RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 NISCHQ9Y2I1 1504 aa25.14■■□□□ 1.62
SRSF4-205ENST00000497015 ABCC9O60706 1549 aa23.38■■□□□ 1.33
SRSF4-205ENST00000497015 DNAJC5BQ9UF47 199 aa22.67■■□□□ 1.22
SRSF4-205ENST00000497015 CCDC180Q9P1Z9 1646 aa22.64■■□□□ 1.21
SRSF4-205ENST00000497015 RB1CC1Q8TDY2 1594 aa21.87■■□□□ 1.09
SRSF4-205ENST00000497015 PABPN1Q86U42 306 aaKnown RBP eCLIP21.78■■□□□ 1.08
SRSF4-205ENST00000497015 NACADO15069 1562 aa21.61■■□□□ 1.05
SRSF4-205ENST00000497015 CHIC1Q5VXU3 224 aa21.58■■□□□ 1.05
SRSF4-205ENST00000497015 DCAF8L2P0C7V8 631 aa21.54■■□□□ 1.04
SRSF4-205ENST00000497015 UNC13AQ9UPW8 1703 aa21.41■■□□□ 1.02
SRSF4-205ENST00000497015 BICRAQ9NZM4 1560 aa21.4■■□□□ 1.02
SRSF4-205ENST00000497015 MYO15BQ96JP2 1530 aa21.14■□□□□ 0.97
SRSF4-205ENST00000497015 DNAJC5Q9H3Z4 198 aa21.09■□□□□ 0.97
SRSF4-205ENST00000497015 CECR2Q9BXF3 1484 aa21.08■□□□□ 0.97
SRSF4-205ENST00000497015 CC2D2AQ9P2K1 1620 aa21.04■□□□□ 0.96
SRSF4-205ENST00000497015 SHROOM4Q9ULL8 1493 aa20.86■□□□□ 0.93
SRSF4-205ENST00000497015 EIF4G1Q04637 1599 aaKnown RBP20.85■□□□□ 0.93
SRSF4-205ENST00000497015 AEBP2Q6ZN18 517 aaPredicted RBP20.83■□□□□ 0.93
SRSF4-205ENST00000497015 SCRIBQ14160 1630 aa20.69■□□□□ 0.9
SRSF4-205ENST00000497015 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
SRSF4-205ENST00000497015 DCAF1Q9Y4B6 1507 aa20.67■□□□□ 0.9
SRSF4-205ENST00000497015 CUX2O14529 1486 aa20.29■□□□□ 0.84
SRSF4-205ENST00000497015 ERCC6Q03468 1493 aa20.11■□□□□ 0.81
SRSF4-205ENST00000497015 NCAPD3P42695 1498 aa20.06■□□□□ 0.8
SRSF4-205ENST00000497015 NESP48681 1621 aa19.97■□□□□ 0.79
SRSF4-205ENST00000497015 ATAD2BQ9ULI0 1458 aa19.92■□□□□ 0.78
SRSF4-205ENST00000497015 TRIM41Q8WV44 630 aa19.89■□□□□ 0.77
SRSF4-205ENST00000497015 THOC2Q8NI27 1593 aaKnown RBP19.76■□□□□ 0.75
SRSF4-205ENST00000497015 HMGXB3Q12766 1538 aa19.75■□□□□ 0.75
SRSF4-205ENST00000497015 SMARCA2P51531 1590 aa19.7■□□□□ 0.74
SRSF4-205ENST00000497015 SMARCA4P51532 1647 aa19.67■□□□□ 0.74
SRSF4-205ENST00000497015 BAZ1BQ9UIG0 1483 aaKnown RBP19.6■□□□□ 0.73
SRSF4-205ENST00000497015 LAMC3Q9Y6N6 1575 aa19.58■□□□□ 0.73
SRSF4-205ENST00000497015 KIF21AQ7Z4S6 1674 aa19.56■□□□□ 0.72
SRSF4-205ENST00000497015 PDS5BQ9NTI5 1447 aa19.52■□□□□ 0.72
SRSF4-205ENST00000497015 PEG3Q9GZU2 1588 aa19.49■□□□□ 0.71
SRSF4-205ENST00000497015 BAZ1AQ9NRL2 1556 aaPredicted RBP19.46■□□□□ 0.71
SRSF4-205ENST00000497015 CADPSQ9ULU8 1353 aa19.43■□□□□ 0.7
SRSF4-205ENST00000497015 MROH2BQ7Z745 1585 aa19.41■□□□□ 0.7
SRSF4-205ENST00000497015 MRC2Q9UBG0 1479 aa19.39■□□□□ 0.69
SRSF4-205ENST00000497015 OSCARQ8IYS5 282 aa19.38■□□□□ 0.69
SRSF4-205ENST00000497015 WDR62O43379 1518 aa19.36■□□□□ 0.69
SRSF4-205ENST00000497015 CEP164Q9UPV0 1460 aa19.18■□□□□ 0.66
SRSF4-205ENST00000497015 FANCD2Q9BXW9 1451 aa19.16■□□□□ 0.66
SRSF4-205ENST00000497015 RIMBP3CA6NJZ7 1639 aa19.11■□□□□ 0.65
SRSF4-205ENST00000497015 RIMBP3BA6NNM3 1639 aa19.11■□□□□ 0.65
SRSF4-205ENST00000497015 RIMBP3Q9UFD9 1639 aa19.11■□□□□ 0.65
SRSF4-205ENST00000497015 WIZO95785 1651 aa19.11■□□□□ 0.65
SRSF4-205ENST00000497015 URB2Q14146 1524 aaKnown RBP19.09■□□□□ 0.65
SRSF4-205ENST00000497015 CFTRP13569 1480 aa19.07■□□□□ 0.64
SRSF4-205ENST00000497015 ARHGEF11O15085 1522 aa19■□□□□ 0.63
SRSF4-205ENST00000497015 CYB5RLQ6IPT4 315 aa19■□□□□ 0.63
SRSF4-205ENST00000497015 PHF23Q9BUL5 403 aaPredicted RBP19■□□□□ 0.63
SRSF4-205ENST00000497015 ZNF608Q9ULD9 1512 aaPredicted RBP18.97■□□□□ 0.63
SRSF4-205ENST00000497015 TRHP20396 242 aaPredicted RBP18.9■□□□□ 0.62
SRSF4-205ENST00000497015 IFT140Q96RY7 1462 aa18.84■□□□□ 0.61
SRSF4-205ENST00000497015 RSF1Q96T23 1441 aaPredicted RBP18.82■□□□□ 0.6
SRSF4-205ENST00000497015 ARAP1Q96P48 1450 aa18.81■□□□□ 0.6
SRSF4-205ENST00000497015 TOP2AP11388 1531 aaKnown RBP18.76■□□□□ 0.59
SRSF4-205ENST00000497015 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
SRSF4-205ENST00000497015 AQRO60306 1485 aaKnown RBP eCLIP18.74■□□□□ 0.591e-7■■□□□ 14.4
SRSF4-205ENST00000497015 EIF4G3O43432 1585 aaKnown RBP18.7■□□□□ 0.58
SRSF4-205ENST00000497015 FBLN2P98095 1184 aa18.69■□□□□ 0.58
SRSF4-205ENST00000497015 CCDC88BA6NC98 1476 aa18.67■□□□□ 0.58
SRSF4-205ENST00000497015 CHD1O14646 1710 aa18.66■□□□□ 0.58
SRSF4-205ENST00000497015 TARBP1Q13395 1621 aaKnown RBP18.62■□□□□ 0.57
SRSF4-205ENST00000497015 PRDM2Q13029 1718 aa18.62■□□□□ 0.57
SRSF4-205ENST00000497015 ABCC8Q09428 1581 aa18.58■□□□□ 0.56
SRSF4-205ENST00000497015 DNMBPQ6XZF7 1577 aa18.56■□□□□ 0.56
SRSF4-205ENST00000497015 TDRD9Q8NDG6 1382 aaKnown RBP18.54■□□□□ 0.56
SRSF4-205ENST00000497015 RAD54L2Q9Y4B4 1467 aa18.53■□□□□ 0.56
SRSF4-205ENST00000497015 POLA1P09884 1462 aaPredicted RBP18.52■□□□□ 0.56
SRSF4-205ENST00000497015 CLASP1Q7Z460 1538 aa18.49■□□□□ 0.55
SRSF4-205ENST00000497015 SOGA1O94964 1423 aa18.46■□□□□ 0.55
SRSF4-205ENST00000497015 CHMP7Q8WUX9 453 aaPredicted RBP18.44■□□□□ 0.54
SRSF4-205ENST00000497015 SNAPC4Q5SXM2 1469 aa18.44■□□□□ 0.54
SRSF4-205ENST00000497015 GAPVD1Q14C86 1478 aa18.35■□□□□ 0.53
SRSF4-205ENST00000497015 SYNJ1O43426 1573 aa18.34■□□□□ 0.53
SRSF4-205ENST00000497015 FGD5Q6ZNL6 1462 aa18.32■□□□□ 0.52
SRSF4-205ENST00000497015 MAGI1Q96QZ7 1491 aaPredicted RBP18.32■□□□□ 0.52
SRSF4-205ENST00000497015 SYNJ2O15056 1496 aa18.3■□□□□ 0.52
SRSF4-205ENST00000497015 GRIN2BQ13224 1484 aa18.29■□□□□ 0.52
SRSF4-205ENST00000497015 ERCC6L2Q5T890 1561 aa18.26■□□□□ 0.51
SRSF4-205ENST00000497015 CUX1P39880 1505 aa18.24■□□□□ 0.51
SRSF4-205ENST00000497015 WDR97A6NE52 1622 aa18.23■□□□□ 0.51
SRSF4-205ENST00000497015 PBRM1Q86U86 1689 aa18.1■□□□□ 0.49
SRSF4-205ENST00000497015 KDM4FA0A1W2PPD8 638 aa18.1■□□□□ 0.49
SRSF4-205ENST00000497015 ILDR1Q86SU0 546 aaPredicted RBP18.1■□□□□ 0.49
SRSF4-205ENST00000497015 CEP170Q5SW79 1584 aa18.08■□□□□ 0.49
SRSF4-205ENST00000497015 PLPPR3Q6T4P5 718 aa18.08■□□□□ 0.48
SRSF4-205ENST00000497015 ABCA10Q8WWZ4 1543 aa18.07■□□□□ 0.48
SRSF4-205ENST00000497015 GRIN2AQ12879 1464 aa18.07■□□□□ 0.48
SRSF4-205ENST00000497015 NUP160Q12769 1436 aa18.06■□□□□ 0.48
SRSF4-205ENST00000497015 KIF13AQ9H1H9 1805 aa18.06■□□□□ 0.48
SRSF4-205ENST00000497015 ABCA5Q8WWZ7 1642 aa18.05■□□□□ 0.48
SRSF4-205ENST00000497015 FAM69CQ0P6D2 419 aa18■□□□□ 0.47
SRSF4-205ENST00000497015 SHROOM2Q13796 1616 aa18■□□□□ 0.47
SRSF4-205ENST00000497015 JPH4Q96JJ6 628 aa17.95■□□□□ 0.46
SRSF4-205ENST00000497015 PRG4Q92954 1404 aaPredicted RBP17.95■□□□□ 0.46
SRSF4-205ENST00000497015 ABCC10Q5T3U5 1492 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms