RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 NISCHQ9Y2I1 1504 aa30.42■■■□□ 2.46
TRIM59-207ENST00000496222 CCDC180Q9P1Z9 1646 aa27.09■■□□□ 1.93
TRIM59-207ENST00000496222 ABCC9O60706 1549 aa26.65■■□□□ 1.86
TRIM59-207ENST00000496222 RB1CC1Q8TDY2 1594 aa25.56■■□□□ 1.68
TRIM59-207ENST00000496222 NACADO15069 1562 aa25.51■■□□□ 1.67
TRIM59-207ENST00000496222 DCAF8L2P0C7V8 631 aa25.38■■□□□ 1.65
TRIM59-207ENST00000496222 MYO15BQ96JP2 1530 aa25.35■■□□□ 1.65
TRIM59-207ENST00000496222 ZCCHC6Q5VYS8 1495 aaKnown RBP25.31■■□□□ 1.64
TRIM59-207ENST00000496222 DCAF1Q9Y4B6 1507 aa25.17■■□□□ 1.62
TRIM59-207ENST00000496222 UNC13AQ9UPW8 1703 aa25.04■■□□□ 1.6
TRIM59-207ENST00000496222 PABPN1Q86U42 306 aaKnown RBP eCLIP24.89■■□□□ 1.58
TRIM59-207ENST00000496222 BICRAQ9NZM4 1560 aa24.88■■□□□ 1.57
TRIM59-207ENST00000496222 DNAJC5BQ9UF47 199 aa24.72■■□□□ 1.55
TRIM59-207ENST00000496222 SCRIBQ14160 1630 aa24.69■■□□□ 1.54
TRIM59-207ENST00000496222 SHROOM4Q9ULL8 1493 aa24.53■■□□□ 1.52
TRIM59-207ENST00000496222 EIF4G1Q04637 1599 aaKnown RBP24.18■■□□□ 1.46
TRIM59-207ENST00000496222 CC2D2AQ9P2K1 1620 aa24.13■■□□□ 1.45
TRIM59-207ENST00000496222 CECR2Q9BXF3 1484 aa23.97■■□□□ 1.43
TRIM59-207ENST00000496222 SMARCA4P51532 1647 aa23.62■■□□□ 1.37
TRIM59-207ENST00000496222 NCAPD3P42695 1498 aa23.58■■□□□ 1.37
TRIM59-207ENST00000496222 ATAD2BQ9ULI0 1458 aa23.56■■□□□ 1.36
TRIM59-207ENST00000496222 BAZ1AQ9NRL2 1556 aaPredicted RBP23.55■■□□□ 1.36
TRIM59-207ENST00000496222 SMARCA2P51531 1590 aa23.48■■□□□ 1.35
TRIM59-207ENST00000496222 MROH2BQ7Z745 1585 aa23.46■■□□□ 1.35
TRIM59-207ENST00000496222 PEG3Q9GZU2 1588 aa23.44■■□□□ 1.34
TRIM59-207ENST00000496222 HMGXB3Q12766 1538 aa23.42■■□□□ 1.34
TRIM59-207ENST00000496222 BAZ1BQ9UIG0 1483 aaKnown RBP23.3■■□□□ 1.32
TRIM59-207ENST00000496222 WIZO95785 1651 aa23.18■■□□□ 1.3
TRIM59-207ENST00000496222 RSF1Q96T23 1441 aaPredicted RBP23.13■■□□□ 1.29
TRIM59-207ENST00000496222 NESP48681 1621 aa23.06■■□□□ 1.28
TRIM59-207ENST00000496222 LAMC3Q9Y6N6 1575 aa22.94■■□□□ 1.26
TRIM59-207ENST00000496222 ERCC6Q03468 1493 aa22.92■■□□□ 1.26
TRIM59-207ENST00000496222 TOP2AP11388 1531 aaKnown RBP22.9■■□□□ 1.26
TRIM59-207ENST00000496222 CADPSQ9ULU8 1353 aa22.86■■□□□ 1.25
TRIM59-207ENST00000496222 CUX2O14529 1486 aa22.8■■□□□ 1.24
TRIM59-207ENST00000496222 PDS5BQ9NTI5 1447 aa22.77■■□□□ 1.24
TRIM59-207ENST00000496222 KIF21AQ7Z4S6 1674 aa22.76■■□□□ 1.23
TRIM59-207ENST00000496222 THOC2Q8NI27 1593 aaKnown RBP22.74■■□□□ 1.23
TRIM59-207ENST00000496222 CFTRP13569 1480 aa22.71■■□□□ 1.23
TRIM59-207ENST00000496222 CCDC88BA6NC98 1476 aa22.66■■□□□ 1.22
TRIM59-207ENST00000496222 FANCD2Q9BXW9 1451 aa22.58■■□□□ 1.2
TRIM59-207ENST00000496222 MRC2Q9UBG0 1479 aa22.56■■□□□ 1.2
TRIM59-207ENST00000496222 CEP164Q9UPV0 1460 aa22.54■■□□□ 1.2
TRIM59-207ENST00000496222 WDR62O43379 1518 aa22.52■■□□□ 1.19
TRIM59-207ENST00000496222 PRDM2Q13029 1718 aa22.48■■□□□ 1.19
TRIM59-207ENST00000496222 URB2Q14146 1524 aaKnown RBP22.41■■□□□ 1.18
TRIM59-207ENST00000496222 DNAJC5Q9H3Z4 198 aa22.34■■□□□ 1.17
TRIM59-207ENST00000496222 SUPT5HO00267 1087 aaKnown RBP22.33■■□□□ 1.17
TRIM59-207ENST00000496222 AEBP2Q6ZN18 517 aaPredicted RBP22.22■■□□□ 1.15
TRIM59-207ENST00000496222 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
TRIM59-207ENST00000496222 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
TRIM59-207ENST00000496222 DNMBPQ6XZF7 1577 aa22.16■■□□□ 1.14
TRIM59-207ENST00000496222 IFT140Q96RY7 1462 aa22.09■■□□□ 1.13
TRIM59-207ENST00000496222 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
TRIM59-207ENST00000496222 POLA1P09884 1462 aaPredicted RBP22.02■■□□□ 1.12
TRIM59-207ENST00000496222 TARBP1Q13395 1621 aaKnown RBP22.02■■□□□ 1.11
TRIM59-207ENST00000496222 CUX1P39880 1505 aa22.01■■□□□ 1.11
TRIM59-207ENST00000496222 FGD5Q6ZNL6 1462 aa21.93■■□□□ 1.1
TRIM59-207ENST00000496222 RAD54L2Q9Y4B4 1467 aa21.93■■□□□ 1.1
TRIM59-207ENST00000496222 EIF4G3O43432 1585 aaKnown RBP21.92■■□□□ 1.1
TRIM59-207ENST00000496222 SOGA1O94964 1423 aa21.9■■□□□ 1.1
TRIM59-207ENST00000496222 AQRO60306 1485 aaKnown RBP eCLIP21.9■■□□□ 1.18e-7■■■■■ 28.7
TRIM59-207ENST00000496222 OSCARQ8IYS5 282 aa21.82■■□□□ 1.08
TRIM59-207ENST00000496222 TDRD9Q8NDG6 1382 aaKnown RBP21.81■■□□□ 1.08
TRIM59-207ENST00000496222 WDR97A6NE52 1622 aa21.78■■□□□ 1.08
TRIM59-207ENST00000496222 SYNJ1O43426 1573 aa21.76■■□□□ 1.07
TRIM59-207ENST00000496222 WRNQ14191 1432 aaPredicted RBP eCLIP21.76■■□□□ 1.07
TRIM59-207ENST00000496222 TOP2BQ02880 1626 aa21.76■■□□□ 1.07
TRIM59-207ENST00000496222 BIVM-ERCC5R4GMW8 1640 aa21.76■■□□□ 1.07
TRIM59-207ENST00000496222 ABCA10Q8WWZ4 1543 aa21.73■■□□□ 1.07
TRIM59-207ENST00000496222 CHD1O14646 1710 aa21.68■■□□□ 1.06
TRIM59-207ENST00000496222 GRIN2BQ13224 1484 aa21.66■■□□□ 1.06
TRIM59-207ENST00000496222 SNAPC4Q5SXM2 1469 aa21.66■■□□□ 1.06
TRIM59-207ENST00000496222 ABCA5Q8WWZ7 1642 aa21.66■■□□□ 1.06
TRIM59-207ENST00000496222 GAPVD1Q14C86 1478 aa21.65■■□□□ 1.06
TRIM59-207ENST00000496222 MAGI1Q96QZ7 1491 aaPredicted RBP21.63■■□□□ 1.05
TRIM59-207ENST00000496222 PBRM1Q86U86 1689 aa21.6■■□□□ 1.05
TRIM59-207ENST00000496222 FBLN2P98095 1184 aa21.57■■□□□ 1.04
TRIM59-207ENST00000496222 SYNJ2O15056 1496 aa21.55■■□□□ 1.04
TRIM59-207ENST00000496222 RIMBP3CA6NJZ7 1639 aa21.51■■□□□ 1.03
TRIM59-207ENST00000496222 RIMBP3BA6NNM3 1639 aa21.51■■□□□ 1.03
TRIM59-207ENST00000496222 RIMBP3Q9UFD9 1639 aa21.51■■□□□ 1.03
TRIM59-207ENST00000496222 CHMP7Q8WUX9 453 aaPredicted RBP21.51■■□□□ 1.03
TRIM59-207ENST00000496222 ARHGEF11O15085 1522 aa21.49■■□□□ 1.03
TRIM59-207ENST00000496222 CLASP1Q7Z460 1538 aa21.48■■□□□ 1.03
TRIM59-207ENST00000496222 ERICH3Q5RHP9 1530 aa21.45■■□□□ 1.02
TRIM59-207ENST00000496222 ADAMTS12P58397 1594 aa21.44■■□□□ 1.02
TRIM59-207ENST00000496222 TRIM41Q8WV44 630 aa21.44■■□□□ 1.02
TRIM59-207ENST00000496222 GRIN2AQ12879 1464 aa21.39■■□□□ 1.02
TRIM59-207ENST00000496222 FHAD1B1AJZ9 1412 aa21.39■■□□□ 1.02
TRIM59-207ENST00000496222 CHIC1Q5VXU3 224 aa21.35■■□□□ 1.01
TRIM59-207ENST00000496222 NUP160Q12769 1436 aa21.34■■□□□ 1.01
TRIM59-207ENST00000496222 ARAP1Q96P48 1450 aa21.32■■□□□ 1
TRIM59-207ENST00000496222 CEP170Q5SW79 1584 aa21.31■■□□□ 1
TRIM59-207ENST00000496222 IGF1RP08069 1367 aa21.31■■□□□ 1
TRIM59-207ENST00000496222 KIF27Q86VH2 1401 aa21.29■■□□□ 1
TRIM59-207ENST00000496222 CYB5RLQ6IPT4 315 aa21.27■■□□□ 1
TRIM59-207ENST00000496222 SHROOM2Q13796 1616 aa21.2■□□□□ 0.98
TRIM59-207ENST00000496222 CUL7Q14999 1698 aa21.19■□□□□ 0.98
TRIM59-207ENST00000496222 ERCC6L2Q5T890 1561 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms