RNA–Protein interactions for RNA: ENST00000496444.1

PQLC3-210, Transcript of PQ loop repeat containing 3, humanhuman

TSL 3

Gene PQLC3, Length 388 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PQLC3-210ENST00000496444 NISCHQ9Y2I1 1504 aa34.82■■■■□ 3.16
PQLC3-210ENST00000496444 CCDC180Q9P1Z9 1646 aa31.06■■■□□ 2.56
PQLC3-210ENST00000496444 ABCC9O60706 1549 aa30.3■■■□□ 2.44
PQLC3-210ENST00000496444 RB1CC1Q8TDY2 1594 aa29.21■■■□□ 2.27
PQLC3-210ENST00000496444 NACADO15069 1562 aa29.17■■■□□ 2.26
PQLC3-210ENST00000496444 ZCCHC6Q5VYS8 1495 aaKnown RBP29.01■■■□□ 2.23
PQLC3-210ENST00000496444 MYO15BQ96JP2 1530 aa29■■■□□ 2.23
PQLC3-210ENST00000496444 DCAF8L2P0C7V8 631 aa28.99■■■□□ 2.23
PQLC3-210ENST00000496444 DCAF1Q9Y4B6 1507 aa28.85■■■□□ 2.21
PQLC3-210ENST00000496444 UNC13AQ9UPW8 1703 aa28.59■■■□□ 2.17
PQLC3-210ENST00000496444 BICRAQ9NZM4 1560 aa28.31■■■□□ 2.12
PQLC3-210ENST00000496444 PABPN1Q86U42 306 aaKnown RBP eCLIP28.26■■■□□ 2.11
PQLC3-210ENST00000496444 SCRIBQ14160 1630 aa28.25■■■□□ 2.11
PQLC3-210ENST00000496444 SHROOM4Q9ULL8 1493 aa28.06■■■□□ 2.08
PQLC3-210ENST00000496444 DNAJC5BQ9UF47 199 aa27.81■■■□□ 2.04
PQLC3-210ENST00000496444 AEBP2Q6ZN18 517 aaPredicted RBP27.66■■■□□ 2.02
PQLC3-210ENST00000496444 EIF4G1Q04637 1599 aaKnown RBP27.56■■■□□ 2
PQLC3-210ENST00000496444 CC2D2AQ9P2K1 1620 aa27.46■■□□□ 1.99
PQLC3-210ENST00000496444 CECR2Q9BXF3 1484 aa27.25■■□□□ 1.95
PQLC3-210ENST00000496444 SMARCA4P51532 1647 aa27.05■■□□□ 1.92
PQLC3-210ENST00000496444 BAZ1AQ9NRL2 1556 aaPredicted RBP27.01■■□□□ 1.92
PQLC3-210ENST00000496444 CHIC1Q5VXU3 224 aa26.98■■□□□ 1.91
PQLC3-210ENST00000496444 NCAPD3P42695 1498 aa26.88■■□□□ 1.89
PQLC3-210ENST00000496444 ATAD2BQ9ULI0 1458 aa26.88■■□□□ 1.89
PQLC3-210ENST00000496444 SMARCA2P51531 1590 aa26.88■■□□□ 1.89
PQLC3-210ENST00000496444 MROH2BQ7Z745 1585 aa26.82■■□□□ 1.88
PQLC3-210ENST00000496444 PEG3Q9GZU2 1588 aa26.81■■□□□ 1.88
PQLC3-210ENST00000496444 HMGXB3Q12766 1538 aa26.78■■□□□ 1.88
PQLC3-210ENST00000496444 BAZ1BQ9UIG0 1483 aaKnown RBP26.66■■□□□ 1.86
PQLC3-210ENST00000496444 WIZO95785 1651 aa26.55■■□□□ 1.84
PQLC3-210ENST00000496444 RSF1Q96T23 1441 aaPredicted RBP26.48■■□□□ 1.83
PQLC3-210ENST00000496444 TOP2AP11388 1531 aaKnown RBP26.28■■□□□ 1.8
PQLC3-210ENST00000496444 LAMC3Q9Y6N6 1575 aa26.22■■□□□ 1.79
PQLC3-210ENST00000496444 NESP48681 1621 aa26.21■■□□□ 1.79
PQLC3-210ENST00000496444 ERCC6Q03468 1493 aa26.14■■□□□ 1.78
PQLC3-210ENST00000496444 CADPSQ9ULU8 1353 aa26.07■■□□□ 1.76
PQLC3-210ENST00000496444 PDS5BQ9NTI5 1447 aa25.99■■□□□ 1.75
PQLC3-210ENST00000496444 KIF21AQ7Z4S6 1674 aa25.97■■□□□ 1.75
PQLC3-210ENST00000496444 CFTRP13569 1480 aa25.93■■□□□ 1.74
PQLC3-210ENST00000496444 CCDC88BA6NC98 1476 aa25.92■■□□□ 1.74
PQLC3-210ENST00000496444 CUX2O14529 1486 aa25.91■■□□□ 1.74
PQLC3-210ENST00000496444 THOC2Q8NI27 1593 aaKnown RBP25.9■■□□□ 1.74
PQLC3-210ENST00000496444 PRDM2Q13029 1718 aa25.83■■□□□ 1.73
PQLC3-210ENST00000496444 FANCD2Q9BXW9 1451 aa25.79■■□□□ 1.72
PQLC3-210ENST00000496444 CEP164Q9UPV0 1460 aa25.77■■□□□ 1.72
PQLC3-210ENST00000496444 MRC2Q9UBG0 1479 aa25.74■■□□□ 1.71
PQLC3-210ENST00000496444 SUPT5HO00267 1087 aaKnown RBP25.7■■□□□ 1.7
PQLC3-210ENST00000496444 WDR62O43379 1518 aa25.68■■□□□ 1.7
PQLC3-210ENST00000496444 URB2Q14146 1524 aaKnown RBP25.53■■□□□ 1.68
PQLC3-210ENST00000496444 ABCC8Q09428 1581 aa25.4■■□□□ 1.66
PQLC3-210ENST00000496444 TOPBP1Q92547 1522 aa25.38■■□□□ 1.65
PQLC3-210ENST00000496444 DNMBPQ6XZF7 1577 aa25.37■■□□□ 1.65
PQLC3-210ENST00000496444 IFT140Q96RY7 1462 aa25.23■■□□□ 1.63
PQLC3-210ENST00000496444 CUX1P39880 1505 aa25.17■■□□□ 1.62
PQLC3-210ENST00000496444 POLA1P09884 1462 aaPredicted RBP25.15■■□□□ 1.62
PQLC3-210ENST00000496444 TARBP1Q13395 1621 aaKnown RBP25.13■■□□□ 1.61
PQLC3-210ENST00000496444 DNAJC5Q9H3Z4 198 aa25.11■■□□□ 1.61
PQLC3-210ENST00000496444 ZNF608Q9ULD9 1512 aaPredicted RBP25.09■■□□□ 1.61
PQLC3-210ENST00000496444 FGD5Q6ZNL6 1462 aa25.09■■□□□ 1.61
PQLC3-210ENST00000496444 EIF4G3O43432 1585 aaKnown RBP25.05■■□□□ 1.6
PQLC3-210ENST00000496444 SOGA1O94964 1423 aa25.03■■□□□ 1.6
PQLC3-210ENST00000496444 RAD54L2Q9Y4B4 1467 aa25.02■■□□□ 1.6
PQLC3-210ENST00000496444 BIVM-ERCC5R4GMW8 1640 aa24.99■■□□□ 1.59
PQLC3-210ENST00000496444 WRNQ14191 1432 aaPredicted RBP eCLIP24.98■■□□□ 1.59
PQLC3-210ENST00000496444 WDR97A6NE52 1622 aa24.97■■□□□ 1.59
PQLC3-210ENST00000496444 TOP2BQ02880 1626 aa24.97■■□□□ 1.59
PQLC3-210ENST00000496444 SYNJ1O43426 1573 aa24.94■■□□□ 1.58
PQLC3-210ENST00000496444 AQRO60306 1485 aaKnown RBP eCLIP24.93■■□□□ 1.58
PQLC3-210ENST00000496444 TDRD9Q8NDG6 1382 aaKnown RBP24.87■■□□□ 1.57
PQLC3-210ENST00000496444 ABCA10Q8WWZ4 1543 aa24.86■■□□□ 1.57
PQLC3-210ENST00000496444 ABCA5Q8WWZ7 1642 aa24.79■■□□□ 1.56
PQLC3-210ENST00000496444 OSCARQ8IYS5 282 aa24.78■■□□□ 1.56
PQLC3-210ENST00000496444 PBRM1Q86U86 1689 aa24.77■■□□□ 1.56
PQLC3-210ENST00000496444 GRIN2BQ13224 1484 aa24.77■■□□□ 1.56
PQLC3-210ENST00000496444 GAPVD1Q14C86 1478 aa24.76■■□□□ 1.55
PQLC3-210ENST00000496444 CHD1O14646 1710 aa24.75■■□□□ 1.55
PQLC3-210ENST00000496444 SNAPC4Q5SXM2 1469 aa24.73■■□□□ 1.55
PQLC3-210ENST00000496444 MAGI1Q96QZ7 1491 aaPredicted RBP24.73■■□□□ 1.55
PQLC3-210ENST00000496444 SYNJ2O15056 1496 aa24.62■■□□□ 1.53
PQLC3-210ENST00000496444 FBLN2P98095 1184 aa24.6■■□□□ 1.53
PQLC3-210ENST00000496444 ERICH3Q5RHP9 1530 aa24.58■■□□□ 1.53
PQLC3-210ENST00000496444 CHMP7Q8WUX9 453 aaPredicted RBP24.56■■□□□ 1.52
PQLC3-210ENST00000496444 ADAMTS12P58397 1594 aa24.54■■□□□ 1.52
PQLC3-210ENST00000496444 CLASP1Q7Z460 1538 aa24.47■■□□□ 1.51
PQLC3-210ENST00000496444 FHAD1B1AJZ9 1412 aa24.47■■□□□ 1.51
PQLC3-210ENST00000496444 KIF27Q86VH2 1401 aa24.46■■□□□ 1.51
PQLC3-210ENST00000496444 GRIN2AQ12879 1464 aa24.45■■□□□ 1.51
PQLC3-210ENST00000496444 RIMBP3CA6NJZ7 1639 aa24.44■■□□□ 1.5
PQLC3-210ENST00000496444 RIMBP3BA6NNM3 1639 aa24.44■■□□□ 1.5
PQLC3-210ENST00000496444 RIMBP3Q9UFD9 1639 aa24.44■■□□□ 1.5
PQLC3-210ENST00000496444 ARHGEF11O15085 1522 aa24.42■■□□□ 1.5
PQLC3-210ENST00000496444 CUL7Q14999 1698 aa24.37■■□□□ 1.49
PQLC3-210ENST00000496444 NUP160Q12769 1436 aa24.35■■□□□ 1.49
PQLC3-210ENST00000496444 CEP170Q5SW79 1584 aa24.34■■□□□ 1.49
PQLC3-210ENST00000496444 IGF1RP08069 1367 aa24.34■■□□□ 1.49
PQLC3-210ENST00000496444 TRIM41Q8WV44 630 aa24.31■■□□□ 1.48
PQLC3-210ENST00000496444 SHROOM2Q13796 1616 aa24.21■■□□□ 1.47
PQLC3-210ENST00000496444 ARAP1Q96P48 1450 aa24.21■■□□□ 1.47
PQLC3-210ENST00000496444 CARMIL1Q5VZK9 1371 aa24.2■■□□□ 1.46
PQLC3-210ENST00000496444 RUSC2Q8N2Y8 1516 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms