RNA–Protein interactions for RNA: ENST00000497654.2

CROCC-212, Transcript of ciliary rootlet coiled-coil, rootletin, humanhuman

TSL 2

Gene CROCC, Length 508 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCC-212ENST00000497654 NISCHQ9Y2I1 1504 aa38.79■■■■□ 3.8
CROCC-212ENST00000497654 CCDC180Q9P1Z9 1646 aa34.52■■■■□ 3.12
CROCC-212ENST00000497654 ABCC9O60706 1549 aa33.69■■■□□ 2.98
CROCC-212ENST00000497654 RB1CC1Q8TDY2 1594 aa32.43■■■□□ 2.78
CROCC-212ENST00000497654 NACADO15069 1562 aa32.39■■■□□ 2.78
CROCC-212ENST00000497654 DCAF8L2P0C7V8 631 aa32.37■■■□□ 2.77
CROCC-212ENST00000497654 ZCCHC6Q5VYS8 1495 aaKnown RBP32.34■■■□□ 2.77
CROCC-212ENST00000497654 MYO15BQ96JP2 1530 aa32.18■■■□□ 2.74
CROCC-212ENST00000497654 DCAF1Q9Y4B6 1507 aa32.08■■■□□ 2.73
CROCC-212ENST00000497654 UNC13AQ9UPW8 1703 aa31.83■■■□□ 2.69
CROCC-212ENST00000497654 SCRIBQ14160 1630 aa31.52■■■□□ 2.64
CROCC-212ENST00000497654 BICRAQ9NZM4 1560 aa31.47■■■□□ 2.63
CROCC-212ENST00000497654 PABPN1Q86U42 306 aaKnown RBP eCLIP31.45■■■□□ 2.63
CROCC-212ENST00000497654 SHROOM4Q9ULL8 1493 aa31.07■■■□□ 2.56
CROCC-212ENST00000497654 DNAJC5BQ9UF47 199 aa30.82■■■□□ 2.52
CROCC-212ENST00000497654 EIF4G1Q04637 1599 aaKnown RBP30.62■■■□□ 2.49
CROCC-212ENST00000497654 CC2D2AQ9P2K1 1620 aa30.51■■■□□ 2.47
CROCC-212ENST00000497654 CECR2Q9BXF3 1484 aa30.24■■■□□ 2.43
CROCC-212ENST00000497654 SMARCA4P51532 1647 aa30.14■■■□□ 2.41
CROCC-212ENST00000497654 BAZ1AQ9NRL2 1556 aaPredicted RBP30.07■■■□□ 2.4
CROCC-212ENST00000497654 MROH2BQ7Z745 1585 aa29.93■■■□□ 2.38
CROCC-212ENST00000497654 ATAD2BQ9ULI0 1458 aa29.91■■■□□ 2.38
CROCC-212ENST00000497654 SMARCA2P51531 1590 aa29.88■■■□□ 2.37
CROCC-212ENST00000497654 NCAPD3P42695 1498 aa29.85■■■□□ 2.37
CROCC-212ENST00000497654 PEG3Q9GZU2 1588 aa29.8■■■□□ 2.36
CROCC-212ENST00000497654 HMGXB3Q12766 1538 aa29.76■■■□□ 2.35
CROCC-212ENST00000497654 BAZ1BQ9UIG0 1483 aaKnown RBP29.68■■■□□ 2.34
CROCC-212ENST00000497654 WIZO95785 1651 aa29.66■■■□□ 2.34
CROCC-212ENST00000497654 RSF1Q96T23 1441 aaPredicted RBP29.56■■■□□ 2.32
CROCC-212ENST00000497654 TOP2AP11388 1531 aaKnown RBP29.3■■■□□ 2.28
CROCC-212ENST00000497654 NESP48681 1621 aa29.18■■■□□ 2.26
CROCC-212ENST00000497654 LAMC3Q9Y6N6 1575 aa29.1■■■□□ 2.25
CROCC-212ENST00000497654 ERCC6Q03468 1493 aa29.01■■■□□ 2.23
CROCC-212ENST00000497654 CADPSQ9ULU8 1353 aa28.98■■■□□ 2.23
CROCC-212ENST00000497654 CCDC88BA6NC98 1476 aa28.93■■■□□ 2.22
CROCC-212ENST00000497654 KIF21AQ7Z4S6 1674 aa28.91■■■□□ 2.22
CROCC-212ENST00000497654 SUPT5HO00267 1087 aaKnown RBP28.87■■■□□ 2.21
CROCC-212ENST00000497654 PDS5BQ9NTI5 1447 aa28.86■■■□□ 2.21
CROCC-212ENST00000497654 CFTRP13569 1480 aa28.84■■■□□ 2.21
CROCC-212ENST00000497654 PRDM2Q13029 1718 aa28.78■■■□□ 2.2
CROCC-212ENST00000497654 THOC2Q8NI27 1593 aaKnown RBP28.75■■■□□ 2.19
CROCC-212ENST00000497654 FANCD2Q9BXW9 1451 aa28.69■■■□□ 2.18
CROCC-212ENST00000497654 CUX2O14529 1486 aa28.67■■■□□ 2.18
CROCC-212ENST00000497654 CEP164Q9UPV0 1460 aa28.66■■■□□ 2.18
CROCC-212ENST00000497654 MRC2Q9UBG0 1479 aa28.59■■■□□ 2.17
CROCC-212ENST00000497654 WDR62O43379 1518 aa28.51■■■□□ 2.15
CROCC-212ENST00000497654 URB2Q14146 1524 aaKnown RBP28.41■■■□□ 2.14
CROCC-212ENST00000497654 TOPBP1Q92547 1522 aa28.25■■■□□ 2.11
CROCC-212ENST00000497654 DNMBPQ6XZF7 1577 aa28.24■■■□□ 2.11
CROCC-212ENST00000497654 ABCC8Q09428 1581 aa28.2■■■□□ 2.11
CROCC-212ENST00000497654 CUX1P39880 1505 aa28.08■■■□□ 2.08
CROCC-212ENST00000497654 IFT140Q96RY7 1462 aa28.02■■■□□ 2.08
CROCC-212ENST00000497654 POLA1P09884 1462 aaPredicted RBP28.01■■■□□ 2.07
CROCC-212ENST00000497654 TARBP1Q13395 1621 aaKnown RBP27.96■■■□□ 2.07
CROCC-212ENST00000497654 FGD5Q6ZNL6 1462 aa27.96■■■□□ 2.07
CROCC-212ENST00000497654 ZNF608Q9ULD9 1512 aaPredicted RBP27.92■■■□□ 2.06
CROCC-212ENST00000497654 RAD54L2Q9Y4B4 1467 aa27.89■■■□□ 2.06
CROCC-212ENST00000497654 WRNQ14191 1432 aaPredicted RBP eCLIP27.88■■■□□ 2.05
CROCC-212ENST00000497654 BIVM-ERCC5R4GMW8 1640 aa27.88■■■□□ 2.05
CROCC-212ENST00000497654 SOGA1O94964 1423 aa27.87■■■□□ 2.05
CROCC-212ENST00000497654 SYNJ1O43426 1573 aa27.86■■■□□ 2.05
CROCC-212ENST00000497654 EIF4G3O43432 1585 aaKnown RBP27.86■■■□□ 2.05
CROCC-212ENST00000497654 TOP2BQ02880 1626 aa27.85■■■□□ 2.05
CROCC-212ENST00000497654 WDR97A6NE52 1622 aa27.8■■■□□ 2.04
CROCC-212ENST00000497654 AQRO60306 1485 aaKnown RBP eCLIP27.76■■■□□ 2.04
CROCC-212ENST00000497654 TDRD9Q8NDG6 1382 aaKnown RBP27.71■■■□□ 2.03
CROCC-212ENST00000497654 ABCA10Q8WWZ4 1543 aa27.67■■■□□ 2.02
CROCC-212ENST00000497654 DNAJC5Q9H3Z4 198 aa27.67■■■□□ 2.02
CROCC-212ENST00000497654 ABCA5Q8WWZ7 1642 aa27.61■■■□□ 2.01
CROCC-212ENST00000497654 PBRM1Q86U86 1689 aa27.61■■■□□ 2.01
CROCC-212ENST00000497654 GAPVD1Q14C86 1478 aa27.57■■■□□ 2
CROCC-212ENST00000497654 CHD1O14646 1710 aa27.55■■■□□ 2
CROCC-212ENST00000497654 GRIN2BQ13224 1484 aa27.54■■■□□ 2
CROCC-212ENST00000497654 SNAPC4Q5SXM2 1469 aa27.52■■■□□ 2
CROCC-212ENST00000497654 MAGI1Q96QZ7 1491 aaPredicted RBP27.46■■□□□ 1.99
CROCC-212ENST00000497654 OSCARQ8IYS5 282 aa27.44■■□□□ 1.98
CROCC-212ENST00000497654 FBLN2P98095 1184 aa27.4■■□□□ 1.98
CROCC-212ENST00000497654 SYNJ2O15056 1496 aa27.36■■□□□ 1.97
CROCC-212ENST00000497654 ADAMTS12P58397 1594 aa27.35■■□□□ 1.97
CROCC-212ENST00000497654 ERICH3Q5RHP9 1530 aa27.34■■□□□ 1.97
CROCC-212ENST00000497654 CHMP7Q8WUX9 453 aaPredicted RBP27.31■■□□□ 1.96
CROCC-212ENST00000497654 KIF27Q86VH2 1401 aa27.28■■□□□ 1.96
CROCC-212ENST00000497654 TRIM41Q8WV44 630 aa27.24■■□□□ 1.95
CROCC-212ENST00000497654 FHAD1B1AJZ9 1412 aa27.23■■□□□ 1.95
CROCC-212ENST00000497654 GRIN2AQ12879 1464 aa27.2■■□□□ 1.95
CROCC-212ENST00000497654 CLASP1Q7Z460 1538 aa27.17■■□□□ 1.94
CROCC-212ENST00000497654 CUL7Q14999 1698 aa27.15■■□□□ 1.94
CROCC-212ENST00000497654 IGF1RP08069 1367 aa27.15■■□□□ 1.94
CROCC-212ENST00000497654 RIMBP3CA6NJZ7 1639 aa27.11■■□□□ 1.93
CROCC-212ENST00000497654 RIMBP3BA6NNM3 1639 aa27.11■■□□□ 1.93
CROCC-212ENST00000497654 RIMBP3Q9UFD9 1639 aa27.11■■□□□ 1.93
CROCC-212ENST00000497654 RUSC2Q8N2Y8 1516 aa27.11■■□□□ 1.93
CROCC-212ENST00000497654 CEP170Q5SW79 1584 aa27.1■■□□□ 1.93
CROCC-212ENST00000497654 ARHGEF11O15085 1522 aa27.08■■□□□ 1.93
CROCC-212ENST00000497654 NUP160Q12769 1436 aa27.07■■□□□ 1.92
CROCC-212ENST00000497654 CARMIL1Q5VZK9 1371 aa26.99■■□□□ 1.91
CROCC-212ENST00000497654 CHIC1Q5VXU3 224 aa26.96■■□□□ 1.91
CROCC-212ENST00000497654 SHROOM2Q13796 1616 aa26.9■■□□□ 1.9
CROCC-212ENST00000497654 ARAP1Q96P48 1450 aa26.87■■□□□ 1.89
CROCC-212ENST00000497654 RAPGEF2Q9Y4G8 1499 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms