RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 NISCHQ9Y2I1 1504 aa33.99■■■■□ 3.03
TFE3-205ENST00000495940 ABCC9O60706 1549 aa31.54■■■□□ 2.64
TFE3-205ENST00000495940 CCDC180Q9P1Z9 1646 aa30.88■■■□□ 2.53
TFE3-205ENST00000495940 DNAJC5BQ9UF47 199 aa30.14■■■□□ 2.42
TFE3-205ENST00000495940 RB1CC1Q8TDY2 1594 aa29.68■■■□□ 2.34
TFE3-205ENST00000495940 NACADO15069 1562 aa29.27■■■□□ 2.28
TFE3-205ENST00000495940 UNC13AQ9UPW8 1703 aa29.19■■■□□ 2.26
TFE3-205ENST00000495940 PABPN1Q86U42 306 aaKnown RBP eCLIP29.18■■■□□ 2.26
TFE3-205ENST00000495940 BICRAQ9NZM4 1560 aa28.92■■■□□ 2.22
TFE3-205ENST00000495940 DCAF8L2P0C7V8 631 aa28.89■■■□□ 2.22
TFE3-205ENST00000495940 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
TFE3-205ENST00000495940 CC2D2AQ9P2K1 1620 aa28.48■■■□□ 2.15
TFE3-205ENST00000495940 CECR2Q9BXF3 1484 aa28.44■■■□□ 2.14
TFE3-205ENST00000495940 SHROOM4Q9ULL8 1493 aa28.32■■■□□ 2.12
TFE3-205ENST00000495940 EIF4G1Q04637 1599 aaKnown RBP28.23■■■□□ 2.11
TFE3-205ENST00000495940 SCRIBQ14160 1630 aa28.15■■■□□ 2.1
TFE3-205ENST00000495940 DNAJC5Q9H3Z4 198 aa28.09■■■□□ 2.09
TFE3-205ENST00000495940 ZCCHC6Q5VYS8 1495 aaKnown RBP28.07■■■□□ 2.08
TFE3-205ENST00000495940 DCAF1Q9Y4B6 1507 aa27.99■■■□□ 2.07
TFE3-205ENST00000495940 CUX2O14529 1486 aa27.4■■□□□ 1.98
TFE3-205ENST00000495940 ERCC6Q03468 1493 aa27.24■■□□□ 1.95
TFE3-205ENST00000495940 NCAPD3P42695 1498 aa26.99■■□□□ 1.91
TFE3-205ENST00000495940 NESP48681 1621 aa26.93■■□□□ 1.9
TFE3-205ENST00000495940 ATAD2BQ9ULI0 1458 aa26.87■■□□□ 1.89
TFE3-205ENST00000495940 THOC2Q8NI27 1593 aaKnown RBP26.84■■□□□ 1.89
TFE3-205ENST00000495940 HMGXB3Q12766 1538 aa26.81■■□□□ 1.88
TFE3-205ENST00000495940 SMARCA2P51531 1590 aa26.75■■□□□ 1.87
TFE3-205ENST00000495940 SMARCA4P51532 1647 aa26.74■■□□□ 1.87
TFE3-205ENST00000495940 TRIM41Q8WV44 630 aa26.66■■□□□ 1.86
TFE3-205ENST00000495940 KIF21AQ7Z4S6 1674 aa26.63■■□□□ 1.85
TFE3-205ENST00000495940 BAZ1BQ9UIG0 1483 aaKnown RBP26.58■■□□□ 1.85
TFE3-205ENST00000495940 LAMC3Q9Y6N6 1575 aa26.57■■□□□ 1.84
TFE3-205ENST00000495940 PEG3Q9GZU2 1588 aa26.43■■□□□ 1.82
TFE3-205ENST00000495940 BAZ1AQ9NRL2 1556 aaPredicted RBP26.43■■□□□ 1.82
TFE3-205ENST00000495940 PDS5BQ9NTI5 1447 aa26.34■■□□□ 1.81
TFE3-205ENST00000495940 MRC2Q9UBG0 1479 aa26.25■■□□□ 1.79
TFE3-205ENST00000495940 MROH2BQ7Z745 1585 aa26.24■■□□□ 1.79
TFE3-205ENST00000495940 WDR62O43379 1518 aa26.24■■□□□ 1.79
TFE3-205ENST00000495940 CADPSQ9ULU8 1353 aa26.12■■□□□ 1.77
TFE3-205ENST00000495940 CEP164Q9UPV0 1460 aa26.01■■□□□ 1.75
TFE3-205ENST00000495940 WIZO95785 1651 aa25.94■■□□□ 1.74
TFE3-205ENST00000495940 OSCARQ8IYS5 282 aa25.91■■□□□ 1.74
TFE3-205ENST00000495940 FANCD2Q9BXW9 1451 aa25.91■■□□□ 1.74
TFE3-205ENST00000495940 RIMBP3CA6NJZ7 1639 aa25.89■■□□□ 1.74
TFE3-205ENST00000495940 RIMBP3BA6NNM3 1639 aa25.89■■□□□ 1.74
TFE3-205ENST00000495940 RIMBP3Q9UFD9 1639 aa25.89■■□□□ 1.74
TFE3-205ENST00000495940 URB2Q14146 1524 aaKnown RBP25.79■■□□□ 1.72
TFE3-205ENST00000495940 CFTRP13569 1480 aa25.72■■□□□ 1.71
TFE3-205ENST00000495940 ARHGEF11O15085 1522 aa25.68■■□□□ 1.7
TFE3-205ENST00000495940 PRDM2Q13029 1718 aa25.59■■□□□ 1.69
TFE3-205ENST00000495940 ZNF608Q9ULD9 1512 aaPredicted RBP25.58■■□□□ 1.69
TFE3-205ENST00000495940 TOP2AP11388 1531 aaKnown RBP25.51■■□□□ 1.67
TFE3-205ENST00000495940 EIF4G3O43432 1585 aaKnown RBP25.47■■□□□ 1.67
TFE3-205ENST00000495940 IFT140Q96RY7 1462 aa25.47■■□□□ 1.67
TFE3-205ENST00000495940 CHD1O14646 1710 aa25.45■■□□□ 1.66
TFE3-205ENST00000495940 CYB5RLQ6IPT4 315 aa25.41■■□□□ 1.66
TFE3-205ENST00000495940 ARAP1Q96P48 1450 aa25.4■■□□□ 1.66
TFE3-205ENST00000495940 RSF1Q96T23 1441 aaPredicted RBP25.37■■□□□ 1.65
TFE3-205ENST00000495940 TRHP20396 242 aaPredicted RBP25.36■■□□□ 1.65
TFE3-205ENST00000495940 TOPBP1Q92547 1522 aa25.36■■□□□ 1.65
TFE3-205ENST00000495940 TARBP1Q13395 1621 aaKnown RBP25.23■■□□□ 1.63
TFE3-205ENST00000495940 DNMBPQ6XZF7 1577 aa25.22■■□□□ 1.63
TFE3-205ENST00000495940 AQRO60306 1485 aaKnown RBP eCLIP25.21■■□□□ 1.63
TFE3-205ENST00000495940 CCDC88BA6NC98 1476 aa25.18■■□□□ 1.62
TFE3-205ENST00000495940 ABCC8Q09428 1581 aa25.13■■□□□ 1.61
TFE3-205ENST00000495940 FBLN2P98095 1184 aa25.11■■□□□ 1.61
TFE3-205ENST00000495940 AEBP2Q6ZN18 517 aaPredicted RBP25.1■■□□□ 1.61
TFE3-205ENST00000495940 POLA1P09884 1462 aaPredicted RBP25.06■■□□□ 1.6
TFE3-205ENST00000495940 CLASP1Q7Z460 1538 aa25.06■■□□□ 1.6
TFE3-205ENST00000495940 RAD54L2Q9Y4B4 1467 aa24.99■■□□□ 1.59
TFE3-205ENST00000495940 SNAPC4Q5SXM2 1469 aa24.98■■□□□ 1.59
TFE3-205ENST00000495940 SYNJ1O43426 1573 aa24.93■■□□□ 1.58
TFE3-205ENST00000495940 TDRD9Q8NDG6 1382 aaKnown RBP24.93■■□□□ 1.58
TFE3-205ENST00000495940 WDR97A6NE52 1622 aa24.85■■□□□ 1.57
TFE3-205ENST00000495940 SOGA1O94964 1423 aa24.85■■□□□ 1.57
TFE3-205ENST00000495940 MAGI1Q96QZ7 1491 aaPredicted RBP24.83■■□□□ 1.56
TFE3-205ENST00000495940 FGD5Q6ZNL6 1462 aa24.81■■□□□ 1.56
TFE3-205ENST00000495940 GAPVD1Q14C86 1478 aa24.77■■□□□ 1.56
TFE3-205ENST00000495940 CHMP7Q8WUX9 453 aaPredicted RBP24.77■■□□□ 1.56
TFE3-205ENST00000495940 PBRM1Q86U86 1689 aa24.77■■□□□ 1.56
TFE3-205ENST00000495940 SYNJ2O15056 1496 aa24.76■■□□□ 1.55
TFE3-205ENST00000495940 GRIN2BQ13224 1484 aa24.74■■□□□ 1.55
TFE3-205ENST00000495940 CUX1P39880 1505 aa24.7■■□□□ 1.54
TFE3-205ENST00000495940 ERCC6L2Q5T890 1561 aa24.67■■□□□ 1.54
TFE3-205ENST00000495940 ABCA5Q8WWZ7 1642 aa24.57■■□□□ 1.52
TFE3-205ENST00000495940 KIF13AQ9H1H9 1805 aa24.56■■□□□ 1.52
TFE3-205ENST00000495940 CEP170Q5SW79 1584 aa24.5■■□□□ 1.51
TFE3-205ENST00000495940 GRIN2AQ12879 1464 aa24.46■■□□□ 1.51
TFE3-205ENST00000495940 ABCA10Q8WWZ4 1543 aa24.45■■□□□ 1.5
TFE3-205ENST00000495940 ADAMTS12P58397 1594 aa24.44■■□□□ 1.5
TFE3-205ENST00000495940 SHROOM2Q13796 1616 aa24.43■■□□□ 1.5
TFE3-205ENST00000495940 NUP160Q12769 1436 aa24.39■■□□□ 1.5
TFE3-205ENST00000495940 DIP2BQ9P265 1576 aa24.22■■□□□ 1.47
TFE3-205ENST00000495940 FHAD1B1AJZ9 1412 aa24.2■■□□□ 1.46
TFE3-205ENST00000495940 ABCC10Q5T3U5 1492 aa24.19■■□□□ 1.46
TFE3-205ENST00000495940 PRG4Q92954 1404 aaPredicted RBP24.19■■□□□ 1.46
TFE3-205ENST00000495940 KDM6BO15054 1643 aa24.18■■□□□ 1.46
TFE3-205ENST00000495940 BIVM-ERCC5R4GMW8 1640 aa24.15■■□□□ 1.46
TFE3-205ENST00000495940 KDM4FA0A1W2PPD8 638 aa24.15■■□□□ 1.46
TFE3-205ENST00000495940 WRNQ14191 1432 aaPredicted RBP eCLIP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms