RNA–Protein interactions for RNA: ENST00000496318.5

HLA-DQA1-207, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-207ENST00000496318 NISCHQ9Y2I1 1504 aa28.9■■■□□ 2.22
HLA-DQA1-207ENST00000496318 CCDC180Q9P1Z9 1646 aa25.87■■□□□ 1.73
HLA-DQA1-207ENST00000496318 ABCC9O60706 1549 aa25.67■■□□□ 1.7
HLA-DQA1-207ENST00000496318 RB1CC1Q8TDY2 1594 aa24.44■■□□□ 1.5
HLA-DQA1-207ENST00000496318 DCAF8L2P0C7V8 631 aa24.3■■□□□ 1.48
HLA-DQA1-207ENST00000496318 NACADO15069 1562 aa24.29■■□□□ 1.48
HLA-DQA1-207ENST00000496318 UNC13AQ9UPW8 1703 aa24.19■■□□□ 1.46
HLA-DQA1-207ENST00000496318 ZCCHC6Q5VYS8 1495 aaKnown RBP24.04■■□□□ 1.44
HLA-DQA1-207ENST00000496318 MYO15BQ96JP2 1530 aa23.94■■□□□ 1.42
HLA-DQA1-207ENST00000496318 PABPN1Q86U42 306 aaKnown RBP eCLIP23.9■■□□□ 1.42
HLA-DQA1-207ENST00000496318 BICRAQ9NZM4 1560 aa23.84■■□□□ 1.41
HLA-DQA1-207ENST00000496318 DNAJC5BQ9UF47 199 aa23.81■■□□□ 1.4
HLA-DQA1-207ENST00000496318 DCAF1Q9Y4B6 1507 aa23.78■■□□□ 1.4
HLA-DQA1-207ENST00000496318 SCRIBQ14160 1630 aa23.73■■□□□ 1.39
HLA-DQA1-207ENST00000496318 SHROOM4Q9ULL8 1493 aa23.26■■□□□ 1.31
HLA-DQA1-207ENST00000496318 CC2D2AQ9P2K1 1620 aa23.21■■□□□ 1.31
HLA-DQA1-207ENST00000496318 EIF4G1Q04637 1599 aaKnown RBP23.18■■□□□ 1.3
HLA-DQA1-207ENST00000496318 CECR2Q9BXF3 1484 aa23■■□□□ 1.27
HLA-DQA1-207ENST00000496318 SMARCA4P51532 1647 aa22.58■■□□□ 1.21
HLA-DQA1-207ENST00000496318 ATAD2BQ9ULI0 1458 aa22.43■■□□□ 1.18
HLA-DQA1-207ENST00000496318 BAZ1AQ9NRL2 1556 aaPredicted RBP22.4■■□□□ 1.18
HLA-DQA1-207ENST00000496318 NCAPD3P42695 1498 aa22.38■■□□□ 1.17
HLA-DQA1-207ENST00000496318 MROH2BQ7Z745 1585 aa22.37■■□□□ 1.17
HLA-DQA1-207ENST00000496318 SMARCA2P51531 1590 aa22.36■■□□□ 1.17
HLA-DQA1-207ENST00000496318 HMGXB3Q12766 1538 aa22.31■■□□□ 1.16
HLA-DQA1-207ENST00000496318 BAZ1BQ9UIG0 1483 aaKnown RBP22.25■■□□□ 1.15
HLA-DQA1-207ENST00000496318 PEG3Q9GZU2 1588 aa22.25■■□□□ 1.15
HLA-DQA1-207ENST00000496318 WIZO95785 1651 aa22.19■■□□□ 1.14
HLA-DQA1-207ENST00000496318 NESP48681 1621 aa22.17■■□□□ 1.14
HLA-DQA1-207ENST00000496318 ERCC6Q03468 1493 aa22.06■■□□□ 1.12
HLA-DQA1-207ENST00000496318 KIF21AQ7Z4S6 1674 aa21.98■■□□□ 1.11
HLA-DQA1-207ENST00000496318 RSF1Q96T23 1441 aaPredicted RBP21.91■■□□□ 1.1
HLA-DQA1-207ENST00000496318 LAMC3Q9Y6N6 1575 aa21.91■■□□□ 1.1
HLA-DQA1-207ENST00000496318 THOC2Q8NI27 1593 aaKnown RBP21.89■■□□□ 1.09
HLA-DQA1-207ENST00000496318 CUX2O14529 1486 aa21.84■■□□□ 1.09
HLA-DQA1-207ENST00000496318 TOP2AP11388 1531 aaKnown RBP21.8■■□□□ 1.08
HLA-DQA1-207ENST00000496318 CADPSQ9ULU8 1353 aa21.72■■□□□ 1.07
HLA-DQA1-207ENST00000496318 PDS5BQ9NTI5 1447 aa21.68■■□□□ 1.06
HLA-DQA1-207ENST00000496318 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
HLA-DQA1-207ENST00000496318 PRDM2Q13029 1718 aa21.61■■□□□ 1.05
HLA-DQA1-207ENST00000496318 MRC2Q9UBG0 1479 aa21.58■■□□□ 1.05
HLA-DQA1-207ENST00000496318 CFTRP13569 1480 aa21.56■■□□□ 1.04
HLA-DQA1-207ENST00000496318 FANCD2Q9BXW9 1451 aa21.56■■□□□ 1.04
HLA-DQA1-207ENST00000496318 CEP164Q9UPV0 1460 aa21.56■■□□□ 1.04
HLA-DQA1-207ENST00000496318 WDR62O43379 1518 aa21.55■■□□□ 1.04
HLA-DQA1-207ENST00000496318 CCDC88BA6NC98 1476 aa21.54■■□□□ 1.04
HLA-DQA1-207ENST00000496318 AEBP2Q6ZN18 517 aaPredicted RBP21.5■■□□□ 1.03
HLA-DQA1-207ENST00000496318 DNAJC5Q9H3Z4 198 aa21.5■■□□□ 1.03
HLA-DQA1-207ENST00000496318 URB2Q14146 1524 aaKnown RBP21.44■■□□□ 1.02
HLA-DQA1-207ENST00000496318 TOPBP1Q92547 1522 aa21.21■□□□□ 0.99
HLA-DQA1-207ENST00000496318 SUPT5HO00267 1087 aaKnown RBP21.19■□□□□ 0.98
HLA-DQA1-207ENST00000496318 DNMBPQ6XZF7 1577 aa21.16■□□□□ 0.98
HLA-DQA1-207ENST00000496318 ZNF608Q9ULD9 1512 aaPredicted RBP21.14■□□□□ 0.98
HLA-DQA1-207ENST00000496318 EIF4G3O43432 1585 aaKnown RBP21.08■□□□□ 0.97
HLA-DQA1-207ENST00000496318 TARBP1Q13395 1621 aaKnown RBP21.06■□□□□ 0.96
HLA-DQA1-207ENST00000496318 IFT140Q96RY7 1462 aa21.06■□□□□ 0.96
HLA-DQA1-207ENST00000496318 POLA1P09884 1462 aaPredicted RBP21.01■□□□□ 0.95
HLA-DQA1-207ENST00000496318 ABCC8Q09428 1581 aa21■□□□□ 0.95
HLA-DQA1-207ENST00000496318 CUX1P39880 1505 aa20.99■□□□□ 0.95
HLA-DQA1-207ENST00000496318 RAD54L2Q9Y4B4 1467 aa20.98■□□□□ 0.95
HLA-DQA1-207ENST00000496318 CHD1O14646 1710 aa20.97■□□□□ 0.95
HLA-DQA1-207ENST00000496318 AQRO60306 1485 aaKnown RBP eCLIP20.94■□□□□ 0.94
HLA-DQA1-207ENST00000496318 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
HLA-DQA1-207ENST00000496318 WDR97A6NE52 1622 aa20.89■□□□□ 0.93
HLA-DQA1-207ENST00000496318 SOGA1O94964 1423 aa20.85■□□□□ 0.93
HLA-DQA1-207ENST00000496318 OSCARQ8IYS5 282 aa20.84■□□□□ 0.93
HLA-DQA1-207ENST00000496318 TDRD9Q8NDG6 1382 aaKnown RBP20.84■□□□□ 0.93
HLA-DQA1-207ENST00000496318 TRIM41Q8WV44 630 aa20.83■□□□□ 0.93
HLA-DQA1-207ENST00000496318 PBRM1Q86U86 1689 aa20.8■□□□□ 0.92
HLA-DQA1-207ENST00000496318 RIMBP3CA6NJZ7 1639 aa20.78■□□□□ 0.92
HLA-DQA1-207ENST00000496318 RIMBP3BA6NNM3 1639 aa20.78■□□□□ 0.92
HLA-DQA1-207ENST00000496318 RIMBP3Q9UFD9 1639 aa20.78■□□□□ 0.92
HLA-DQA1-207ENST00000496318 SYNJ1O43426 1573 aa20.77■□□□□ 0.92
HLA-DQA1-207ENST00000496318 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
HLA-DQA1-207ENST00000496318 BIVM-ERCC5R4GMW8 1640 aa20.75■□□□□ 0.91
HLA-DQA1-207ENST00000496318 FBLN2P98095 1184 aa20.71■□□□□ 0.91
HLA-DQA1-207ENST00000496318 ABCA5Q8WWZ7 1642 aa20.7■□□□□ 0.9
HLA-DQA1-207ENST00000496318 TOP2BQ02880 1626 aa20.69■□□□□ 0.9
HLA-DQA1-207ENST00000496318 ARHGEF11O15085 1522 aa20.68■□□□□ 0.9
HLA-DQA1-207ENST00000496318 ABCA10Q8WWZ4 1543 aa20.64■□□□□ 0.9
HLA-DQA1-207ENST00000496318 WRNQ14191 1432 aaPredicted RBP eCLIP20.64■□□□□ 0.89
HLA-DQA1-207ENST00000496318 GRIN2BQ13224 1484 aa20.63■□□□□ 0.89
HLA-DQA1-207ENST00000496318 GAPVD1Q14C86 1478 aa20.63■□□□□ 0.89
HLA-DQA1-207ENST00000496318 MAGI1Q96QZ7 1491 aaPredicted RBP20.6■□□□□ 0.89
HLA-DQA1-207ENST00000496318 CLASP1Q7Z460 1538 aa20.57■□□□□ 0.88
HLA-DQA1-207ENST00000496318 SYNJ2O15056 1496 aa20.54■□□□□ 0.88
HLA-DQA1-207ENST00000496318 ADAMTS12P58397 1594 aa20.53■□□□□ 0.88
HLA-DQA1-207ENST00000496318 ARAP1Q96P48 1450 aa20.51■□□□□ 0.87
HLA-DQA1-207ENST00000496318 CHMP7Q8WUX9 453 aaPredicted RBP20.51■□□□□ 0.87
HLA-DQA1-207ENST00000496318 CEP170Q5SW79 1584 aa20.43■□□□□ 0.86
HLA-DQA1-207ENST00000496318 CYB5RLQ6IPT4 315 aa20.43■□□□□ 0.86
HLA-DQA1-207ENST00000496318 GRIN2AQ12879 1464 aa20.42■□□□□ 0.86
HLA-DQA1-207ENST00000496318 ERCC6L2Q5T890 1561 aa20.4■□□□□ 0.86
HLA-DQA1-207ENST00000496318 ERICH3Q5RHP9 1530 aa20.37■□□□□ 0.85
HLA-DQA1-207ENST00000496318 FHAD1B1AJZ9 1412 aa20.33■□□□□ 0.84
HLA-DQA1-207ENST00000496318 NUP160Q12769 1436 aa20.3■□□□□ 0.84
HLA-DQA1-207ENST00000496318 SHROOM2Q13796 1616 aa20.27■□□□□ 0.84
HLA-DQA1-207ENST00000496318 RUSC2Q8N2Y8 1516 aa20.24■□□□□ 0.83
HLA-DQA1-207ENST00000496318 CUL7Q14999 1698 aa20.2■□□□□ 0.82
HLA-DQA1-207ENST00000496318 KIF27Q86VH2 1401 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms