RNA–Protein interactions for RNA: ENST00000495954.5

SCHIP1-208, Transcript of schwannomin interacting protein 1, humanhuman

TSL 2

Gene SCHIP1, Length 1,000 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCHIP1-208ENST00000495954 NISCHQ9Y2I1 1504 aa29.06■■■□□ 2.24
SCHIP1-208ENST00000495954 CCDC180Q9P1Z9 1646 aa26.06■■□□□ 1.76
SCHIP1-208ENST00000495954 ABCC9O60706 1549 aa25.9■■□□□ 1.74
SCHIP1-208ENST00000495954 AEBP2Q6ZN18 517 aaPredicted RBP25.88■■□□□ 1.73
SCHIP1-208ENST00000495954 RB1CC1Q8TDY2 1594 aa24.7■■□□□ 1.54
SCHIP1-208ENST00000495954 DNAJC5BQ9UF47 199 aa24.67■■□□□ 1.54
SCHIP1-208ENST00000495954 NACADO15069 1562 aa24.57■■□□□ 1.52
SCHIP1-208ENST00000495954 CHIC1Q5VXU3 224 aa24.46■■□□□ 1.51
SCHIP1-208ENST00000495954 DCAF8L2P0C7V8 631 aa24.35■■□□□ 1.49
SCHIP1-208ENST00000495954 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
SCHIP1-208ENST00000495954 UNC13AQ9UPW8 1703 aa24.18■■□□□ 1.46
SCHIP1-208ENST00000495954 ZCCHC6Q5VYS8 1495 aaKnown RBP24.14■■□□□ 1.46
SCHIP1-208ENST00000495954 PABPN1Q86U42 306 aaKnown RBP eCLIP24.07■■□□□ 1.44
SCHIP1-208ENST00000495954 DCAF1Q9Y4B6 1507 aa24.04■■□□□ 1.44
SCHIP1-208ENST00000495954 BICRAQ9NZM4 1560 aa23.99■■□□□ 1.43
SCHIP1-208ENST00000495954 SCRIBQ14160 1630 aa23.72■■□□□ 1.39
SCHIP1-208ENST00000495954 SHROOM4Q9ULL8 1493 aa23.69■■□□□ 1.38
SCHIP1-208ENST00000495954 CC2D2AQ9P2K1 1620 aa23.38■■□□□ 1.33
SCHIP1-208ENST00000495954 EIF4G1Q04637 1599 aaKnown RBP23.37■■□□□ 1.33
SCHIP1-208ENST00000495954 CECR2Q9BXF3 1484 aa23.34■■□□□ 1.33
SCHIP1-208ENST00000495954 DNAJC5Q9H3Z4 198 aa22.84■■□□□ 1.25
SCHIP1-208ENST00000495954 SMARCA4P51532 1647 aa22.66■■□□□ 1.22
SCHIP1-208ENST00000495954 NCAPD3P42695 1498 aa22.66■■□□□ 1.22
SCHIP1-208ENST00000495954 ATAD2BQ9ULI0 1458 aa22.61■■□□□ 1.21
SCHIP1-208ENST00000495954 SMARCA2P51531 1590 aa22.58■■□□□ 1.2
SCHIP1-208ENST00000495954 BAZ1AQ9NRL2 1556 aaPredicted RBP22.56■■□□□ 1.2
SCHIP1-208ENST00000495954 HMGXB3Q12766 1538 aa22.54■■□□□ 1.2
SCHIP1-208ENST00000495954 PEG3Q9GZU2 1588 aa22.45■■□□□ 1.18
SCHIP1-208ENST00000495954 CUX2O14529 1486 aa22.41■■□□□ 1.18
SCHIP1-208ENST00000495954 BAZ1BQ9UIG0 1483 aaKnown RBP22.41■■□□□ 1.18
SCHIP1-208ENST00000495954 MROH2BQ7Z745 1585 aa22.39■■□□□ 1.18
SCHIP1-208ENST00000495954 ERCC6Q03468 1493 aa22.34■■□□□ 1.17
SCHIP1-208ENST00000495954 NESP48681 1621 aa22.25■■□□□ 1.15
SCHIP1-208ENST00000495954 WIZO95785 1651 aa22.15■■□□□ 1.14
SCHIP1-208ENST00000495954 LAMC3Q9Y6N6 1575 aa22.15■■□□□ 1.14
SCHIP1-208ENST00000495954 THOC2Q8NI27 1593 aaKnown RBP22.04■■□□□ 1.12
SCHIP1-208ENST00000495954 KIF21AQ7Z4S6 1674 aa22.01■■□□□ 1.11
SCHIP1-208ENST00000495954 SENP3Q9H4L4 574 aaPredicted RBP22■■□□□ 1.11
SCHIP1-208ENST00000495954 PDS5BQ9NTI5 1447 aa21.97■■□□□ 1.11
SCHIP1-208ENST00000495954 RSF1Q96T23 1441 aaPredicted RBP21.97■■□□□ 1.11
SCHIP1-208ENST00000495954 CADPSQ9ULU8 1353 aa21.96■■□□□ 1.11
SCHIP1-208ENST00000495954 TOP2AP11388 1531 aaKnown RBP21.89■■□□□ 1.09
SCHIP1-208ENST00000495954 MRC2Q9UBG0 1479 aa21.8■■□□□ 1.08
SCHIP1-208ENST00000495954 WDR62O43379 1518 aa21.76■■□□□ 1.07
SCHIP1-208ENST00000495954 CFTRP13569 1480 aa21.76■■□□□ 1.07
SCHIP1-208ENST00000495954 CEP164Q9UPV0 1460 aa21.75■■□□□ 1.07
SCHIP1-208ENST00000495954 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
SCHIP1-208ENST00000495954 FANCD2Q9BXW9 1451 aa21.72■■□□□ 1.07
SCHIP1-208ENST00000495954 TRIM41Q8WV44 630 aa21.72■■□□□ 1.07
SCHIP1-208ENST00000495954 PRDM2Q13029 1718 aa21.63■■□□□ 1.05
SCHIP1-208ENST00000495954 CCDC88BA6NC98 1476 aa21.6■■□□□ 1.05
SCHIP1-208ENST00000495954 URB2Q14146 1524 aaKnown RBP21.55■■□□□ 1.04
SCHIP1-208ENST00000495954 TOPBP1Q92547 1522 aa21.34■■□□□ 1.01
SCHIP1-208ENST00000495954 OSCARQ8IYS5 282 aa21.32■■□□□ 1
SCHIP1-208ENST00000495954 IFT140Q96RY7 1462 aa21.3■■□□□ 1
SCHIP1-208ENST00000495954 ABCC8Q09428 1581 aa21.3■■□□□ 1
SCHIP1-208ENST00000495954 DNMBPQ6XZF7 1577 aa21.29■■□□□ 1
SCHIP1-208ENST00000495954 ZNF608Q9ULD9 1512 aaPredicted RBP21.24■□□□□ 0.99
SCHIP1-208ENST00000495954 EIF4G3O43432 1585 aaKnown RBP21.18■□□□□ 0.98
SCHIP1-208ENST00000495954 RIMBP3CA6NJZ7 1639 aa21.16■□□□□ 0.98
SCHIP1-208ENST00000495954 RIMBP3BA6NNM3 1639 aa21.16■□□□□ 0.98
SCHIP1-208ENST00000495954 RIMBP3Q9UFD9 1639 aa21.16■□□□□ 0.98
SCHIP1-208ENST00000495954 TARBP1Q13395 1621 aaKnown RBP21.15■□□□□ 0.98
SCHIP1-208ENST00000495954 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
SCHIP1-208ENST00000495954 AQRO60306 1485 aaKnown RBP eCLIP21.05■□□□□ 0.96
SCHIP1-208ENST00000495954 SUPT5HO00267 1087 aaKnown RBP21.04■□□□□ 0.96
SCHIP1-208ENST00000495954 CUX1P39880 1505 aa21.04■□□□□ 0.96
SCHIP1-208ENST00000495954 RAD54L2Q9Y4B4 1467 aa21.03■□□□□ 0.96
SCHIP1-208ENST00000495954 ARHGEF11O15085 1522 aa21.03■□□□□ 0.96
SCHIP1-208ENST00000495954 FGD5Q6ZNL6 1462 aa21.02■□□□□ 0.96
SCHIP1-208ENST00000495954 SOGA1O94964 1423 aa21.01■□□□□ 0.95
SCHIP1-208ENST00000495954 CHD1O14646 1710 aa20.99■□□□□ 0.95
SCHIP1-208ENST00000495954 WDR97A6NE52 1622 aa20.98■□□□□ 0.95
SCHIP1-208ENST00000495954 TDRD9Q8NDG6 1382 aaKnown RBP20.94■□□□□ 0.94
SCHIP1-208ENST00000495954 CYB5RLQ6IPT4 315 aa20.89■□□□□ 0.93
SCHIP1-208ENST00000495954 SNAPC4Q5SXM2 1469 aa20.88■□□□□ 0.93
SCHIP1-208ENST00000495954 GRIN2BQ13224 1484 aa20.83■□□□□ 0.93
SCHIP1-208ENST00000495954 MAGI1Q96QZ7 1491 aaPredicted RBP20.83■□□□□ 0.93
SCHIP1-208ENST00000495954 FBLN2P98095 1184 aa20.83■□□□□ 0.93
SCHIP1-208ENST00000495954 PBRM1Q86U86 1689 aa20.81■□□□□ 0.92
SCHIP1-208ENST00000495954 ARAP1Q96P48 1450 aa20.81■□□□□ 0.92
SCHIP1-208ENST00000495954 ABCA10Q8WWZ4 1543 aa20.8■□□□□ 0.92
SCHIP1-208ENST00000495954 ABCA5Q8WWZ7 1642 aa20.79■□□□□ 0.92
SCHIP1-208ENST00000495954 BIVM-ERCC5R4GMW8 1640 aa20.78■□□□□ 0.92
SCHIP1-208ENST00000495954 GAPVD1Q14C86 1478 aa20.77■□□□□ 0.92
SCHIP1-208ENST00000495954 TRHP20396 242 aaPredicted RBP20.76■□□□□ 0.91
SCHIP1-208ENST00000495954 SYNJ2O15056 1496 aa20.75■□□□□ 0.91
SCHIP1-208ENST00000495954 TOP2BQ02880 1626 aa20.75■□□□□ 0.91
SCHIP1-208ENST00000495954 CLASP1Q7Z460 1538 aa20.75■□□□□ 0.91
SCHIP1-208ENST00000495954 SYNJ1O43426 1573 aa20.74■□□□□ 0.91
SCHIP1-208ENST00000495954 WRNQ14191 1432 aaPredicted RBP eCLIP20.73■□□□□ 0.91
SCHIP1-208ENST00000495954 CHMP7Q8WUX9 453 aaPredicted RBP20.72■□□□□ 0.91
SCHIP1-208ENST00000495954 ADAMTS12P58397 1594 aa20.62■□□□□ 0.89
SCHIP1-208ENST00000495954 GRIN2AQ12879 1464 aa20.57■□□□□ 0.88
SCHIP1-208ENST00000495954 FOXD1Q16676 465 aa20.56■□□□□ 0.88
SCHIP1-208ENST00000495954 ERICH3Q5RHP9 1530 aa20.55■□□□□ 0.88
SCHIP1-208ENST00000495954 FHAD1B1AJZ9 1412 aa20.52■□□□□ 0.87
SCHIP1-208ENST00000495954 CEP170Q5SW79 1584 aa20.51■□□□□ 0.87
SCHIP1-208ENST00000495954 NUP160Q12769 1436 aa20.5■□□□□ 0.87
SCHIP1-208ENST00000495954 ERCC6L2Q5T890 1561 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 172.9 ms