 CADPSQ9ULU8 1353 aa21.99■■□□□ 1.11
RUFY4-210ENST00000497857 WIZO95785 1651 aa21.92■■□□□ 1.1
RUFY4-210ENST00000497857 RSF1Q96T23 1441 aaPredicted RBP21.91■■□□□ 1.1
RUFY4-210ENST00000497857 KIF21AQ7Z4S6 1674 aa21.88■■□□□ 1.09
RUFY4-210ENST00000497857 MRC2Q9UBG0 1479 aa21.81■■□□□ 1.08
RUFY4-210ENST00000497857 WDR62O43379 1518 aa21.75■■□□□ 1.07
RUFY4-210ENST00000497857 CFTRP13569 1480 aa21.72■■□□□ 1.07
RUFY4-210ENST00000497857 CEP164Q9UPV0 1460 aa21.71■■□□□ 1.07
RUFY4-210ENST00000497857 FANCD2Q9BXW9 1451 aa21.71■■□□□ 1.07
RUFY4-210ENST00000497857 TOP2AP11388 1531 aaKnown RBP21.7■■□□□ 1.07
RUFY4-210ENST00000497857 SUPT5HO00267 1087 aaKnown RBP21.59■■□□□ 1.05
RUFY4-210ENST00000497857 URB2Q14146 1524 aaKnown RBP21.5■■□□□ 1.03
RUFY4-210ENST00000497857 CCDC88BA6NC98 1476 aa21.48■■□□□ 1.03
RUFY4-210ENST00000497857 OSCARQ8IYS5 282 aa21.39■■□□□ 1.01
RUFY4-210ENST00000497857 TRIM41Q8WV44 630 aa21.36■■□□□ 1.01
RUFY4-210ENST00000497857 PRDM2Q13029 1718 aa21.35■■□□□ 1.01
RUFY4-210ENST00000497857 IFT140Q96RY7 1462 aa21.31■■□□□ 1
RUFY4-210ENST00000497857 ABCC8Q09428 1581 aa21.28■■□□□ 1
RUFY4-210ENST00000497857 TOPBP1Q92547 1522 aa21.28■■□□□ 1
RUFY4-210ENST00000497857 ZNF608Q9ULD9 1512 aaPredicted RBP21.24■□□□□ 0.99
RUFY4-210ENST00000497857 DNMBPQ6XZF7 1577 aa21.19■□□□□ 0.98
RUFY4-210ENST00000497857 EIF4G3O43432 1585 aaKnown RBP21.07■□□□□ 0.96
RUFY4-210ENST00000497857 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.96
RUFY4-210ENST00000497857 POLA1P09884 1462 aaPredicted RBP21.07■□□□□ 0.96
RUFY4-210ENST00000497857 TARBP1Q13395 1621 aaKnown RBP21.06■□□□□ 0.96
RUFY4-210ENST00000497857 SOGA1O94964 1423 aa21■□□□□ 0.95
RUFY4-210ENST00000497857 RIMBP3CA6NJZ7 1639 aa21■□□□□ 0.95
RUFY4-210ENST00000497857 RIMBP3BA6NNM3 1639 aa21■□□□□ 0.95
RUFY4-210ENST00000497857 RIMBP3Q9UFD9 1639 aa21■□□□□ 0.95
RUFY4-210ENST00000497857 RAD54L2Q9Y4B4 1467 aa20.98■□□□□ 0.95
RUFY4-210ENST00000497857 ARHGEF11O15085 1522 aa20.98■□□□□ 0.95
RUFY4-210ENST00000497857 TDRD9Q8NDG6 1382 aaKnown RBP20.95■□□□□ 0.94
RUFY4-210ENST00000497857 FBLN2P98095 1184 aa20.93■□□□□ 0.94
RUFY4-210ENST00000497857 FGD5Q6ZNL6 1462 aa20.92■□□□□ 0.94
RUFY4-210ENST00000497857 CUX1P39880 1505 aa20.89■□□□□ 0.94
RUFY4-210ENST00000497857 WDR97A6NE52 1622 aa20.89■□□□□ 0.93
RUFY4-210ENST00000497857 CHD1O14646 1710 aa20.87■□□□□ 0.93
RUFY4-210ENST00000497857 CYB5RLQ6IPT4 315 aa20.86■□□□□ 0.93
RUFY4-210ENST00000497857 SNAPC4Q5SXM2 1469 aa20.83■□□□□ 0.93
RUFY4-210ENST00000497857 CHMP7Q8WUX9 453 aaPredicted RBP20.81■□□□□ 0.92
RUFY4-210ENST00000497857 GRIN2BQ13224 1484 aa20.81■□□□□ 0.92
RUFY4-210ENST00000497857 MAGI1Q96QZ7 1491 aaPredicted RBP20.81■□□□□ 0.92
RUFY4-210ENST00000497857 ARAP1Q96P48 1450 aa20.77■□□□□ 0.92
RUFY4-210ENST00000497857 SYNJ2O15056 1496 aa20.74■□□□□ 0.91
RUFY4-210ENST00000497857 GAPVD1Q14C86 1478 aa20.73■□□□□ 0.91
RUFY4-210ENST00000497857 CLASP1Q7Z460 1538 aa20.72■□□□□ 0.91
RUFY4-210ENST00000497857 ABCA10Q8WWZ4 1543 aa20.72■□□□□ 0.91
RUFY4-210ENST00000497857 SYNJ1O43426 1573 aa20.71■□□□□ 0.91
RUFY4-210ENST00000497857 WRNQ14191 1432 aaPredicted RBP eCLIP20.65■□□□□ 0.9
RUFY4-210ENST00000497857 ABCA5Q8WWZ7 1642 aa20.63■□□□□ 0.89
RUFY4-210ENST00000497857 TRHP20396 242 aaPredicted RBP20.61■□□□□ 0.89
RUFY4-210ENST00000497857 PBRM1Q86U86 1689 aa20.61■□□□□ 0.89
RUFY4-210ENST00000497857 BIVM-ERCC5R4GMW8 1640 aa20.57■□□□□ 0.88
RUFY4-210ENST00000497857 TOP2BQ02880 1626 aa20.56■□□□□ 0.88
RUFY4-210ENST00000497857 GRIN2AQ12879 1464 aa20.52■□□□□ 0.88
RUFY4-210ENST00000497857 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
RUFY4-210ENST00000497857 FHAD1B1AJZ9 1412 aa20.49■□□□□ 0.87
RUFY4-210ENST00000497857 NUP160Q12769 1436 aa20.48■□□□□ 0.87
RUFY4-210ENST00000497857 ADAMTS12P58397 1594 aa20.47■□□□□ 0.87
RUFY4-210ENST00000497857 ERICH3Q5RHP9 1530 aa20.45■□□□□ 0.86
RUFY4-210ENST00000497857 CEP170Q5SW79 1584 aa20.41■□□□□ 0.86
RUFY4-210ENST00000497857 ERCC6L2Q5T890 1561 aa20.36■□□□□ 0.85
RUFY4-210ENST00000497857 SHROOM2Q13796 1616 aa20.33■□□□□ 0.84
RUFY4-210ENST00000497857 JPH4Q96JJ6 628 aa20.3■□□□□ 0.84
RUFY4-210ENST00000497857 PRG4Q92954 1404 aaPredicted RBP20.27■□□□□ 0.84
RUFY4-210ENST00000497857 IGF1RP08069 1367 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms