RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 NISCHQ9Y2I1 1504 aa30.75■■■□□ 2.51
CLDN12-213ENST00000496677 CCDC180Q9P1Z9 1646 aa27.43■■□□□ 1.98
CLDN12-213ENST00000496677 ABCC9O60706 1549 aa27.18■■□□□ 1.94
CLDN12-213ENST00000496677 RB1CC1Q8TDY2 1594 aa25.98■■□□□ 1.75
CLDN12-213ENST00000496677 NACADO15069 1562 aa25.9■■□□□ 1.74
CLDN12-213ENST00000496677 DCAF8L2P0C7V8 631 aa25.77■■□□□ 1.72
CLDN12-213ENST00000496677 MYO15BQ96JP2 1530 aa25.68■■□□□ 1.7
CLDN12-213ENST00000496677 ZCCHC6Q5VYS8 1495 aaKnown RBP25.53■■□□□ 1.68
CLDN12-213ENST00000496677 DCAF1Q9Y4B6 1507 aa25.44■■□□□ 1.66
CLDN12-213ENST00000496677 UNC13AQ9UPW8 1703 aa25.39■■□□□ 1.65
CLDN12-213ENST00000496677 PABPN1Q86U42 306 aaKnown RBP eCLIP25.38■■□□□ 1.65
CLDN12-213ENST00000496677 DNAJC5BQ9UF47 199 aa25.38■■□□□ 1.65
CLDN12-213ENST00000496677 BICRAQ9NZM4 1560 aa25.28■■□□□ 1.64
CLDN12-213ENST00000496677 AEBP2Q6ZN18 517 aaPredicted RBP25.08■■□□□ 1.61
CLDN12-213ENST00000496677 SCRIBQ14160 1630 aa24.98■■□□□ 1.59
CLDN12-213ENST00000496677 SHROOM4Q9ULL8 1493 aa24.94■■□□□ 1.58
CLDN12-213ENST00000496677 EIF4G1Q04637 1599 aaKnown RBP24.59■■□□□ 1.53
CLDN12-213ENST00000496677 CC2D2AQ9P2K1 1620 aa24.57■■□□□ 1.52
CLDN12-213ENST00000496677 CECR2Q9BXF3 1484 aa24.46■■□□□ 1.51
CLDN12-213ENST00000496677 CHIC1Q5VXU3 224 aa24.15■■□□□ 1.46
CLDN12-213ENST00000496677 NCAPD3P42695 1498 aa23.95■■□□□ 1.42
CLDN12-213ENST00000496677 ATAD2BQ9ULI0 1458 aa23.9■■□□□ 1.42
CLDN12-213ENST00000496677 SMARCA4P51532 1647 aa23.9■■□□□ 1.42
CLDN12-213ENST00000496677 BAZ1AQ9NRL2 1556 aaPredicted RBP23.82■■□□□ 1.4
CLDN12-213ENST00000496677 SMARCA2P51531 1590 aa23.79■■□□□ 1.4
CLDN12-213ENST00000496677 HMGXB3Q12766 1538 aa23.74■■□□□ 1.39
CLDN12-213ENST00000496677 PEG3Q9GZU2 1588 aa23.71■■□□□ 1.39
CLDN12-213ENST00000496677 MROH2BQ7Z745 1585 aa23.7■■□□□ 1.38
CLDN12-213ENST00000496677 BAZ1BQ9UIG0 1483 aaKnown RBP23.62■■□□□ 1.37
CLDN12-213ENST00000496677 NESP48681 1621 aa23.45■■□□□ 1.34
CLDN12-213ENST00000496677 WIZO95785 1651 aa23.39■■□□□ 1.34
CLDN12-213ENST00000496677 ERCC6Q03468 1493 aa23.39■■□□□ 1.34
CLDN12-213ENST00000496677 CUX2O14529 1486 aa23.33■■□□□ 1.33
CLDN12-213ENST00000496677 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.32
CLDN12-213ENST00000496677 LAMC3Q9Y6N6 1575 aa23.31■■□□□ 1.32
CLDN12-213ENST00000496677 CADPSQ9ULU8 1353 aa23.22■■□□□ 1.31
CLDN12-213ENST00000496677 PDS5BQ9NTI5 1447 aa23.16■■□□□ 1.3
CLDN12-213ENST00000496677 THOC2Q8NI27 1593 aaKnown RBP23.14■■□□□ 1.29
CLDN12-213ENST00000496677 TOP2AP11388 1531 aaKnown RBP23.12■■□□□ 1.29
CLDN12-213ENST00000496677 KIF21AQ7Z4S6 1674 aa23.1■■□□□ 1.29
CLDN12-213ENST00000496677 DNAJC5Q9H3Z4 198 aa23.08■■□□□ 1.29
CLDN12-213ENST00000496677 CFTRP13569 1480 aa23.02■■□□□ 1.28
CLDN12-213ENST00000496677 MRC2Q9UBG0 1479 aa22.95■■□□□ 1.26
CLDN12-213ENST00000496677 FANCD2Q9BXW9 1451 aa22.92■■□□□ 1.26
CLDN12-213ENST00000496677 WDR62O43379 1518 aa22.9■■□□□ 1.26
CLDN12-213ENST00000496677 CCDC88BA6NC98 1476 aa22.9■■□□□ 1.26
CLDN12-213ENST00000496677 CEP164Q9UPV0 1460 aa22.89■■□□□ 1.25
CLDN12-213ENST00000496677 URB2Q14146 1524 aaKnown RBP22.74■■□□□ 1.23
CLDN12-213ENST00000496677 PRDM2Q13029 1718 aa22.71■■□□□ 1.23
CLDN12-213ENST00000496677 TOPBP1Q92547 1522 aa22.53■■□□□ 1.2
CLDN12-213ENST00000496677 ABCC8Q09428 1581 aa22.49■■□□□ 1.19
CLDN12-213ENST00000496677 IFT140Q96RY7 1462 aa22.45■■□□□ 1.18
CLDN12-213ENST00000496677 DNMBPQ6XZF7 1577 aa22.45■■□□□ 1.18
CLDN12-213ENST00000496677 SUPT5HO00267 1087 aaKnown RBP22.42■■□□□ 1.18
CLDN12-213ENST00000496677 ZNF608Q9ULD9 1512 aaPredicted RBP22.41■■□□□ 1.18
CLDN12-213ENST00000496677 OSCARQ8IYS5 282 aa22.33■■□□□ 1.17
CLDN12-213ENST00000496677 TARBP1Q13395 1621 aaKnown RBP22.31■■□□□ 1.16
CLDN12-213ENST00000496677 POLA1P09884 1462 aaPredicted RBP22.31■■□□□ 1.16
CLDN12-213ENST00000496677 CUX1P39880 1505 aa22.25■■□□□ 1.15
CLDN12-213ENST00000496677 EIF4G3O43432 1585 aaKnown RBP22.25■■□□□ 1.15
CLDN12-213ENST00000496677 AQRO60306 1485 aaKnown RBP eCLIP22.24■■□□□ 1.151e-6■■□□□ 14.5
CLDN12-213ENST00000496677 RAD54L2Q9Y4B4 1467 aa22.23■■□□□ 1.15
CLDN12-213ENST00000496677 SOGA1O94964 1423 aa22.23■■□□□ 1.15
CLDN12-213ENST00000496677 FGD5Q6ZNL6 1462 aa22.2■■□□□ 1.14
CLDN12-213ENST00000496677 TDRD9Q8NDG6 1382 aaKnown RBP22.15■■□□□ 1.14
CLDN12-213ENST00000496677 WDR97A6NE52 1622 aa22.08■■□□□ 1.13
CLDN12-213ENST00000496677 TRIM41Q8WV44 630 aa22.07■■□□□ 1.12
CLDN12-213ENST00000496677 CHD1O14646 1710 aa22.02■■□□□ 1.12
CLDN12-213ENST00000496677 SNAPC4Q5SXM2 1469 aa21.99■■□□□ 1.11
CLDN12-213ENST00000496677 ABCA10Q8WWZ4 1543 aa21.99■■□□□ 1.11
CLDN12-213ENST00000496677 GRIN2BQ13224 1484 aa21.98■■□□□ 1.11
CLDN12-213ENST00000496677 FBLN2P98095 1184 aa21.98■■□□□ 1.11
CLDN12-213ENST00000496677 RIMBP3CA6NJZ7 1639 aa21.97■■□□□ 1.11
CLDN12-213ENST00000496677 RIMBP3BA6NNM3 1639 aa21.97■■□□□ 1.11
CLDN12-213ENST00000496677 RIMBP3Q9UFD9 1639 aa21.97■■□□□ 1.11
CLDN12-213ENST00000496677 WRNQ14191 1432 aaPredicted RBP eCLIP21.95■■□□□ 1.1
CLDN12-213ENST00000496677 MAGI1Q96QZ7 1491 aaPredicted RBP21.95■■□□□ 1.1
CLDN12-213ENST00000496677 GAPVD1Q14C86 1478 aa21.94■■□□□ 1.1
CLDN12-213ENST00000496677 ARHGEF11O15085 1522 aa21.94■■□□□ 1.1
CLDN12-213ENST00000496677 TOP2BQ02880 1626 aa21.94■■□□□ 1.1
CLDN12-213ENST00000496677 BIVM-ERCC5R4GMW8 1640 aa21.93■■□□□ 1.1
CLDN12-213ENST00000496677 SYNJ1O43426 1573 aa21.92■■□□□ 1.1
CLDN12-213ENST00000496677 ABCA5Q8WWZ7 1642 aa21.91■■□□□ 1.1
CLDN12-213ENST00000496677 CHMP7Q8WUX9 453 aaPredicted RBP21.89■■□□□ 1.09
CLDN12-213ENST00000496677 SYNJ2O15056 1496 aa21.88■■□□□ 1.09
CLDN12-213ENST00000496677 PBRM1Q86U86 1689 aa21.86■■□□□ 1.09
CLDN12-213ENST00000496677 CLASP1Q7Z460 1538 aa21.83■■□□□ 1.09
CLDN12-213ENST00000496677 CYB5RLQ6IPT4 315 aa21.77■■□□□ 1.08
CLDN12-213ENST00000496677 ARAP1Q96P48 1450 aa21.77■■□□□ 1.07
CLDN12-213ENST00000496677 ADAMTS12P58397 1594 aa21.7■■□□□ 1.06
CLDN12-213ENST00000496677 GRIN2AQ12879 1464 aa21.7■■□□□ 1.06
CLDN12-213ENST00000496677 ERICH3Q5RHP9 1530 aa21.7■■□□□ 1.06
CLDN12-213ENST00000496677 FHAD1B1AJZ9 1412 aa21.68■■□□□ 1.06
CLDN12-213ENST00000496677 SENP3Q9H4L4 574 aaPredicted RBP21.66■■□□□ 1.06
CLDN12-213ENST00000496677 NUP160Q12769 1436 aa21.65■■□□□ 1.06
CLDN12-213ENST00000496677 CEP170Q5SW79 1584 aa21.61■■□□□ 1.05
CLDN12-213ENST00000496677 IGF1RP08069 1367 aa21.55■■□□□ 1.04
CLDN12-213ENST00000496677 ERCC6L2Q5T890 1561 aa21.52■■□□□ 1.04
CLDN12-213ENST00000496677 KIF27Q86VH2 1401 aa21.51■■□□□ 1.03
CLDN12-213ENST00000496677 SHROOM2Q13796 1616 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms