RNA–Protein interactions for RNA: ENST00000495934.2

C9orf78-207, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-207ENST00000495934 NISCHQ9Y2I1 1504 aa26.46■■□□□ 1.83
C9orf78-207ENST00000495934 ABCC9O60706 1549 aa24.71■■□□□ 1.55
C9orf78-207ENST00000495934 CCDC180Q9P1Z9 1646 aa24.06■■□□□ 1.44
C9orf78-207ENST00000495934 DNAJC5BQ9UF47 199 aa23.74■■□□□ 1.39
C9orf78-207ENST00000495934 RB1CC1Q8TDY2 1594 aa23.22■■□□□ 1.31
C9orf78-207ENST00000495934 NACADO15069 1562 aa22.89■■□□□ 1.25
C9orf78-207ENST00000495934 PABPN1Q86U42 306 aaKnown RBP eCLIP22.87■■□□□ 1.25
C9orf78-207ENST00000495934 UNC13AQ9UPW8 1703 aa22.74■■□□□ 1.23
C9orf78-207ENST00000495934 DCAF8L2P0C7V8 631 aa22.61■■□□□ 1.21
C9orf78-207ENST00000495934 BICRAQ9NZM4 1560 aa22.57■■□□□ 1.2
C9orf78-207ENST00000495934 MYO15BQ96JP2 1530 aa22.33■■□□□ 1.17
C9orf78-207ENST00000495934 CECR2Q9BXF3 1484 aa22.32■■□□□ 1.16
C9orf78-207ENST00000495934 CC2D2AQ9P2K1 1620 aa22.29■■□□□ 1.16
C9orf78-207ENST00000495934 DNAJC5Q9H3Z4 198 aa22.28■■□□□ 1.16
C9orf78-207ENST00000495934 SHROOM4Q9ULL8 1493 aa22.19■■□□□ 1.14
C9orf78-207ENST00000495934 EIF4G1Q04637 1599 aaKnown RBP22.08■■□□□ 1.12
C9orf78-207ENST00000495934 SCRIBQ14160 1630 aa21.89■■□□□ 1.09
C9orf78-207ENST00000495934 DCAF1Q9Y4B6 1507 aa21.8■■□□□ 1.08
C9orf78-207ENST00000495934 ZCCHC6Q5VYS8 1495 aaKnown RBP21.79■■□□□ 1.08
C9orf78-207ENST00000495934 CUX2O14529 1486 aa21.57■■□□□ 1.04
C9orf78-207ENST00000495934 ERCC6Q03468 1493 aa21.39■■□□□ 1.01
C9orf78-207ENST00000495934 AEBP2Q6ZN18 517 aaPredicted RBP21.29■■□□□ 1
C9orf78-207ENST00000495934 NCAPD3P42695 1498 aa21.12■□□□□ 0.97
C9orf78-207ENST00000495934 TRIM41Q8WV44 630 aa21.06■□□□□ 0.96
C9orf78-207ENST00000495934 NESP48681 1621 aa21.04■□□□□ 0.96
C9orf78-207ENST00000495934 ATAD2BQ9ULI0 1458 aa20.97■□□□□ 0.95
C9orf78-207ENST00000495934 THOC2Q8NI27 1593 aaKnown RBP20.97■□□□□ 0.95
C9orf78-207ENST00000495934 HMGXB3Q12766 1538 aa20.94■□□□□ 0.94
C9orf78-207ENST00000495934 SMARCA2P51531 1590 aa20.89■□□□□ 0.94
C9orf78-207ENST00000495934 SMARCA4P51532 1647 aa20.81■□□□□ 0.92
C9orf78-207ENST00000495934 LAMC3Q9Y6N6 1575 aa20.77■□□□□ 0.92
C9orf78-207ENST00000495934 KIF21AQ7Z4S6 1674 aa20.77■□□□□ 0.91
C9orf78-207ENST00000495934 BAZ1BQ9UIG0 1483 aaKnown RBP20.75■□□□□ 0.91
C9orf78-207ENST00000495934 PDS5BQ9NTI5 1447 aa20.66■□□□□ 0.9
C9orf78-207ENST00000495934 PEG3Q9GZU2 1588 aa20.59■□□□□ 0.89
C9orf78-207ENST00000495934 BAZ1AQ9NRL2 1556 aaPredicted RBP20.59■□□□□ 0.89
C9orf78-207ENST00000495934 MRC2Q9UBG0 1479 aa20.54■□□□□ 0.88
C9orf78-207ENST00000495934 WDR62O43379 1518 aa20.52■□□□□ 0.87
C9orf78-207ENST00000495934 CADPSQ9ULU8 1353 aa20.45■□□□□ 0.86
C9orf78-207ENST00000495934 OSCARQ8IYS5 282 aa20.44■□□□□ 0.86
C9orf78-207ENST00000495934 MROH2BQ7Z745 1585 aa20.38■□□□□ 0.85
C9orf78-207ENST00000495934 CEP164Q9UPV0 1460 aa20.32■□□□□ 0.84
C9orf78-207ENST00000495934 RIMBP3CA6NJZ7 1639 aa20.29■□□□□ 0.84
C9orf78-207ENST00000495934 RIMBP3BA6NNM3 1639 aa20.29■□□□□ 0.84
C9orf78-207ENST00000495934 RIMBP3Q9UFD9 1639 aa20.29■□□□□ 0.84
C9orf78-207ENST00000495934 FANCD2Q9BXW9 1451 aa20.24■□□□□ 0.83
C9orf78-207ENST00000495934 ARHGEF11O15085 1522 aa20.15■□□□□ 0.82
C9orf78-207ENST00000495934 WIZO95785 1651 aa20.13■□□□□ 0.81
C9orf78-207ENST00000495934 URB2Q14146 1524 aaKnown RBP20.12■□□□□ 0.81
C9orf78-207ENST00000495934 CFTRP13569 1480 aa20.08■□□□□ 0.81
C9orf78-207ENST00000495934 TRHP20396 242 aaPredicted RBP20.02■□□□□ 0.8
C9orf78-207ENST00000495934 CYB5RLQ6IPT4 315 aa20.01■□□□□ 0.79
C9orf78-207ENST00000495934 CHIC1Q5VXU3 224 aa20■□□□□ 0.79
C9orf78-207ENST00000495934 ZNF608Q9ULD9 1512 aaPredicted RBP19.98■□□□□ 0.79
C9orf78-207ENST00000495934 IFT140Q96RY7 1462 aa19.93■□□□□ 0.78
C9orf78-207ENST00000495934 ARAP1Q96P48 1450 aa19.91■□□□□ 0.78
C9orf78-207ENST00000495934 PRDM2Q13029 1718 aa19.88■□□□□ 0.77
C9orf78-207ENST00000495934 CHD1O14646 1710 aa19.85■□□□□ 0.77
C9orf78-207ENST00000495934 EIF4G3O43432 1585 aaKnown RBP19.85■□□□□ 0.77
C9orf78-207ENST00000495934 TOP2AP11388 1531 aaKnown RBP19.81■□□□□ 0.76
C9orf78-207ENST00000495934 TOPBP1Q92547 1522 aa19.79■□□□□ 0.76
C9orf78-207ENST00000495934 RSF1Q96T23 1441 aaPredicted RBP19.78■□□□□ 0.76
C9orf78-207ENST00000495934 FBLN2P98095 1184 aa19.71■□□□□ 0.75
C9orf78-207ENST00000495934 AQRO60306 1485 aaKnown RBP eCLIP19.71■□□□□ 0.755e-8■■□□□ 12.3
C9orf78-207ENST00000495934 ABCC8Q09428 1581 aa19.67■□□□□ 0.74
C9orf78-207ENST00000495934 TARBP1Q13395 1621 aaKnown RBP19.66■□□□□ 0.74
C9orf78-207ENST00000495934 DNMBPQ6XZF7 1577 aa19.66■□□□□ 0.74
C9orf78-207ENST00000495934 CLASP1Q7Z460 1538 aa19.58■□□□□ 0.73
C9orf78-207ENST00000495934 CCDC88BA6NC98 1476 aa19.58■□□□□ 0.72
C9orf78-207ENST00000495934 POLA1P09884 1462 aaPredicted RBP19.54■□□□□ 0.72
C9orf78-207ENST00000495934 SYNJ1O43426 1573 aa19.5■□□□□ 0.71
C9orf78-207ENST00000495934 SNAPC4Q5SXM2 1469 aa19.5■□□□□ 0.71
C9orf78-207ENST00000495934 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
C9orf78-207ENST00000495934 TDRD9Q8NDG6 1382 aaKnown RBP19.47■□□□□ 0.71
C9orf78-207ENST00000495934 CHMP7Q8WUX9 453 aaPredicted RBP19.44■□□□□ 0.7
C9orf78-207ENST00000495934 SOGA1O94964 1423 aa19.42■□□□□ 0.7
C9orf78-207ENST00000495934 GAPVD1Q14C86 1478 aa19.41■□□□□ 0.7
C9orf78-207ENST00000495934 MAGI1Q96QZ7 1491 aaPredicted RBP19.41■□□□□ 0.7
C9orf78-207ENST00000495934 WDR97A6NE52 1622 aa19.41■□□□□ 0.7
C9orf78-207ENST00000495934 SYNJ2O15056 1496 aa19.35■□□□□ 0.69
C9orf78-207ENST00000495934 GRIN2BQ13224 1484 aa19.34■□□□□ 0.69
C9orf78-207ENST00000495934 FGD5Q6ZNL6 1462 aa19.32■□□□□ 0.68
C9orf78-207ENST00000495934 PBRM1Q86U86 1689 aa19.25■□□□□ 0.67
C9orf78-207ENST00000495934 ERCC6L2Q5T890 1561 aa19.23■□□□□ 0.67
C9orf78-207ENST00000495934 KIF13AQ9H1H9 1805 aa19.21■□□□□ 0.67
C9orf78-207ENST00000495934 CUX1P39880 1505 aa19.2■□□□□ 0.66
C9orf78-207ENST00000495934 ILDR1Q86SU0 546 aaPredicted RBP19.15■□□□□ 0.66
C9orf78-207ENST00000495934 CEP170Q5SW79 1584 aa19.14■□□□□ 0.65
C9orf78-207ENST00000495934 ABCA5Q8WWZ7 1642 aa19.11■□□□□ 0.65
C9orf78-207ENST00000495934 GRIN2AQ12879 1464 aa19.09■□□□□ 0.65
C9orf78-207ENST00000495934 ABCA10Q8WWZ4 1543 aa19.06■□□□□ 0.64
C9orf78-207ENST00000495934 SHROOM2Q13796 1616 aa19.06■□□□□ 0.64
C9orf78-207ENST00000495934 NUP160Q12769 1436 aa19.05■□□□□ 0.64
C9orf78-207ENST00000495934 KDM4FA0A1W2PPD8 638 aa19.03■□□□□ 0.64
C9orf78-207ENST00000495934 ADAMTS12P58397 1594 aa19.02■□□□□ 0.64
C9orf78-207ENST00000495934 FAM69CQ0P6D2 419 aa18.99■□□□□ 0.63
C9orf78-207ENST00000495934 ABCC10Q5T3U5 1492 aa18.97■□□□□ 0.63
C9orf78-207ENST00000495934 KDM6BO15054 1643 aa18.95■□□□□ 0.62
C9orf78-207ENST00000495934 DIP2BQ9P265 1576 aa18.93■□□□□ 0.62
C9orf78-207ENST00000495934 PRG4Q92954 1404 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms