RNA–Protein interactions for RNA: ENST00000497623.1

PCNX2-217, Transcript of pecanex 2, humanhuman

TSL 2

Gene PCNX2, Length 639 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-217ENST00000497623 NISCHQ9Y2I1 1504 aa23.59■■□□□ 1.37
PCNX2-217ENST00000497623 CCDC180Q9P1Z9 1646 aa21.01■□□□□ 0.95
PCNX2-217ENST00000497623 ABCC9O60706 1549 aa20.78■□□□□ 0.92
PCNX2-217ENST00000497623 RB1CC1Q8TDY2 1594 aa19.88■□□□□ 0.77
PCNX2-217ENST00000497623 DCAF8L2P0C7V8 631 aa19.82■□□□□ 0.76
PCNX2-217ENST00000497623 NACADO15069 1562 aa19.82■□□□□ 0.76
PCNX2-217ENST00000497623 MYO15BQ96JP2 1530 aa19.64■□□□□ 0.73
PCNX2-217ENST00000497623 ZCCHC6Q5VYS8 1495 aaKnown RBP19.6■□□□□ 0.73
PCNX2-217ENST00000497623 DCAF1Q9Y4B6 1507 aa19.49■□□□□ 0.71
PCNX2-217ENST00000497623 PABPN1Q86U42 306 aaKnown RBP eCLIP19.42■□□□□ 0.7
PCNX2-217ENST00000497623 UNC13AQ9UPW8 1703 aa19.4■□□□□ 0.7
PCNX2-217ENST00000497623 BICRAQ9NZM4 1560 aa19.31■□□□□ 0.68
PCNX2-217ENST00000497623 DNAJC5BQ9UF47 199 aa19.28■□□□□ 0.68
PCNX2-217ENST00000497623 SCRIBQ14160 1630 aa19.19■□□□□ 0.66
PCNX2-217ENST00000497623 SHROOM4Q9ULL8 1493 aa19.06■□□□□ 0.64
PCNX2-217ENST00000497623 EIF4G1Q04637 1599 aaKnown RBP18.81■□□□□ 0.6
PCNX2-217ENST00000497623 CC2D2AQ9P2K1 1620 aa18.78■□□□□ 0.6
PCNX2-217ENST00000497623 CECR2Q9BXF3 1484 aa18.7■□□□□ 0.58
PCNX2-217ENST00000497623 SMARCA4P51532 1647 aa18.33■□□□□ 0.52
PCNX2-217ENST00000497623 NCAPD3P42695 1498 aa18.31■□□□□ 0.52
PCNX2-217ENST00000497623 ATAD2BQ9ULI0 1458 aa18.29■□□□□ 0.52
PCNX2-217ENST00000497623 BAZ1AQ9NRL2 1556 aaPredicted RBP18.28■□□□□ 0.52
PCNX2-217ENST00000497623 SMARCA2P51531 1590 aa18.25■□□□□ 0.51
PCNX2-217ENST00000497623 MROH2BQ7Z745 1585 aa18.19■□□□□ 0.5
PCNX2-217ENST00000497623 HMGXB3Q12766 1538 aa18.18■□□□□ 0.5
PCNX2-217ENST00000497623 PEG3Q9GZU2 1588 aa18.15■□□□□ 0.5
PCNX2-217ENST00000497623 BAZ1BQ9UIG0 1483 aaKnown RBP18.13■□□□□ 0.49
PCNX2-217ENST00000497623 WIZO95785 1651 aa17.96■□□□□ 0.47
PCNX2-217ENST00000497623 NESP48681 1621 aa17.94■□□□□ 0.46
PCNX2-217ENST00000497623 RSF1Q96T23 1441 aaPredicted RBP17.92■□□□□ 0.46
PCNX2-217ENST00000497623 ERCC6Q03468 1493 aa17.92■□□□□ 0.46
PCNX2-217ENST00000497623 LAMC3Q9Y6N6 1575 aa17.83■□□□□ 0.45
PCNX2-217ENST00000497623 CUX2O14529 1486 aa17.79■□□□□ 0.44
PCNX2-217ENST00000497623 CADPSQ9ULU8 1353 aa17.78■□□□□ 0.44
PCNX2-217ENST00000497623 TOP2AP11388 1531 aaKnown RBP17.76■□□□□ 0.43
PCNX2-217ENST00000497623 PDS5BQ9NTI5 1447 aa17.74■□□□□ 0.43
PCNX2-217ENST00000497623 KIF21AQ7Z4S6 1674 aa17.68■□□□□ 0.42
PCNX2-217ENST00000497623 THOC2Q8NI27 1593 aaKnown RBP17.67■□□□□ 0.42
PCNX2-217ENST00000497623 CFTRP13569 1480 aa17.63■□□□□ 0.41
PCNX2-217ENST00000497623 CCDC88BA6NC98 1476 aa17.57■□□□□ 0.4
PCNX2-217ENST00000497623 FANCD2Q9BXW9 1451 aa17.56■□□□□ 0.4
PCNX2-217ENST00000497623 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
PCNX2-217ENST00000497623 CEP164Q9UPV0 1460 aa17.55■□□□□ 0.4
PCNX2-217ENST00000497623 AEBP2Q6ZN18 517 aaPredicted RBP17.53■□□□□ 0.4
PCNX2-217ENST00000497623 WDR62O43379 1518 aa17.51■□□□□ 0.39
PCNX2-217ENST00000497623 DNAJC5Q9H3Z4 198 aa17.49■□□□□ 0.39
PCNX2-217ENST00000497623 URB2Q14146 1524 aaKnown RBP17.41■□□□□ 0.38
PCNX2-217ENST00000497623 PRDM2Q13029 1718 aa17.41■□□□□ 0.38
PCNX2-217ENST00000497623 SUPT5HO00267 1087 aaKnown RBP17.34■□□□□ 0.37
PCNX2-217ENST00000497623 CHIC1Q5VXU3 224 aa17.26■□□□□ 0.35
PCNX2-217ENST00000497623 TOPBP1Q92547 1522 aa17.26■□□□□ 0.35
PCNX2-217ENST00000497623 ABCC8Q09428 1581 aa17.23■□□□□ 0.35
PCNX2-217ENST00000497623 DNMBPQ6XZF7 1577 aa17.21■□□□□ 0.35
PCNX2-217ENST00000497623 IFT140Q96RY7 1462 aa17.19■□□□□ 0.34
PCNX2-217ENST00000497623 ZNF608Q9ULD9 1512 aaPredicted RBP17.16■□□□□ 0.34
PCNX2-217ENST00000497623 POLA1P09884 1462 aaPredicted RBP17.11■□□□□ 0.33
PCNX2-217ENST00000497623 TARBP1Q13395 1621 aaKnown RBP17.08■□□□□ 0.32
PCNX2-217ENST00000497623 CUX1P39880 1505 aa17.07■□□□□ 0.32
PCNX2-217ENST00000497623 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
PCNX2-217ENST00000497623 EIF4G3O43432 1585 aaKnown RBP17.05■□□□□ 0.32
PCNX2-217ENST00000497623 RAD54L2Q9Y4B4 1467 aa17.05■□□□□ 0.32
PCNX2-217ENST00000497623 AQRO60306 1485 aaKnown RBP eCLIP17.04■□□□□ 0.32
PCNX2-217ENST00000497623 FGD5Q6ZNL6 1462 aa17.04■□□□□ 0.32
PCNX2-217ENST00000497623 SOGA1O94964 1423 aa17.04■□□□□ 0.32
PCNX2-217ENST00000497623 TDRD9Q8NDG6 1382 aaKnown RBP16.98■□□□□ 0.31
PCNX2-217ENST00000497623 WDR97A6NE52 1622 aa16.91■□□□□ 0.3
PCNX2-217ENST00000497623 WRNQ14191 1432 aaPredicted RBP eCLIP16.88■□□□□ 0.29
PCNX2-217ENST00000497623 FBLN2P98095 1184 aa16.87■□□□□ 0.29
PCNX2-217ENST00000497623 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
PCNX2-217ENST00000497623 TOP2BQ02880 1626 aa16.86■□□□□ 0.29
PCNX2-217ENST00000497623 ABCA10Q8WWZ4 1543 aa16.86■□□□□ 0.29
PCNX2-217ENST00000497623 SYNJ1O43426 1573 aa16.85■□□□□ 0.29
PCNX2-217ENST00000497623 GRIN2BQ13224 1484 aa16.85■□□□□ 0.29
PCNX2-217ENST00000497623 BIVM-ERCC5R4GMW8 1640 aa16.85■□□□□ 0.29
PCNX2-217ENST00000497623 CHD1O14646 1710 aa16.84■□□□□ 0.29
PCNX2-217ENST00000497623 TRIM41Q8WV44 630 aa16.84■□□□□ 0.29
PCNX2-217ENST00000497623 GAPVD1Q14C86 1478 aa16.84■□□□□ 0.29
PCNX2-217ENST00000497623 MAGI1Q96QZ7 1491 aaPredicted RBP16.82■□□□□ 0.28
PCNX2-217ENST00000497623 ABCA5Q8WWZ7 1642 aa16.79■□□□□ 0.28
PCNX2-217ENST00000497623 CHMP7Q8WUX9 453 aaPredicted RBP16.79■□□□□ 0.28
PCNX2-217ENST00000497623 PBRM1Q86U86 1689 aa16.77■□□□□ 0.28
PCNX2-217ENST00000497623 RIMBP3CA6NJZ7 1639 aa16.77■□□□□ 0.27
PCNX2-217ENST00000497623 RIMBP3BA6NNM3 1639 aa16.77■□□□□ 0.27
PCNX2-217ENST00000497623 RIMBP3Q9UFD9 1639 aa16.77■□□□□ 0.27
PCNX2-217ENST00000497623 SYNJ2O15056 1496 aa16.76■□□□□ 0.27
PCNX2-217ENST00000497623 ARHGEF11O15085 1522 aa16.75■□□□□ 0.27
PCNX2-217ENST00000497623 CLASP1Q7Z460 1538 aa16.69■□□□□ 0.26
PCNX2-217ENST00000497623 ADAMTS12P58397 1594 aa16.65■□□□□ 0.26
PCNX2-217ENST00000497623 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
PCNX2-217ENST00000497623 FHAD1B1AJZ9 1412 aa16.63■□□□□ 0.25
PCNX2-217ENST00000497623 GRIN2AQ12879 1464 aa16.63■□□□□ 0.25
PCNX2-217ENST00000497623 CYB5RLQ6IPT4 315 aa16.63■□□□□ 0.25
PCNX2-217ENST00000497623 ARAP1Q96P48 1450 aa16.61■□□□□ 0.25
PCNX2-217ENST00000497623 NUP160Q12769 1436 aa16.57■□□□□ 0.24
PCNX2-217ENST00000497623 CEP170Q5SW79 1584 aa16.55■□□□□ 0.24
PCNX2-217ENST00000497623 KIF27Q86VH2 1401 aa16.55■□□□□ 0.24
PCNX2-217ENST00000497623 IGF1RP08069 1367 aa16.52■□□□□ 0.24
PCNX2-217ENST00000497623 ERCC6L2Q5T890 1561 aa16.47■□□□□ 0.23
PCNX2-217ENST00000497623 SHROOM2Q13796 1616 aa16.45■□□□□ 0.22
PCNX2-217ENST00000497623 CUL7Q14999 1698 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 701.2 ms