RNA–Protein interactions for RNA: ENST00000496330.5

FAM107B-228, Transcript of family with sequence similarity 107 member B, humanhuman

APPRIS P1 TSL 4 BASIC

Gene FAM107B, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM107B-228ENST00000496330 NISCHQ9Y2I1 1504 aa23.59■■□□□ 1.37
FAM107B-228ENST00000496330 ABCC9O60706 1549 aa21.41■■□□□ 1.02
FAM107B-228ENST00000496330 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
FAM107B-228ENST00000496330 RB1CC1Q8TDY2 1594 aa20.34■□□□□ 0.85
FAM107B-228ENST00000496330 DNAJC5BQ9UF47 199 aa20.16■□□□□ 0.82
FAM107B-228ENST00000496330 NACADO15069 1562 aa20.16■□□□□ 0.82
FAM107B-228ENST00000496330 DCAF8L2P0C7V8 631 aa19.95■□□□□ 0.78
FAM107B-228ENST00000496330 PABPN1Q86U42 306 aaKnown RBP eCLIP19.86■□□□□ 0.77
FAM107B-228ENST00000496330 MYO15BQ96JP2 1530 aa19.82■□□□□ 0.76
FAM107B-228ENST00000496330 UNC13AQ9UPW8 1703 aa19.82■□□□□ 0.76
FAM107B-228ENST00000496330 BICRAQ9NZM4 1560 aa19.7■□□□□ 0.74
FAM107B-228ENST00000496330 ZCCHC6Q5VYS8 1495 aaKnown RBP19.53■□□□□ 0.72
FAM107B-228ENST00000496330 SHROOM4Q9ULL8 1493 aa19.51■□□□□ 0.71
FAM107B-228ENST00000496330 DCAF1Q9Y4B6 1507 aa19.5■□□□□ 0.71
FAM107B-228ENST00000496330 SCRIBQ14160 1630 aa19.36■□□□□ 0.69
FAM107B-228ENST00000496330 CC2D2AQ9P2K1 1620 aa19.34■□□□□ 0.69
FAM107B-228ENST00000496330 CECR2Q9BXF3 1484 aa19.32■□□□□ 0.68
FAM107B-228ENST00000496330 EIF4G1Q04637 1599 aaKnown RBP19.26■□□□□ 0.67
FAM107B-228ENST00000496330 AEBP2Q6ZN18 517 aaPredicted RBP18.81■□□□□ 0.6
FAM107B-228ENST00000496330 DNAJC5Q9H3Z4 198 aa18.69■□□□□ 0.58
FAM107B-228ENST00000496330 NCAPD3P42695 1498 aa18.58■□□□□ 0.57
FAM107B-228ENST00000496330 CUX2O14529 1486 aa18.57■□□□□ 0.56
FAM107B-228ENST00000496330 ERCC6Q03468 1493 aa18.54■□□□□ 0.56
FAM107B-228ENST00000496330 ATAD2BQ9ULI0 1458 aa18.5■□□□□ 0.55
FAM107B-228ENST00000496330 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
FAM107B-228ENST00000496330 HMGXB3Q12766 1538 aa18.46■□□□□ 0.55
FAM107B-228ENST00000496330 SMARCA4P51532 1647 aa18.45■□□□□ 0.54
FAM107B-228ENST00000496330 BAZ1AQ9NRL2 1556 aaPredicted RBP18.35■□□□□ 0.53
FAM107B-228ENST00000496330 BAZ1BQ9UIG0 1483 aaKnown RBP18.33■□□□□ 0.53
FAM107B-228ENST00000496330 NESP48681 1621 aa18.32■□□□□ 0.52
FAM107B-228ENST00000496330 PEG3Q9GZU2 1588 aa18.28■□□□□ 0.52
FAM107B-228ENST00000496330 LAMC3Q9Y6N6 1575 aa18.22■□□□□ 0.51
FAM107B-228ENST00000496330 THOC2Q8NI27 1593 aaKnown RBP18.21■□□□□ 0.51
FAM107B-228ENST00000496330 MROH2BQ7Z745 1585 aa18.16■□□□□ 0.5
FAM107B-228ENST00000496330 PDS5BQ9NTI5 1447 aa18.12■□□□□ 0.49
FAM107B-228ENST00000496330 KIF21AQ7Z4S6 1674 aa18.1■□□□□ 0.49
FAM107B-228ENST00000496330 CADPSQ9ULU8 1353 aa18.01■□□□□ 0.47
FAM107B-228ENST00000496330 MRC2Q9UBG0 1479 aa17.97■□□□□ 0.47
FAM107B-228ENST00000496330 WIZO95785 1651 aa17.93■□□□□ 0.46
FAM107B-228ENST00000496330 WDR62O43379 1518 aa17.93■□□□□ 0.46
FAM107B-228ENST00000496330 CEP164Q9UPV0 1460 aa17.88■□□□□ 0.45
FAM107B-228ENST00000496330 FANCD2Q9BXW9 1451 aa17.82■□□□□ 0.44
FAM107B-228ENST00000496330 TRIM41Q8WV44 630 aa17.81■□□□□ 0.44
FAM107B-228ENST00000496330 CFTRP13569 1480 aa17.77■□□□□ 0.44
FAM107B-228ENST00000496330 TOP2AP11388 1531 aaKnown RBP17.73■□□□□ 0.43
FAM107B-228ENST00000496330 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
FAM107B-228ENST00000496330 CHIC1Q5VXU3 224 aa17.67■□□□□ 0.42
FAM107B-228ENST00000496330 URB2Q14146 1524 aaKnown RBP17.67■□□□□ 0.42
FAM107B-228ENST00000496330 OSCARQ8IYS5 282 aa17.65■□□□□ 0.42
FAM107B-228ENST00000496330 PRDM2Q13029 1718 aa17.6■□□□□ 0.41
FAM107B-228ENST00000496330 IFT140Q96RY7 1462 aa17.51■□□□□ 0.39
FAM107B-228ENST00000496330 CCDC88BA6NC98 1476 aa17.5■□□□□ 0.39
FAM107B-228ENST00000496330 ZNF608Q9ULD9 1512 aaPredicted RBP17.47■□□□□ 0.39
FAM107B-228ENST00000496330 TOPBP1Q92547 1522 aa17.46■□□□□ 0.39
FAM107B-228ENST00000496330 RIMBP3CA6NJZ7 1639 aa17.45■□□□□ 0.38
FAM107B-228ENST00000496330 RIMBP3BA6NNM3 1639 aa17.45■□□□□ 0.38
FAM107B-228ENST00000496330 RIMBP3Q9UFD9 1639 aa17.45■□□□□ 0.38
FAM107B-228ENST00000496330 ABCC8Q09428 1581 aa17.44■□□□□ 0.38
FAM107B-228ENST00000496330 EIF4G3O43432 1585 aaKnown RBP17.4■□□□□ 0.38
FAM107B-228ENST00000496330 DNMBPQ6XZF7 1577 aa17.4■□□□□ 0.38
FAM107B-228ENST00000496330 ARHGEF11O15085 1522 aa17.39■□□□□ 0.37
FAM107B-228ENST00000496330 TARBP1Q13395 1621 aaKnown RBP17.31■□□□□ 0.36
FAM107B-228ENST00000496330 CHD1O14646 1710 aa17.28■□□□□ 0.36
FAM107B-228ENST00000496330 AQRO60306 1485 aaKnown RBP eCLIP17.28■□□□□ 0.366e-7■□□□□ 11.3
FAM107B-228ENST00000496330 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
FAM107B-228ENST00000496330 CYB5RLQ6IPT4 315 aa17.23■□□□□ 0.35
FAM107B-228ENST00000496330 FBLN2P98095 1184 aa17.22■□□□□ 0.35
FAM107B-228ENST00000496330 ARAP1Q96P48 1450 aa17.19■□□□□ 0.34
FAM107B-228ENST00000496330 RAD54L2Q9Y4B4 1467 aa17.18■□□□□ 0.34
FAM107B-228ENST00000496330 SOGA1O94964 1423 aa17.18■□□□□ 0.34
FAM107B-228ENST00000496330 WDR97A6NE52 1622 aa17.18■□□□□ 0.34
FAM107B-228ENST00000496330 TDRD9Q8NDG6 1382 aaKnown RBP17.15■□□□□ 0.34
FAM107B-228ENST00000496330 SNAPC4Q5SXM2 1469 aa17.13■□□□□ 0.33
FAM107B-228ENST00000496330 FGD5Q6ZNL6 1462 aa17.13■□□□□ 0.33
FAM107B-228ENST00000496330 TRHP20396 242 aaPredicted RBP17.12■□□□□ 0.33
FAM107B-228ENST00000496330 MAGI1Q96QZ7 1491 aaPredicted RBP17.1■□□□□ 0.33
FAM107B-228ENST00000496330 CLASP1Q7Z460 1538 aa17.09■□□□□ 0.33
FAM107B-228ENST00000496330 SYNJ1O43426 1573 aa17.09■□□□□ 0.33
FAM107B-228ENST00000496330 CUX1P39880 1505 aa17.08■□□□□ 0.32
FAM107B-228ENST00000496330 GRIN2BQ13224 1484 aa17.07■□□□□ 0.32
FAM107B-228ENST00000496330 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
FAM107B-228ENST00000496330 SYNJ2O15056 1496 aa17.04■□□□□ 0.32
FAM107B-228ENST00000496330 PBRM1Q86U86 1689 aa16.99■□□□□ 0.31
FAM107B-228ENST00000496330 GAPVD1Q14C86 1478 aa16.98■□□□□ 0.31
FAM107B-228ENST00000496330 ABCA10Q8WWZ4 1543 aa16.94■□□□□ 0.3
FAM107B-228ENST00000496330 ABCA5Q8WWZ7 1642 aa16.93■□□□□ 0.3
FAM107B-228ENST00000496330 GRIN2AQ12879 1464 aa16.85■□□□□ 0.29
FAM107B-228ENST00000496330 WRNQ14191 1432 aaPredicted RBP eCLIP16.84■□□□□ 0.29
FAM107B-228ENST00000496330 ADAMTS12P58397 1594 aa16.82■□□□□ 0.28
FAM107B-228ENST00000496330 SUPT5HO00267 1087 aaKnown RBP16.79■□□□□ 0.28
FAM107B-228ENST00000496330 NUP160Q12769 1436 aa16.79■□□□□ 0.28
FAM107B-228ENST00000496330 BIVM-ERCC5R4GMW8 1640 aa16.78■□□□□ 0.28
FAM107B-228ENST00000496330 CEP170Q5SW79 1584 aa16.78■□□□□ 0.28
FAM107B-228ENST00000496330 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
FAM107B-228ENST00000496330 ERCC6L2Q5T890 1561 aa16.77■□□□□ 0.28
FAM107B-228ENST00000496330 FHAD1B1AJZ9 1412 aa16.76■□□□□ 0.27
FAM107B-228ENST00000496330 SHROOM2Q13796 1616 aa16.74■□□□□ 0.27
FAM107B-228ENST00000496330 ERICH3Q5RHP9 1530 aa16.74■□□□□ 0.27
FAM107B-228ENST00000496330 PRG4Q92954 1404 aaPredicted RBP16.64■□□□□ 0.25
FAM107B-228ENST00000496330 RUSC2Q8N2Y8 1516 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms