RNA–Protein interactions for RNA: ENST00000496675.1

PCNX2-216, Transcript of pecanex 2, humanhuman

TSL 2

Gene PCNX2, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-216ENST00000496675 NISCHQ9Y2I1 1504 aa44.79■■■■■ 4.76
PCNX2-216ENST00000496675 ABCC9O60706 1549 aa42.13■■■■■ 4.33
PCNX2-216ENST00000496675 CCDC180Q9P1Z9 1646 aa40.73■■■■■ 4.11
PCNX2-216ENST00000496675 DNAJC5BQ9UF47 199 aa40.72■■■■■ 4.11
PCNX2-216ENST00000496675 RB1CC1Q8TDY2 1594 aa39.49■■■■□ 3.91
PCNX2-216ENST00000496675 PABPN1Q86U42 306 aaKnown RBP eCLIP39.07■■■■□ 3.85
PCNX2-216ENST00000496675 NACADO15069 1562 aa38.87■■■■□ 3.81
PCNX2-216ENST00000496675 DCAF8L2P0C7V8 631 aa38.59■■■■□ 3.77
PCNX2-216ENST00000496675 UNC13AQ9UPW8 1703 aa38.51■■■■□ 3.76
PCNX2-216ENST00000496675 DNAJC5Q9H3Z4 198 aa38.42■■■■□ 3.74
PCNX2-216ENST00000496675 BICRAQ9NZM4 1560 aa38.32■■■■□ 3.73
PCNX2-216ENST00000496675 CECR2Q9BXF3 1484 aa38.09■■■■□ 3.69
PCNX2-216ENST00000496675 CC2D2AQ9P2K1 1620 aa37.94■■■■□ 3.66
PCNX2-216ENST00000496675 MYO15BQ96JP2 1530 aa37.87■■■■□ 3.65
PCNX2-216ENST00000496675 SHROOM4Q9ULL8 1493 aa37.69■■■■□ 3.62
PCNX2-216ENST00000496675 EIF4G1Q04637 1599 aaKnown RBP37.53■■■■□ 3.6
PCNX2-216ENST00000496675 SCRIBQ14160 1630 aa37.07■■■■□ 3.53
PCNX2-216ENST00000496675 DCAF1Q9Y4B6 1507 aa36.89■■■■□ 3.5
PCNX2-216ENST00000496675 CUX2O14529 1486 aa36.84■■■■□ 3.49
PCNX2-216ENST00000496675 ZCCHC6Q5VYS8 1495 aaKnown RBP36.8■■■■□ 3.48
PCNX2-216ENST00000496675 ERCC6Q03468 1493 aa36.51■■■■□ 3.44
PCNX2-216ENST00000496675 TRIM41Q8WV44 630 aa36.24■■■■□ 3.39
PCNX2-216ENST00000496675 NCAPD3P42695 1498 aa35.92■■■■□ 3.34
PCNX2-216ENST00000496675 NESP48681 1621 aa35.79■■■■□ 3.32
PCNX2-216ENST00000496675 THOC2Q8NI27 1593 aaKnown RBP35.63■■■■□ 3.29
PCNX2-216ENST00000496675 ATAD2BQ9ULI0 1458 aa35.61■■■■□ 3.29
PCNX2-216ENST00000496675 HMGXB3Q12766 1538 aa35.49■■■■□ 3.27
PCNX2-216ENST00000496675 SMARCA2P51531 1590 aa35.44■■■■□ 3.26
PCNX2-216ENST00000496675 LAMC3Q9Y6N6 1575 aa35.31■■■■□ 3.24
PCNX2-216ENST00000496675 KIF21AQ7Z4S6 1674 aa35.24■■■■□ 3.23
PCNX2-216ENST00000496675 BAZ1BQ9UIG0 1483 aaKnown RBP35.22■■■■□ 3.23
PCNX2-216ENST00000496675 PDS5BQ9NTI5 1447 aa35.22■■■■□ 3.23
PCNX2-216ENST00000496675 SMARCA4P51532 1647 aa35.21■■■■□ 3.23
PCNX2-216ENST00000496675 OSCARQ8IYS5 282 aa35.04■■■■□ 3.2
PCNX2-216ENST00000496675 BAZ1AQ9NRL2 1556 aaPredicted RBP35.02■■■■□ 3.2
PCNX2-216ENST00000496675 MRC2Q9UBG0 1479 aa34.95■■■■□ 3.19
PCNX2-216ENST00000496675 WDR62O43379 1518 aa34.86■■■■□ 3.17
PCNX2-216ENST00000496675 PEG3Q9GZU2 1588 aa34.85■■■■□ 3.17
PCNX2-216ENST00000496675 CADPSQ9ULU8 1353 aa34.8■■■■□ 3.16
PCNX2-216ENST00000496675 RIMBP3CA6NJZ7 1639 aa34.62■■■■□ 3.13
PCNX2-216ENST00000496675 RIMBP3BA6NNM3 1639 aa34.62■■■■□ 3.13
PCNX2-216ENST00000496675 RIMBP3Q9UFD9 1639 aa34.62■■■■□ 3.13
PCNX2-216ENST00000496675 CEP164Q9UPV0 1460 aa34.55■■■■□ 3.12
PCNX2-216ENST00000496675 MROH2BQ7Z745 1585 aa34.49■■■■□ 3.11
PCNX2-216ENST00000496675 AEBP2Q6ZN18 517 aaPredicted RBP34.44■■■■□ 3.1
PCNX2-216ENST00000496675 TRHP20396 242 aaPredicted RBP34.42■■■■□ 3.1
PCNX2-216ENST00000496675 FANCD2Q9BXW9 1451 aa34.39■■■■□ 3.1
PCNX2-216ENST00000496675 ARHGEF11O15085 1522 aa34.38■■■■□ 3.09
PCNX2-216ENST00000496675 CYB5RLQ6IPT4 315 aa34.32■■■■□ 3.08
PCNX2-216ENST00000496675 URB2Q14146 1524 aaKnown RBP34.16■■■■□ 3.06
PCNX2-216ENST00000496675 CFTRP13569 1480 aa34.07■■■■□ 3.05
PCNX2-216ENST00000496675 WIZO95785 1651 aa34.01■■■■□ 3.04
PCNX2-216ENST00000496675 ZNF608Q9ULD9 1512 aaPredicted RBP33.97■■■■□ 3.03
PCNX2-216ENST00000496675 ARAP1Q96P48 1450 aa33.94■■■■□ 3.02
PCNX2-216ENST00000496675 IFT140Q96RY7 1462 aa33.91■■■■□ 3.02
PCNX2-216ENST00000496675 RSF1Q96T23 1441 aaPredicted RBP33.74■■■□□ 2.99
PCNX2-216ENST00000496675 FBLN2P98095 1184 aa33.69■■■□□ 2.98
PCNX2-216ENST00000496675 CHD1O14646 1710 aa33.69■■■□□ 2.98
PCNX2-216ENST00000496675 EIF4G3O43432 1585 aaKnown RBP33.68■■■□□ 2.98
PCNX2-216ENST00000496675 TOPBP1Q92547 1522 aa33.57■■■□□ 2.96
PCNX2-216ENST00000496675 PRDM2Q13029 1718 aa33.56■■■□□ 2.96
PCNX2-216ENST00000496675 AQRO60306 1485 aaKnown RBP eCLIP33.53■■■□□ 2.96
PCNX2-216ENST00000496675 TOP2AP11388 1531 aaKnown RBP33.48■■■□□ 2.95
PCNX2-216ENST00000496675 ABCC8Q09428 1581 aa33.44■■■□□ 2.94
PCNX2-216ENST00000496675 TARBP1Q13395 1621 aaKnown RBP33.34■■■□□ 2.93
PCNX2-216ENST00000496675 DNMBPQ6XZF7 1577 aa33.31■■■□□ 2.92
PCNX2-216ENST00000496675 CLASP1Q7Z460 1538 aa33.26■■■□□ 2.91
PCNX2-216ENST00000496675 CHMP7Q8WUX9 453 aaPredicted RBP33.2■■■□□ 2.91
PCNX2-216ENST00000496675 SYNJ1O43426 1573 aa33.17■■■□□ 2.9
PCNX2-216ENST00000496675 CCDC88BA6NC98 1476 aa33.16■■■□□ 2.9
PCNX2-216ENST00000496675 TDRD9Q8NDG6 1382 aaKnown RBP33.14■■■□□ 2.9
PCNX2-216ENST00000496675 POLA1P09884 1462 aaPredicted RBP33.13■■■□□ 2.89
PCNX2-216ENST00000496675 SNAPC4Q5SXM2 1469 aa33.12■■■□□ 2.89
PCNX2-216ENST00000496675 GAPVD1Q14C86 1478 aa33.09■■■□□ 2.89
PCNX2-216ENST00000496675 RAD54L2Q9Y4B4 1467 aa33.06■■■□□ 2.88
PCNX2-216ENST00000496675 ILDR1Q86SU0 546 aaPredicted RBP33.06■■■□□ 2.88
PCNX2-216ENST00000496675 SOGA1O94964 1423 aa33.02■■■□□ 2.88
PCNX2-216ENST00000496675 MAGI1Q96QZ7 1491 aaPredicted RBP32.98■■■□□ 2.87
PCNX2-216ENST00000496675 WDR97A6NE52 1622 aa32.91■■■□□ 2.86
PCNX2-216ENST00000496675 SYNJ2O15056 1496 aa32.89■■■□□ 2.86
PCNX2-216ENST00000496675 GRIN2BQ13224 1484 aa32.86■■■□□ 2.85
PCNX2-216ENST00000496675 FGD5Q6ZNL6 1462 aa32.74■■■□□ 2.83
PCNX2-216ENST00000496675 ERCC6L2Q5T890 1561 aa32.66■■■□□ 2.82
PCNX2-216ENST00000496675 KIF13AQ9H1H9 1805 aa32.65■■■□□ 2.82
PCNX2-216ENST00000496675 KDM4FA0A1W2PPD8 638 aa32.63■■■□□ 2.81
PCNX2-216ENST00000496675 PBRM1Q86U86 1689 aa32.57■■■□□ 2.8
PCNX2-216ENST00000496675 CEP170Q5SW79 1584 aa32.49■■■□□ 2.79
PCNX2-216ENST00000496675 FAM69CQ0P6D2 419 aa32.48■■■□□ 2.79
PCNX2-216ENST00000496675 CUX1P39880 1505 aa32.47■■■□□ 2.79
PCNX2-216ENST00000496675 GRIN2AQ12879 1464 aa32.42■■■□□ 2.78
PCNX2-216ENST00000496675 ABCC10Q5T3U5 1492 aa32.35■■■□□ 2.77
PCNX2-216ENST00000496675 NUP160Q12769 1436 aa32.34■■■□□ 2.77
PCNX2-216ENST00000496675 NPM1P06748 294 aaKnown RBP eCLIP32.32■■■□□ 2.76
PCNX2-216ENST00000496675 KDM6BO15054 1643 aa32.32■■■□□ 2.76
PCNX2-216ENST00000496675 SHROOM2Q13796 1616 aa32.32■■■□□ 2.76
PCNX2-216ENST00000496675 ABCA5Q8WWZ7 1642 aa32.32■■■□□ 2.76
PCNX2-216ENST00000496675 ABCA10Q8WWZ4 1543 aa32.29■■■□□ 2.76
PCNX2-216ENST00000496675 PRG4Q92954 1404 aaPredicted RBP32.2■■■□□ 2.75
PCNX2-216ENST00000496675 DIP2BQ9P265 1576 aa32.19■■■□□ 2.74
PCNX2-216ENST00000496675 ADAMTS12P58397 1594 aa32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms