RNA–Protein interactions for RNA: ENST00000497399.1

TCTN3-206, Transcript of tectonic family member 3, humanhuman

TSL 5

Gene TCTN3, Length 800 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-206ENST00000497399 NISCHQ9Y2I1 1504 aa23.06■■□□□ 1.28
TCTN3-206ENST00000497399 ABCC9O60706 1549 aa20.64■□□□□ 0.9
TCTN3-206ENST00000497399 CCDC180Q9P1Z9 1646 aa20.64■□□□□ 0.89
TCTN3-206ENST00000497399 RB1CC1Q8TDY2 1594 aa19.61■□□□□ 0.73
TCTN3-206ENST00000497399 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.72
TCTN3-206ENST00000497399 NACADO15069 1562 aa19.47■□□□□ 0.71
TCTN3-206ENST00000497399 UNC13AQ9UPW8 1703 aa19.42■□□□□ 0.7
TCTN3-206ENST00000497399 ZCCHC6Q5VYS8 1495 aaKnown RBP19.32■□□□□ 0.68
TCTN3-206ENST00000497399 BICRAQ9NZM4 1560 aa19.2■□□□□ 0.66
TCTN3-206ENST00000497399 MYO15BQ96JP2 1530 aa19.2■□□□□ 0.66
TCTN3-206ENST00000497399 DCAF8L2P0C7V8 631 aa19.17■□□□□ 0.66
TCTN3-206ENST00000497399 PABPN1Q86U42 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
TCTN3-206ENST00000497399 DCAF1Q9Y4B6 1507 aa19.1■□□□□ 0.65
TCTN3-206ENST00000497399 SHROOM4Q9ULL8 1493 aa18.74■□□□□ 0.59
TCTN3-206ENST00000497399 SCRIBQ14160 1630 aa18.74■□□□□ 0.59
TCTN3-206ENST00000497399 CC2D2AQ9P2K1 1620 aa18.71■□□□□ 0.59
TCTN3-206ENST00000497399 EIF4G1Q04637 1599 aaKnown RBP18.64■□□□□ 0.57
TCTN3-206ENST00000497399 CECR2Q9BXF3 1484 aa18.58■□□□□ 0.56
TCTN3-206ENST00000497399 NCAPD3P42695 1498 aa18■□□□□ 0.47
TCTN3-206ENST00000497399 DNAJC5Q9H3Z4 198 aa17.94■□□□□ 0.46
TCTN3-206ENST00000497399 ATAD2BQ9ULI0 1458 aa17.92■□□□□ 0.46
TCTN3-206ENST00000497399 SMARCA4P51532 1647 aa17.91■□□□□ 0.46
TCTN3-206ENST00000497399 HMGXB3Q12766 1538 aa17.84■□□□□ 0.45
TCTN3-206ENST00000497399 BAZ1AQ9NRL2 1556 aaPredicted RBP17.83■□□□□ 0.44
TCTN3-206ENST00000497399 SMARCA2P51531 1590 aa17.81■□□□□ 0.44
TCTN3-206ENST00000497399 CUX2O14529 1486 aa17.81■□□□□ 0.44
TCTN3-206ENST00000497399 MROH2BQ7Z745 1585 aa17.8■□□□□ 0.44
TCTN3-206ENST00000497399 PEG3Q9GZU2 1588 aa17.78■□□□□ 0.44
TCTN3-206ENST00000497399 NESP48681 1621 aa17.77■□□□□ 0.44
TCTN3-206ENST00000497399 RSF1Q96T23 1441 aaPredicted RBP17.75■□□□□ 0.43
TCTN3-206ENST00000497399 ERCC6Q03468 1493 aa17.71■□□□□ 0.43
TCTN3-206ENST00000497399 BAZ1BQ9UIG0 1483 aaKnown RBP17.66■□□□□ 0.42
TCTN3-206ENST00000497399 WIZO95785 1651 aa17.66■□□□□ 0.42
TCTN3-206ENST00000497399 THOC2Q8NI27 1593 aaKnown RBP17.65■□□□□ 0.42
TCTN3-206ENST00000497399 SUPT5HO00267 1087 aaKnown RBP17.63■□□□□ 0.41
TCTN3-206ENST00000497399 KIF21AQ7Z4S6 1674 aa17.61■□□□□ 0.41
TCTN3-206ENST00000497399 LAMC3Q9Y6N6 1575 aa17.59■□□□□ 0.41
TCTN3-206ENST00000497399 TOP2AP11388 1531 aaKnown RBP17.46■□□□□ 0.39
TCTN3-206ENST00000497399 CADPSQ9ULU8 1353 aa17.39■□□□□ 0.37
TCTN3-206ENST00000497399 PDS5BQ9NTI5 1447 aa17.38■□□□□ 0.37
TCTN3-206ENST00000497399 WDR62O43379 1518 aa17.33■□□□□ 0.37
TCTN3-206ENST00000497399 MRC2Q9UBG0 1479 aa17.3■□□□□ 0.36
TCTN3-206ENST00000497399 CCDC88BA6NC98 1476 aa17.25■□□□□ 0.35
TCTN3-206ENST00000497399 CFTRP13569 1480 aa17.21■□□□□ 0.35
TCTN3-206ENST00000497399 FANCD2Q9BXW9 1451 aa17.19■□□□□ 0.34
TCTN3-206ENST00000497399 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
TCTN3-206ENST00000497399 PRDM2Q13029 1718 aa17.17■□□□□ 0.34
TCTN3-206ENST00000497399 URB2Q14146 1524 aaKnown RBP17.13■□□□□ 0.33
TCTN3-206ENST00000497399 TRIM41Q8WV44 630 aa16.99■□□□□ 0.31
TCTN3-206ENST00000497399 ZNF608Q9ULD9 1512 aaPredicted RBP16.92■□□□□ 0.3
TCTN3-206ENST00000497399 OSCARQ8IYS5 282 aa16.92■□□□□ 0.3
TCTN3-206ENST00000497399 TOPBP1Q92547 1522 aa16.9■□□□□ 0.3
TCTN3-206ENST00000497399 RIMBP3CA6NJZ7 1639 aa16.86■□□□□ 0.29
TCTN3-206ENST00000497399 RIMBP3BA6NNM3 1639 aa16.86■□□□□ 0.29
TCTN3-206ENST00000497399 RIMBP3Q9UFD9 1639 aa16.86■□□□□ 0.29
TCTN3-206ENST00000497399 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
TCTN3-206ENST00000497399 TARBP1Q13395 1621 aaKnown RBP16.84■□□□□ 0.29
TCTN3-206ENST00000497399 EIF4G3O43432 1585 aaKnown RBP16.82■□□□□ 0.28
TCTN3-206ENST00000497399 DNMBPQ6XZF7 1577 aa16.81■□□□□ 0.28
TCTN3-206ENST00000497399 ABCC8Q09428 1581 aa16.8■□□□□ 0.28
TCTN3-206ENST00000497399 CHD1O14646 1710 aa16.79■□□□□ 0.28
TCTN3-206ENST00000497399 CHIC1Q5VXU3 224 aa16.77■□□□□ 0.28
TCTN3-206ENST00000497399 ARHGEF11O15085 1522 aa16.74■□□□□ 0.27
TCTN3-206ENST00000497399 AQRO60306 1485 aaKnown RBP eCLIP16.73■□□□□ 0.27
TCTN3-206ENST00000497399 POLA1P09884 1462 aaPredicted RBP16.71■□□□□ 0.27
TCTN3-206ENST00000497399 WRNQ14191 1432 aaPredicted RBP eCLIP16.7■□□□□ 0.26
TCTN3-206ENST00000497399 SYNJ1O43426 1573 aa16.69■□□□□ 0.26
TCTN3-206ENST00000497399 RAD54L2Q9Y4B4 1467 aa16.67■□□□□ 0.26
TCTN3-206ENST00000497399 CUX1P39880 1505 aa16.66■□□□□ 0.26
TCTN3-206ENST00000497399 BIVM-ERCC5R4GMW8 1640 aa16.66■□□□□ 0.26
TCTN3-206ENST00000497399 TOP2BQ02880 1626 aa16.65■□□□□ 0.26
TCTN3-206ENST00000497399 WDR97A6NE52 1622 aa16.61■□□□□ 0.25
TCTN3-206ENST00000497399 ARAP1Q96P48 1450 aa16.59■□□□□ 0.25
TCTN3-206ENST00000497399 SOGA1O94964 1423 aa16.58■□□□□ 0.24
TCTN3-206ENST00000497399 FGD5Q6ZNL6 1462 aa16.58■□□□□ 0.24
TCTN3-206ENST00000497399 TDRD9Q8NDG6 1382 aaKnown RBP16.56■□□□□ 0.24
TCTN3-206ENST00000497399 CLASP1Q7Z460 1538 aa16.55■□□□□ 0.24
TCTN3-206ENST00000497399 CYB5RLQ6IPT4 315 aa16.54■□□□□ 0.24
TCTN3-206ENST00000497399 SNAPC4Q5SXM2 1469 aa16.52■□□□□ 0.23
TCTN3-206ENST00000497399 PBRM1Q86U86 1689 aa16.51■□□□□ 0.23
TCTN3-206ENST00000497399 FBLN2P98095 1184 aa16.47■□□□□ 0.23
TCTN3-206ENST00000497399 MAGI1Q96QZ7 1491 aaPredicted RBP16.46■□□□□ 0.23
TCTN3-206ENST00000497399 ABCA5Q8WWZ7 1642 aa16.45■□□□□ 0.22
TCTN3-206ENST00000497399 GRIN2BQ13224 1484 aa16.44■□□□□ 0.22
TCTN3-206ENST00000497399 SYNJ2O15056 1496 aa16.42■□□□□ 0.22
TCTN3-206ENST00000497399 ABCA10Q8WWZ4 1543 aa16.4■□□□□ 0.22
TCTN3-206ENST00000497399 GAPVD1Q14C86 1478 aa16.38■□□□□ 0.21
TCTN3-206ENST00000497399 RUSC2Q8N2Y8 1516 aa16.38■□□□□ 0.21
TCTN3-206ENST00000497399 CHMP7Q8WUX9 453 aaPredicted RBP16.36■□□□□ 0.21
TCTN3-206ENST00000497399 ERCC6L2Q5T890 1561 aa16.33■□□□□ 0.2
TCTN3-206ENST00000497399 TRHP20396 242 aaPredicted RBP16.3■□□□□ 0.2
TCTN3-206ENST00000497399 EEA1Q15075 1411 aa16.29■□□□□ 0.2
TCTN3-206ENST00000497399 KIF27Q86VH2 1401 aa16.29■□□□□ 0.2
TCTN3-206ENST00000497399 FAM9AQ8IZU1 332 aaPredicted RBP16.29■□□□□ 0.2
TCTN3-206ENST00000497399 CEP170Q5SW79 1584 aa16.29■□□□□ 0.2
TCTN3-206ENST00000497399 ADAMTS12P58397 1594 aa16.28■□□□□ 0.2
TCTN3-206ENST00000497399 GRIN2AQ12879 1464 aa16.27■□□□□ 0.19
TCTN3-206ENST00000497399 SHROOM2Q13796 1616 aa16.27■□□□□ 0.19
TCTN3-206ENST00000497399 NUP160Q12769 1436 aa16.24■□□□□ 0.19
TCTN3-206ENST00000497399 CSRNP3Q8WYN3 585 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms