RNA–Protein interactions for RNA: ENST00000497333.5

POLR3F-206, Transcript of RNA polymerase III subunit F, humanhuman

TSL 3

Gene POLR3F, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3F-206ENST00000497333 NISCHQ9Y2I1 1504 aa30.74■■■□□ 2.51
POLR3F-206ENST00000497333 CCDC180Q9P1Z9 1646 aa27.34■■□□□ 1.97
POLR3F-206ENST00000497333 ABCC9O60706 1549 aa26.72■■□□□ 1.87
POLR3F-206ENST00000497333 DCAF8L2P0C7V8 631 aa25.72■■□□□ 1.71
POLR3F-206ENST00000497333 RB1CC1Q8TDY2 1594 aa25.7■■□□□ 1.71
POLR3F-206ENST00000497333 NACADO15069 1562 aa25.67■■□□□ 1.7
POLR3F-206ENST00000497333 ZCCHC6Q5VYS8 1495 aaKnown RBP25.61■■□□□ 1.69
POLR3F-206ENST00000497333 MYO15BQ96JP2 1530 aa25.47■■□□□ 1.67
POLR3F-206ENST00000497333 DCAF1Q9Y4B6 1507 aa25.4■■□□□ 1.66
POLR3F-206ENST00000497333 UNC13AQ9UPW8 1703 aa25.23■■□□□ 1.63
POLR3F-206ENST00000497333 PABPN1Q86U42 306 aaKnown RBP eCLIP24.99■■□□□ 1.59
POLR3F-206ENST00000497333 SCRIBQ14160 1630 aa24.98■■□□□ 1.59
POLR3F-206ENST00000497333 BICRAQ9NZM4 1560 aa24.94■■□□□ 1.58
POLR3F-206ENST00000497333 SHROOM4Q9ULL8 1493 aa24.59■■□□□ 1.53
POLR3F-206ENST00000497333 DNAJC5BQ9UF47 199 aa24.48■■□□□ 1.51
POLR3F-206ENST00000497333 EIF4G1Q04637 1599 aaKnown RBP24.27■■□□□ 1.48
POLR3F-206ENST00000497333 CC2D2AQ9P2K1 1620 aa24.18■■□□□ 1.46
POLR3F-206ENST00000497333 CECR2Q9BXF3 1484 aa23.99■■□□□ 1.43
POLR3F-206ENST00000497333 SMARCA4P51532 1647 aa23.88■■□□□ 1.41
POLR3F-206ENST00000497333 BAZ1AQ9NRL2 1556 aaPredicted RBP23.82■■□□□ 1.4
POLR3F-206ENST00000497333 MROH2BQ7Z745 1585 aa23.72■■□□□ 1.39
POLR3F-206ENST00000497333 ATAD2BQ9ULI0 1458 aa23.71■■□□□ 1.39
POLR3F-206ENST00000497333 SMARCA2P51531 1590 aa23.68■■□□□ 1.38
POLR3F-206ENST00000497333 NCAPD3P42695 1498 aa23.66■■□□□ 1.38
POLR3F-206ENST00000497333 PEG3Q9GZU2 1588 aa23.6■■□□□ 1.37
POLR3F-206ENST00000497333 HMGXB3Q12766 1538 aa23.57■■□□□ 1.36
POLR3F-206ENST00000497333 BAZ1BQ9UIG0 1483 aaKnown RBP23.52■■□□□ 1.36
POLR3F-206ENST00000497333 WIZO95785 1651 aa23.51■■□□□ 1.35
POLR3F-206ENST00000497333 RSF1Q96T23 1441 aaPredicted RBP23.43■■□□□ 1.34
POLR3F-206ENST00000497333 TOP2AP11388 1531 aaKnown RBP23.21■■□□□ 1.31
POLR3F-206ENST00000497333 NESP48681 1621 aa23.15■■□□□ 1.3
POLR3F-206ENST00000497333 LAMC3Q9Y6N6 1575 aa23.06■■□□□ 1.28
POLR3F-206ENST00000497333 ERCC6Q03468 1493 aa23.02■■□□□ 1.28
POLR3F-206ENST00000497333 CADPSQ9ULU8 1353 aa22.99■■□□□ 1.27
POLR3F-206ENST00000497333 CCDC88BA6NC98 1476 aa22.93■■□□□ 1.26
POLR3F-206ENST00000497333 SUPT5HO00267 1087 aaKnown RBP22.93■■□□□ 1.26
POLR3F-206ENST00000497333 KIF21AQ7Z4S6 1674 aa22.92■■□□□ 1.26
POLR3F-206ENST00000497333 PDS5BQ9NTI5 1447 aa22.88■■□□□ 1.25
POLR3F-206ENST00000497333 CFTRP13569 1480 aa22.85■■□□□ 1.25
POLR3F-206ENST00000497333 PRDM2Q13029 1718 aa22.8■■□□□ 1.24
POLR3F-206ENST00000497333 THOC2Q8NI27 1593 aaKnown RBP22.78■■□□□ 1.24
POLR3F-206ENST00000497333 FANCD2Q9BXW9 1451 aa22.74■■□□□ 1.23
POLR3F-206ENST00000497333 CUX2O14529 1486 aa22.73■■□□□ 1.23
POLR3F-206ENST00000497333 CEP164Q9UPV0 1460 aa22.71■■□□□ 1.23
POLR3F-206ENST00000497333 MRC2Q9UBG0 1479 aa22.66■■□□□ 1.22
POLR3F-206ENST00000497333 WDR62O43379 1518 aa22.59■■□□□ 1.21
POLR3F-206ENST00000497333 URB2Q14146 1524 aaKnown RBP22.52■■□□□ 1.2
POLR3F-206ENST00000497333 AEBP2Q6ZN18 517 aaPredicted RBP22.44■■□□□ 1.18
POLR3F-206ENST00000497333 TOPBP1Q92547 1522 aa22.39■■□□□ 1.17
POLR3F-206ENST00000497333 DNMBPQ6XZF7 1577 aa22.38■■□□□ 1.17
POLR3F-206ENST00000497333 ABCC8Q09428 1581 aa22.35■■□□□ 1.17
POLR3F-206ENST00000497333 CUX1P39880 1505 aa22.25■■□□□ 1.15
POLR3F-206ENST00000497333 IFT140Q96RY7 1462 aa22.22■■□□□ 1.15
POLR3F-206ENST00000497333 POLA1P09884 1462 aaPredicted RBP22.2■■□□□ 1.14
POLR3F-206ENST00000497333 FGD5Q6ZNL6 1462 aa22.16■■□□□ 1.14
POLR3F-206ENST00000497333 TARBP1Q13395 1621 aaKnown RBP22.15■■□□□ 1.14
POLR3F-206ENST00000497333 ZNF608Q9ULD9 1512 aaPredicted RBP22.15■■□□□ 1.14
POLR3F-206ENST00000497333 RAD54L2Q9Y4B4 1467 aa22.13■■□□□ 1.13
POLR3F-206ENST00000497333 SOGA1O94964 1423 aa22.1■■□□□ 1.13
POLR3F-206ENST00000497333 WRNQ14191 1432 aaPredicted RBP eCLIP22.1■■□□□ 1.13
POLR3F-206ENST00000497333 BIVM-ERCC5R4GMW8 1640 aa22.08■■□□□ 1.13
POLR3F-206ENST00000497333 SYNJ1O43426 1573 aa22.08■■□□□ 1.12
POLR3F-206ENST00000497333 EIF4G3O43432 1585 aaKnown RBP22.07■■□□□ 1.12
POLR3F-206ENST00000497333 TOP2BQ02880 1626 aa22.06■■□□□ 1.12
POLR3F-206ENST00000497333 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.12
POLR3F-206ENST00000497333 WDR97A6NE52 1622 aa22.01■■□□□ 1.11
POLR3F-206ENST00000497333 TDRD9Q8NDG6 1382 aaKnown RBP21.99■■□□□ 1.11
POLR3F-206ENST00000497333 DNAJC5Q9H3Z4 198 aa21.98■■□□□ 1.11
POLR3F-206ENST00000497333 ABCA10Q8WWZ4 1543 aa21.93■■□□□ 1.1
POLR3F-206ENST00000497333 PBRM1Q86U86 1689 aa21.88■■□□□ 1.09
POLR3F-206ENST00000497333 ABCA5Q8WWZ7 1642 aa21.87■■□□□ 1.09
POLR3F-206ENST00000497333 GAPVD1Q14C86 1478 aa21.85■■□□□ 1.09
POLR3F-206ENST00000497333 CHD1O14646 1710 aa21.85■■□□□ 1.09
POLR3F-206ENST00000497333 GRIN2BQ13224 1484 aa21.83■■□□□ 1.09
POLR3F-206ENST00000497333 SNAPC4Q5SXM2 1469 aa21.83■■□□□ 1.08
POLR3F-206ENST00000497333 OSCARQ8IYS5 282 aa21.81■■□□□ 1.08
POLR3F-206ENST00000497333 FBLN2P98095 1184 aa21.77■■□□□ 1.08
POLR3F-206ENST00000497333 MAGI1Q96QZ7 1491 aaPredicted RBP21.77■■□□□ 1.07
POLR3F-206ENST00000497333 CHMP7Q8WUX9 453 aaPredicted RBP21.69■■□□□ 1.06
POLR3F-206ENST00000497333 SYNJ2O15056 1496 aa21.69■■□□□ 1.06
POLR3F-206ENST00000497333 ERICH3Q5RHP9 1530 aa21.66■■□□□ 1.06
POLR3F-206ENST00000497333 ADAMTS12P58397 1594 aa21.65■■□□□ 1.06
POLR3F-206ENST00000497333 KIF27Q86VH2 1401 aa21.63■■□□□ 1.05
POLR3F-206ENST00000497333 TRIM41Q8WV44 630 aa21.61■■□□□ 1.05
POLR3F-206ENST00000497333 FHAD1B1AJZ9 1412 aa21.59■■□□□ 1.05
POLR3F-206ENST00000497333 GRIN2AQ12879 1464 aa21.56■■□□□ 1.04
POLR3F-206ENST00000497333 IGF1RP08069 1367 aa21.53■■□□□ 1.04
POLR3F-206ENST00000497333 CLASP1Q7Z460 1538 aa21.52■■□□□ 1.04
POLR3F-206ENST00000497333 RIMBP3CA6NJZ7 1639 aa21.51■■□□□ 1.03
POLR3F-206ENST00000497333 RIMBP3BA6NNM3 1639 aa21.51■■□□□ 1.03
POLR3F-206ENST00000497333 RIMBP3Q9UFD9 1639 aa21.51■■□□□ 1.03
POLR3F-206ENST00000497333 CUL7Q14999 1698 aa21.5■■□□□ 1.03
POLR3F-206ENST00000497333 RUSC2Q8N2Y8 1516 aa21.5■■□□□ 1.03
POLR3F-206ENST00000497333 CEP170Q5SW79 1584 aa21.48■■□□□ 1.03
POLR3F-206ENST00000497333 ARHGEF11O15085 1522 aa21.47■■□□□ 1.03
POLR3F-206ENST00000497333 NUP160Q12769 1436 aa21.46■■□□□ 1.03
POLR3F-206ENST00000497333 CARMIL1Q5VZK9 1371 aa21.43■■□□□ 1.02
POLR3F-206ENST00000497333 CHIC1Q5VXU3 224 aa21.39■■□□□ 1.01
POLR3F-206ENST00000497333 SHROOM2Q13796 1616 aa21.31■■□□□ 1
POLR3F-206ENST00000497333 ARAP1Q96P48 1450 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms