RNA–Protein interactions for RNA: ENST00000497094.6

MRPL48-205, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 4

Gene MRPL48, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-205ENST00000497094 NISCHQ9Y2I1 1504 aa23.39■■□□□ 1.34
MRPL48-205ENST00000497094 ABCC9O60706 1549 aa20.98■□□□□ 0.95
MRPL48-205ENST00000497094 CCDC180Q9P1Z9 1646 aa20.89■□□□□ 0.94
MRPL48-205ENST00000497094 AEBP2Q6ZN18 517 aaPredicted RBP19.97■□□□□ 0.79
MRPL48-205ENST00000497094 RB1CC1Q8TDY2 1594 aa19.92■□□□□ 0.78
MRPL48-205ENST00000497094 DCAF8L2P0C7V8 631 aa19.85■□□□□ 0.77
MRPL48-205ENST00000497094 NACADO15069 1562 aa19.79■□□□□ 0.76
MRPL48-205ENST00000497094 DNAJC5BQ9UF47 199 aa19.63■□□□□ 0.73
MRPL48-205ENST00000497094 PABPN1Q86U42 306 aaKnown RBP eCLIP19.58■□□□□ 0.72
MRPL48-205ENST00000497094 MYO15BQ96JP2 1530 aa19.52■□□□□ 0.72
MRPL48-205ENST00000497094 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
MRPL48-205ENST00000497094 ZCCHC6Q5VYS8 1495 aaKnown RBP19.4■□□□□ 0.7
MRPL48-205ENST00000497094 UNC13AQ9UPW8 1703 aa19.35■□□□□ 0.69
MRPL48-205ENST00000497094 BICRAQ9NZM4 1560 aa19.32■□□□□ 0.68
MRPL48-205ENST00000497094 DCAF1Q9Y4B6 1507 aa19.29■□□□□ 0.68
MRPL48-205ENST00000497094 SCRIBQ14160 1630 aa19.13■□□□□ 0.65
MRPL48-205ENST00000497094 SHROOM4Q9ULL8 1493 aa19.08■□□□□ 0.64
MRPL48-205ENST00000497094 CC2D2AQ9P2K1 1620 aa18.89■□□□□ 0.62
MRPL48-205ENST00000497094 CECR2Q9BXF3 1484 aa18.88■□□□□ 0.61
MRPL48-205ENST00000497094 EIF4G1Q04637 1599 aaKnown RBP18.88■□□□□ 0.61
MRPL48-205ENST00000497094 NCAPD3P42695 1498 aa18.3■□□□□ 0.52
MRPL48-205ENST00000497094 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
MRPL48-205ENST00000497094 SMARCA4P51532 1647 aa18.22■□□□□ 0.51
MRPL48-205ENST00000497094 SMARCA2P51531 1590 aa18.2■□□□□ 0.5
MRPL48-205ENST00000497094 BAZ1AQ9NRL2 1556 aaPredicted RBP18.16■□□□□ 0.5
MRPL48-205ENST00000497094 HMGXB3Q12766 1538 aa18.14■□□□□ 0.49
MRPL48-205ENST00000497094 ERCC6Q03468 1493 aa18.13■□□□□ 0.49
MRPL48-205ENST00000497094 BAZ1BQ9UIG0 1483 aaKnown RBP18.11■□□□□ 0.49
MRPL48-205ENST00000497094 MROH2BQ7Z745 1585 aa18.04■□□□□ 0.48
MRPL48-205ENST00000497094 CUX2O14529 1486 aa18.02■□□□□ 0.48
MRPL48-205ENST00000497094 PEG3Q9GZU2 1588 aa18.02■□□□□ 0.48
MRPL48-205ENST00000497094 NESP48681 1621 aa18.01■□□□□ 0.47
MRPL48-205ENST00000497094 DNAJC5Q9H3Z4 198 aa17.98■□□□□ 0.47
MRPL48-205ENST00000497094 LAMC3Q9Y6N6 1575 aa17.85■□□□□ 0.45
MRPL48-205ENST00000497094 PDS5BQ9NTI5 1447 aa17.8■□□□□ 0.44
MRPL48-205ENST00000497094 WIZO95785 1651 aa17.79■□□□□ 0.44
MRPL48-205ENST00000497094 THOC2Q8NI27 1593 aaKnown RBP17.77■□□□□ 0.44
MRPL48-205ENST00000497094 CADPSQ9ULU8 1353 aa17.77■□□□□ 0.43
MRPL48-205ENST00000497094 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
MRPL48-205ENST00000497094 KIF21AQ7Z4S6 1674 aa17.7■□□□□ 0.42
MRPL48-205ENST00000497094 MRC2Q9UBG0 1479 aa17.64■□□□□ 0.41
MRPL48-205ENST00000497094 TOP2AP11388 1531 aaKnown RBP17.59■□□□□ 0.41
MRPL48-205ENST00000497094 CEP164Q9UPV0 1460 aa17.58■□□□□ 0.41
MRPL48-205ENST00000497094 FANCD2Q9BXW9 1451 aa17.57■□□□□ 0.4
MRPL48-205ENST00000497094 WDR62O43379 1518 aa17.57■□□□□ 0.4
MRPL48-205ENST00000497094 CFTRP13569 1480 aa17.56■□□□□ 0.4
MRPL48-205ENST00000497094 CCDC88BA6NC98 1476 aa17.42■□□□□ 0.38
MRPL48-205ENST00000497094 URB2Q14146 1524 aaKnown RBP17.41■□□□□ 0.38
MRPL48-205ENST00000497094 TRIM41Q8WV44 630 aa17.28■□□□□ 0.36
MRPL48-205ENST00000497094 OSCARQ8IYS5 282 aa17.25■□□□□ 0.35
MRPL48-205ENST00000497094 PRDM2Q13029 1718 aa17.24■□□□□ 0.35
MRPL48-205ENST00000497094 IFT140Q96RY7 1462 aa17.23■□□□□ 0.35
MRPL48-205ENST00000497094 TOPBP1Q92547 1522 aa17.22■□□□□ 0.35
MRPL48-205ENST00000497094 ZNF608Q9ULD9 1512 aaPredicted RBP17.2■□□□□ 0.34
MRPL48-205ENST00000497094 PHF23Q9BUL5 403 aaPredicted RBP17.18■□□□□ 0.34
MRPL48-205ENST00000497094 ABCC8Q09428 1581 aa17.18■□□□□ 0.34
MRPL48-205ENST00000497094 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
MRPL48-205ENST00000497094 EIF4G3O43432 1585 aaKnown RBP17.07■□□□□ 0.32
MRPL48-205ENST00000497094 AQRO60306 1485 aaKnown RBP eCLIP17.06■□□□□ 0.32
MRPL48-205ENST00000497094 POLA1P09884 1462 aaPredicted RBP17.05■□□□□ 0.32
MRPL48-205ENST00000497094 SUPT5HO00267 1087 aaKnown RBP17.03■□□□□ 0.32
MRPL48-205ENST00000497094 TARBP1Q13395 1621 aaKnown RBP17.03■□□□□ 0.32
MRPL48-205ENST00000497094 RAD54L2Q9Y4B4 1467 aa17.01■□□□□ 0.31
MRPL48-205ENST00000497094 SOGA1O94964 1423 aa17.01■□□□□ 0.31
MRPL48-205ENST00000497094 FBLN2P98095 1184 aa17■□□□□ 0.31
MRPL48-205ENST00000497094 TDRD9Q8NDG6 1382 aaKnown RBP16.99■□□□□ 0.31
MRPL48-205ENST00000497094 FGD5Q6ZNL6 1462 aa16.97■□□□□ 0.31
MRPL48-205ENST00000497094 RIMBP3CA6NJZ7 1639 aa16.95■□□□□ 0.3
MRPL48-205ENST00000497094 RIMBP3BA6NNM3 1639 aa16.95■□□□□ 0.3
MRPL48-205ENST00000497094 RIMBP3Q9UFD9 1639 aa16.95■□□□□ 0.3
MRPL48-205ENST00000497094 CUX1P39880 1505 aa16.95■□□□□ 0.3
MRPL48-205ENST00000497094 ARHGEF11O15085 1522 aa16.94■□□□□ 0.3
MRPL48-205ENST00000497094 SNAPC4Q5SXM2 1469 aa16.88■□□□□ 0.29
MRPL48-205ENST00000497094 CHD1O14646 1710 aa16.87■□□□□ 0.29
MRPL48-205ENST00000497094 CYB5RLQ6IPT4 315 aa16.87■□□□□ 0.29
MRPL48-205ENST00000497094 CHMP7Q8WUX9 453 aaPredicted RBP16.85■□□□□ 0.29
MRPL48-205ENST00000497094 GRIN2BQ13224 1484 aa16.84■□□□□ 0.29
MRPL48-205ENST00000497094 WDR97A6NE52 1622 aa16.84■□□□□ 0.29
MRPL48-205ENST00000497094 MAGI1Q96QZ7 1491 aaPredicted RBP16.82■□□□□ 0.28
MRPL48-205ENST00000497094 SENP3Q9H4L4 574 aaPredicted RBP16.82■□□□□ 0.28
MRPL48-205ENST00000497094 GAPVD1Q14C86 1478 aa16.79■□□□□ 0.28
MRPL48-205ENST00000497094 SYNJ2O15056 1496 aa16.78■□□□□ 0.28
MRPL48-205ENST00000497094 ARAP1Q96P48 1450 aa16.78■□□□□ 0.28
MRPL48-205ENST00000497094 ABCA10Q8WWZ4 1543 aa16.76■□□□□ 0.27
MRPL48-205ENST00000497094 SYNJ1O43426 1573 aa16.74■□□□□ 0.27
MRPL48-205ENST00000497094 CLASP1Q7Z460 1538 aa16.74■□□□□ 0.27
MRPL48-205ENST00000497094 WRNQ14191 1432 aaPredicted RBP eCLIP16.73■□□□□ 0.27
MRPL48-205ENST00000497094 ABCA5Q8WWZ7 1642 aa16.7■□□□□ 0.26
MRPL48-205ENST00000497094 TRHP20396 242 aaPredicted RBP16.69■□□□□ 0.26
MRPL48-205ENST00000497094 PBRM1Q86U86 1689 aa16.69■□□□□ 0.26
MRPL48-205ENST00000497094 TOP2BQ02880 1626 aa16.66■□□□□ 0.26
MRPL48-205ENST00000497094 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
MRPL48-205ENST00000497094 GRIN2AQ12879 1464 aa16.61■□□□□ 0.25
MRPL48-205ENST00000497094 ADAMTS12P58397 1594 aa16.59■□□□□ 0.25
MRPL48-205ENST00000497094 FHAD1B1AJZ9 1412 aa16.58■□□□□ 0.24
MRPL48-205ENST00000497094 NUP160Q12769 1436 aa16.55■□□□□ 0.24
MRPL48-205ENST00000497094 ERICH3Q5RHP9 1530 aa16.54■□□□□ 0.24
MRPL48-205ENST00000497094 CEP170Q5SW79 1584 aa16.53■□□□□ 0.24
MRPL48-205ENST00000497094 ERCC6L2Q5T890 1561 aa16.5■□□□□ 0.23
MRPL48-205ENST00000497094 PRG4Q92954 1404 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms