RNA–Protein interactions for RNA: ENST00000497144.5

SFXN5-222, Transcript of sideroflexin 5, human

TSL 4

Gene SFXN5, Length 598 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFXN5-222	ENST00000497144	NISCH	Q9Y2I1	1504 aa		43.07	■■■■■ 4.49
SFXN5-222	ENST00000497144	ABCC9	O60706	1549 aa		38.83	■■■■□ 3.81
SFXN5-222	ENST00000497144	CCDC180	Q9P1Z9	1646 aa		38.42	■■■■□ 3.74
SFXN5-222	ENST00000497144	RB1CC1	Q8TDY2	1594 aa		36.78	■■■■□ 3.48
SFXN5-222	ENST00000497144	DNAJC5B	Q9UF47	199 aa		36.72	■■■■□ 3.47
SFXN5-222	ENST00000497144	NACAD	O15069	1562 aa		36.41	■■■■□ 3.42
SFXN5-222	ENST00000497144	DCAF8L2	P0C7V8	631 aa		36.41	■■■■□ 3.42
SFXN5-222	ENST00000497144	PABPN1	Q86U42	306 aa	Known RBP eCLIP	36.08	■■■■□ 3.37
SFXN5-222	ENST00000497144	MYO15B	Q96JP2	1530 aa		35.92	■■■■□ 3.34
SFXN5-222	ENST00000497144	UNC13A	Q9UPW8	1703 aa		35.9	■■■■□ 3.34
SFXN5-222	ENST00000497144	ZCCHC6	Q5VYS8	1495 aa	Known RBP	35.73	■■■■□ 3.31
SFXN5-222	ENST00000497144	BICRA	Q9NZM4	1560 aa		35.66	■■■■□ 3.3
SFXN5-222	ENST00000497144	DCAF1	Q9Y4B6	1507 aa		35.56	■■■■□ 3.28
SFXN5-222	ENST00000497144	SHROOM4	Q9ULL8	1493 aa		35.18	■■■■□ 3.22
SFXN5-222	ENST00000497144	SCRIB	Q14160	1630 aa		35.13	■■■■□ 3.21
SFXN5-222	ENST00000497144	CC2D2A	Q9P2K1	1620 aa		35.03	■■■■□ 3.2
SFXN5-222	ENST00000497144	CECR2	Q9BXF3	1484 aa		35.02	■■■■□ 3.2
SFXN5-222	ENST00000497144	EIF4G1	Q04637	1599 aa	Known RBP	34.87	■■■■□ 3.17
SFXN5-222	ENST00000497144	DNAJC5	Q9H3Z4	198 aa		34.06	■■■■□ 3.04
SFXN5-222	ENST00000497144	CUX2	O14529	1486 aa		33.63	■■■□□ 2.97
SFXN5-222	ENST00000497144	NCAPD3	P42695	1498 aa		33.61	■■■□□ 2.97
SFXN5-222	ENST00000497144	ERCC6	Q03468	1493 aa		33.6	■■■□□ 2.97
SFXN5-222	ENST00000497144	ATAD2B	Q9ULI0	1458 aa		33.54	■■■□□ 2.96
SFXN5-222	ENST00000497144	SMARCA4	P51532	1647 aa		33.5	■■■□□ 2.95
SFXN5-222	ENST00000497144	SMARCA2	P51531	1590 aa		33.43	■■■□□ 2.94
SFXN5-222	ENST00000497144	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	33.4	■■■□□ 2.94
SFXN5-222	ENST00000497144	HMGXB3	Q12766	1538 aa		33.33	■■■□□ 2.93
SFXN5-222	ENST00000497144	BAZ1B	Q9UIG0	1483 aa	Known RBP	33.23	■■■□□ 2.91
SFXN5-222	ENST00000497144	MROH2B	Q7Z745	1585 aa		33.21	■■■□□ 2.91
SFXN5-222	ENST00000497144	NES	P48681	1621 aa		33.2	■■■□□ 2.91
SFXN5-222	ENST00000497144	PEG3	Q9GZU2	1588 aa		33.17	■■■□□ 2.9
SFXN5-222	ENST00000497144	THOC2	Q8NI27	1593 aa	Known RBP	32.96	■■■□□ 2.87
SFXN5-222	ENST00000497144	LAMC3	Q9Y6N6	1575 aa		32.95	■■■□□ 2.86
SFXN5-222	ENST00000497144	KIF21A	Q7Z4S6	1674 aa		32.78	■■■□□ 2.84
SFXN5-222	ENST00000497144	PDS5B	Q9NTI5	1447 aa		32.78	■■■□□ 2.84
SFXN5-222	ENST00000497144	WIZ	O95785	1651 aa		32.77	■■■□□ 2.84
SFXN5-222	ENST00000497144	RSF1	Q96T23	1441 aa	Predicted RBP	32.65	■■■□□ 2.82
SFXN5-222	ENST00000497144	CADPS	Q9ULU8	1353 aa		32.63	■■■□□ 2.81
SFXN5-222	ENST00000497144	MRC2	Q9UBG0	1479 aa		32.51	■■■□□ 2.79
SFXN5-222	ENST00000497144	TRIM41	Q8WV44	630 aa		32.47	■■■□□ 2.79
SFXN5-222	ENST00000497144	WDR62	O43379	1518 aa		32.42	■■■□□ 2.78
SFXN5-222	ENST00000497144	TOP2A	P11388	1531 aa	Known RBP	32.39	■■■□□ 2.78
SFXN5-222	ENST00000497144	CEP164	Q9UPV0	1460 aa		32.31	■■■□□ 2.76
SFXN5-222	ENST00000497144	CFTR	P13569	1480 aa		32.28	■■■□□ 2.76
SFXN5-222	ENST00000497144	FANCD2	Q9BXW9	1451 aa		32.24	■■■□□ 2.75
SFXN5-222	ENST00000497144	CCDC88B	A6NC98	1476 aa		32.07	■■■□□ 2.72
SFXN5-222	ENST00000497144	SUPT5H	O00267	1087 aa	Known RBP	32.06	■■■□□ 2.72
SFXN5-222	ENST00000497144	OSCAR	Q8IYS5	282 aa		32.05	■■■□□ 2.72
SFXN5-222	ENST00000497144	URB2	Q14146	1524 aa	Known RBP	31.95	■■■□□ 2.71
SFXN5-222	ENST00000497144	PRDM2	Q13029	1718 aa		31.78	■■■□□ 2.68
SFXN5-222	ENST00000497144	IFT140	Q96RY7	1462 aa		31.67	■■■□□ 2.66
SFXN5-222	ENST00000497144	RIMBP3C	A6NJZ7	1639 aa		31.65	■■■□□ 2.66
SFXN5-222	ENST00000497144	RIMBP3B	A6NNM3	1639 aa		31.65	■■■□□ 2.66
SFXN5-222	ENST00000497144	RIMBP3	Q9UFD9	1639 aa		31.65	■■■□□ 2.66
SFXN5-222	ENST00000497144	TOPBP1	Q92547	1522 aa		31.63	■■■□□ 2.65
SFXN5-222	ENST00000497144	ZNF608	Q9ULD9	1512 aa	Predicted RBP	31.63	■■■□□ 2.65
SFXN5-222	ENST00000497144	ABCC8	Q09428	1581 aa		31.57	■■■□□ 2.64
SFXN5-222	ENST00000497144	ARHGEF11	O15085	1522 aa		31.51	■■■□□ 2.63
SFXN5-222	ENST00000497144	DNMBP	Q6XZF7	1577 aa		31.51	■■■□□ 2.63
SFXN5-222	ENST00000497144	EIF4G3	O43432	1585 aa	Known RBP	31.46	■■■□□ 2.63
SFXN5-222	ENST00000497144	POLA1	P09884	1462 aa	Predicted RBP	31.33	■■■□□ 2.61
SFXN5-222	ENST00000497144	CYB5RL	Q6IPT4	315 aa		31.33	■■■□□ 2.61
SFXN5-222	ENST00000497144	AQR	O60306	1485 aa	Known RBP eCLIP	31.31	■■■□□ 2.6	2e-7	■■■■□ 22.1
SFXN5-222	ENST00000497144	CHD1	O14646	1710 aa		31.3	■■■□□ 2.6
SFXN5-222	ENST00000497144	TARBP1	Q13395	1621 aa	Known RBP	31.29	■■■□□ 2.6
SFXN5-222	ENST00000497144	FBLN2	P98095	1184 aa		31.26	■■■□□ 2.59
SFXN5-222	ENST00000497144	RAD54L2	Q9Y4B4	1467 aa		31.25	■■■□□ 2.59
SFXN5-222	ENST00000497144	SOGA1	O94964	1423 aa		31.24	■■■□□ 2.59
SFXN5-222	ENST00000497144	CUX1	P39880	1505 aa		31.18	■■■□□ 2.58
SFXN5-222	ENST00000497144	FGD5	Q6ZNL6	1462 aa		31.17	■■■□□ 2.58
SFXN5-222	ENST00000497144	TRH	P20396	242 aa	Predicted RBP	31.17	■■■□□ 2.58
SFXN5-222	ENST00000497144	TDRD9	Q8NDG6	1382 aa	Known RBP	31.17	■■■□□ 2.58
SFXN5-222	ENST00000497144	ARAP1	Q96P48	1450 aa		31.16	■■■□□ 2.58
SFXN5-222	ENST00000497144	SNAPC4	Q5SXM2	1469 aa		30.99	■■■□□ 2.55
SFXN5-222	ENST00000497144	WDR97	A6NE52	1622 aa		30.97	■■■□□ 2.55
SFXN5-222	ENST00000497144	CHMP7	Q8WUX9	453 aa	Predicted RBP	30.94	■■■□□ 2.54
SFXN5-222	ENST00000497144	CLASP1	Q7Z460	1538 aa		30.92	■■■□□ 2.54
SFXN5-222	ENST00000497144	GRIN2B	Q13224	1484 aa		30.91	■■■□□ 2.54
SFXN5-222	ENST00000497144	SYNJ1	O43426	1573 aa		30.91	■■■□□ 2.54
SFXN5-222	ENST00000497144	MAGI1	Q96QZ7	1491 aa	Predicted RBP	30.89	■■■□□ 2.54
SFXN5-222	ENST00000497144	GAPVD1	Q14C86	1478 aa		30.84	■■■□□ 2.53
SFXN5-222	ENST00000497144	ABCA10	Q8WWZ4	1543 aa		30.83	■■■□□ 2.53
SFXN5-222	ENST00000497144	SYNJ2	O15056	1496 aa		30.8	■■■□□ 2.52
SFXN5-222	ENST00000497144	WRN	Q14191	1432 aa	Predicted RBP eCLIP	30.8	■■■□□ 2.52
SFXN5-222	ENST00000497144	TOP2B	Q02880	1626 aa		30.71	■■■□□ 2.51
SFXN5-222	ENST00000497144	PBRM1	Q86U86	1689 aa		30.7	■■■□□ 2.5
SFXN5-222	ENST00000497144	ABCA5	Q8WWZ7	1642 aa		30.69	■■■□□ 2.5
SFXN5-222	ENST00000497144	BIVM-ERCC5	R4GMW8	1640 aa		30.66	■■■□□ 2.5
SFXN5-222	ENST00000497144	AEBP2	Q6ZN18	517 aa	Predicted RBP	30.59	■■■□□ 2.49
SFXN5-222	ENST00000497144	GRIN2A	Q12879	1464 aa		30.5	■■■□□ 2.47
SFXN5-222	ENST00000497144	ADAMTS12	P58397	1594 aa		30.47	■■■□□ 2.47
SFXN5-222	ENST00000497144	FHAD1	B1AJZ9	1412 aa		30.46	■■■□□ 2.47
SFXN5-222	ENST00000497144	ERICH3	Q5RHP9	1530 aa		30.42	■■■□□ 2.46
SFXN5-222	ENST00000497144	ERCC6L2	Q5T890	1561 aa		30.4	■■■□□ 2.46
SFXN5-222	ENST00000497144	NUP160	Q12769	1436 aa		30.39	■■■□□ 2.46
SFXN5-222	ENST00000497144	CEP170	Q5SW79	1584 aa		30.35	■■■□□ 2.45
SFXN5-222	ENST00000497144	CHIC1	Q5VXU3	224 aa		30.3	■■■□□ 2.44
SFXN5-222	ENST00000497144	SHROOM2	Q13796	1616 aa		30.25	■■■□□ 2.43
SFXN5-222	ENST00000497144	KIF27	Q86VH2	1401 aa		30.19	■■■□□ 2.42
SFXN5-222	ENST00000497144	IGF1R	P08069	1367 aa		30.18	■■■□□ 2.42

Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms