RNA–Protein interactions for RNA: ENST00000495998.1

SMO-204, Transcript of smoothened, frizzled class receptor, humanhuman

TSL 3

Gene SMO, Length 732 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMO-204ENST00000495998 NISCHQ9Y2I1 1504 aa32.16■■■□□ 2.74
SMO-204ENST00000495998 CCDC180Q9P1Z9 1646 aa28.58■■■□□ 2.17
SMO-204ENST00000495998 ABCC9O60706 1549 aa27.91■■■□□ 2.06
SMO-204ENST00000495998 NACADO15069 1562 aa26.88■■□□□ 1.89
SMO-204ENST00000495998 RB1CC1Q8TDY2 1594 aa26.88■■□□□ 1.89
SMO-204ENST00000495998 ZCCHC6Q5VYS8 1495 aaKnown RBP26.81■■□□□ 1.88
SMO-204ENST00000495998 DCAF8L2P0C7V8 631 aa26.77■■□□□ 1.88
SMO-204ENST00000495998 MYO15BQ96JP2 1530 aa26.76■■□□□ 1.87
SMO-204ENST00000495998 DCAF1Q9Y4B6 1507 aa26.65■■□□□ 1.86
SMO-204ENST00000495998 UNC13AQ9UPW8 1703 aa26.27■■□□□ 1.8
SMO-204ENST00000495998 BICRAQ9NZM4 1560 aa26.1■■□□□ 1.77
SMO-204ENST00000495998 PABPN1Q86U42 306 aaKnown RBP eCLIP26.08■■□□□ 1.77
SMO-204ENST00000495998 SCRIBQ14160 1630 aa26.04■■□□□ 1.76
SMO-204ENST00000495998 SHROOM4Q9ULL8 1493 aa25.84■■□□□ 1.73
SMO-204ENST00000495998 DNAJC5BQ9UF47 199 aa25.64■■□□□ 1.7
SMO-204ENST00000495998 EIF4G1Q04637 1599 aaKnown RBP25.39■■□□□ 1.65
SMO-204ENST00000495998 CC2D2AQ9P2K1 1620 aa25.27■■□□□ 1.64
SMO-204ENST00000495998 CECR2Q9BXF3 1484 aa25.09■■□□□ 1.61
SMO-204ENST00000495998 SMARCA4P51532 1647 aa24.94■■□□□ 1.58
SMO-204ENST00000495998 BAZ1AQ9NRL2 1556 aaPredicted RBP24.92■■□□□ 1.58
SMO-204ENST00000495998 NCAPD3P42695 1498 aa24.82■■□□□ 1.56
SMO-204ENST00000495998 ATAD2BQ9ULI0 1458 aa24.82■■□□□ 1.56
SMO-204ENST00000495998 SMARCA2P51531 1590 aa24.78■■□□□ 1.56
SMO-204ENST00000495998 MROH2BQ7Z745 1585 aa24.78■■□□□ 1.56
SMO-204ENST00000495998 PEG3Q9GZU2 1588 aa24.74■■□□□ 1.55
SMO-204ENST00000495998 HMGXB3Q12766 1538 aa24.69■■□□□ 1.54
SMO-204ENST00000495998 BAZ1BQ9UIG0 1483 aaKnown RBP24.58■■□□□ 1.53
SMO-204ENST00000495998 RSF1Q96T23 1441 aaPredicted RBP24.52■■□□□ 1.52
SMO-204ENST00000495998 WIZO95785 1651 aa24.5■■□□□ 1.51
SMO-204ENST00000495998 TOP2AP11388 1531 aaKnown RBP24.25■■□□□ 1.47
SMO-204ENST00000495998 NESP48681 1621 aa24.17■■□□□ 1.46
SMO-204ENST00000495998 LAMC3Q9Y6N6 1575 aa24.13■■□□□ 1.45
SMO-204ENST00000495998 CADPSQ9ULU8 1353 aa24.07■■□□□ 1.44
SMO-204ENST00000495998 ERCC6Q03468 1493 aa24.04■■□□□ 1.44
SMO-204ENST00000495998 CCDC88BA6NC98 1476 aa23.97■■□□□ 1.43
SMO-204ENST00000495998 PDS5BQ9NTI5 1447 aa23.96■■□□□ 1.43
SMO-204ENST00000495998 CFTRP13569 1480 aa23.95■■□□□ 1.42
SMO-204ENST00000495998 KIF21AQ7Z4S6 1674 aa23.88■■□□□ 1.41
SMO-204ENST00000495998 CUX2O14529 1486 aa23.83■■□□□ 1.41
SMO-204ENST00000495998 SUPT5HO00267 1087 aaKnown RBP23.83■■□□□ 1.41
SMO-204ENST00000495998 THOC2Q8NI27 1593 aaKnown RBP23.82■■□□□ 1.4
SMO-204ENST00000495998 FANCD2Q9BXW9 1451 aa23.78■■□□□ 1.4
SMO-204ENST00000495998 CEP164Q9UPV0 1460 aa23.75■■□□□ 1.39
SMO-204ENST00000495998 PRDM2Q13029 1718 aa23.74■■□□□ 1.39
SMO-204ENST00000495998 MRC2Q9UBG0 1479 aa23.72■■□□□ 1.39
SMO-204ENST00000495998 WDR62O43379 1518 aa23.65■■□□□ 1.38
SMO-204ENST00000495998 URB2Q14146 1524 aaKnown RBP23.55■■□□□ 1.36
SMO-204ENST00000495998 ABCC8Q09428 1581 aa23.41■■□□□ 1.34
SMO-204ENST00000495998 TOPBP1Q92547 1522 aa23.41■■□□□ 1.34
SMO-204ENST00000495998 DNMBPQ6XZF7 1577 aa23.39■■□□□ 1.33
SMO-204ENST00000495998 IFT140Q96RY7 1462 aa23.26■■□□□ 1.31
SMO-204ENST00000495998 CUX1P39880 1505 aa23.25■■□□□ 1.31
SMO-204ENST00000495998 POLA1P09884 1462 aaPredicted RBP23.22■■□□□ 1.31
SMO-204ENST00000495998 TARBP1Q13395 1621 aaKnown RBP23.17■■□□□ 1.3
SMO-204ENST00000495998 FGD5Q6ZNL6 1462 aa23.15■■□□□ 1.3
SMO-204ENST00000495998 ZNF608Q9ULD9 1512 aaPredicted RBP23.14■■□□□ 1.3
SMO-204ENST00000495998 SOGA1O94964 1423 aa23.11■■□□□ 1.29
SMO-204ENST00000495998 RAD54L2Q9Y4B4 1467 aa23.11■■□□□ 1.29
SMO-204ENST00000495998 WRNQ14191 1432 aaPredicted RBP eCLIP23.09■■□□□ 1.29
SMO-204ENST00000495998 DNAJC5Q9H3Z4 198 aa23.07■■□□□ 1.28
SMO-204ENST00000495998 TOP2BQ02880 1626 aa23.05■■□□□ 1.28
SMO-204ENST00000495998 EIF4G3O43432 1585 aaKnown RBP23.05■■□□□ 1.28
SMO-204ENST00000495998 BIVM-ERCC5R4GMW8 1640 aa23.04■■□□□ 1.28
SMO-204ENST00000495998 SYNJ1O43426 1573 aa23.04■■□□□ 1.28
SMO-204ENST00000495998 AQRO60306 1485 aaKnown RBP eCLIP23.02■■□□□ 1.28
SMO-204ENST00000495998 WDR97A6NE52 1622 aa22.99■■□□□ 1.27
SMO-204ENST00000495998 TDRD9Q8NDG6 1382 aaKnown RBP22.97■■□□□ 1.27
SMO-204ENST00000495998 ABCA10Q8WWZ4 1543 aa22.95■■□□□ 1.26
SMO-204ENST00000495998 ABCA5Q8WWZ7 1642 aa22.86■■□□□ 1.25
SMO-204ENST00000495998 GRIN2BQ13224 1484 aa22.85■■□□□ 1.25
SMO-204ENST00000495998 GAPVD1Q14C86 1478 aa22.85■■□□□ 1.25
SMO-204ENST00000495998 OSCARQ8IYS5 282 aa22.82■■□□□ 1.24
SMO-204ENST00000495998 SNAPC4Q5SXM2 1469 aa22.79■■□□□ 1.24
SMO-204ENST00000495998 MAGI1Q96QZ7 1491 aaPredicted RBP22.79■■□□□ 1.24
SMO-204ENST00000495998 PBRM1Q86U86 1689 aa22.78■■□□□ 1.24
SMO-204ENST00000495998 CHD1O14646 1710 aa22.74■■□□□ 1.23
SMO-204ENST00000495998 SYNJ2O15056 1496 aa22.7■■□□□ 1.22
SMO-204ENST00000495998 FBLN2P98095 1184 aa22.68■■□□□ 1.22
SMO-204ENST00000495998 ERICH3Q5RHP9 1530 aa22.67■■□□□ 1.22
SMO-204ENST00000495998 CHMP7Q8WUX9 453 aaPredicted RBP22.65■■□□□ 1.22
SMO-204ENST00000495998 ADAMTS12P58397 1594 aa22.62■■□□□ 1.21
SMO-204ENST00000495998 KIF27Q86VH2 1401 aa22.6■■□□□ 1.21
SMO-204ENST00000495998 FHAD1B1AJZ9 1412 aa22.58■■□□□ 1.21
SMO-204ENST00000495998 GRIN2AQ12879 1464 aa22.55■■□□□ 1.2
SMO-204ENST00000495998 IGF1RP08069 1367 aa22.54■■□□□ 1.2
SMO-204ENST00000495998 CLASP1Q7Z460 1538 aa22.54■■□□□ 1.2
SMO-204ENST00000495998 TRIM41Q8WV44 630 aa22.53■■□□□ 1.2
SMO-204ENST00000495998 NUP160Q12769 1436 aa22.48■■□□□ 1.19
SMO-204ENST00000495998 ARHGEF11O15085 1522 aa22.47■■□□□ 1.19
SMO-204ENST00000495998 RIMBP3CA6NJZ7 1639 aa22.46■■□□□ 1.19
SMO-204ENST00000495998 RIMBP3BA6NNM3 1639 aa22.46■■□□□ 1.19
SMO-204ENST00000495998 RIMBP3Q9UFD9 1639 aa22.46■■□□□ 1.19
SMO-204ENST00000495998 CUL7Q14999 1698 aa22.46■■□□□ 1.19
SMO-204ENST00000495998 CEP170Q5SW79 1584 aa22.44■■□□□ 1.18
SMO-204ENST00000495998 RUSC2Q8N2Y8 1516 aa22.41■■□□□ 1.18
SMO-204ENST00000495998 CARMIL1Q5VZK9 1371 aa22.38■■□□□ 1.17
SMO-204ENST00000495998 CHIC1Q5VXU3 224 aa22.3■■□□□ 1.16
SMO-204ENST00000495998 SHROOM2Q13796 1616 aa22.3■■□□□ 1.16
SMO-204ENST00000495998 ARAP1Q96P48 1450 aa22.29■■□□□ 1.16
SMO-204ENST00000495998 RAPGEF2Q9Y4G8 1499 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms