RNA–Protein interactions for RNA: ENST00000495612.1

CLCN1-204, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 278 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-204ENST00000495612 NISCHQ9Y2I1 1504 aa26.53■■□□□ 1.84
CLCN1-204ENST00000495612 ABCC9O60706 1549 aa24.87■■□□□ 1.57
CLCN1-204ENST00000495612 DNAJC5BQ9UF47 199 aa24.11■■□□□ 1.45
CLCN1-204ENST00000495612 CCDC180Q9P1Z9 1646 aa24.1■■□□□ 1.45
CLCN1-204ENST00000495612 RB1CC1Q8TDY2 1594 aa23.37■■□□□ 1.33
CLCN1-204ENST00000495612 PABPN1Q86U42 306 aaKnown RBP eCLIP23.06■■□□□ 1.28
CLCN1-204ENST00000495612 NACADO15069 1562 aa23.05■■□□□ 1.28
CLCN1-204ENST00000495612 DNAJC5Q9H3Z4 198 aa22.8■■□□□ 1.24
CLCN1-204ENST00000495612 DCAF8L2P0C7V8 631 aa22.7■■□□□ 1.22
CLCN1-204ENST00000495612 BICRAQ9NZM4 1560 aa22.69■■□□□ 1.22
CLCN1-204ENST00000495612 UNC13AQ9UPW8 1703 aa22.67■■□□□ 1.22
CLCN1-204ENST00000495612 CECR2Q9BXF3 1484 aa22.54■■□□□ 1.2
CLCN1-204ENST00000495612 MYO15BQ96JP2 1530 aa22.53■■□□□ 1.2
CLCN1-204ENST00000495612 SHROOM4Q9ULL8 1493 aa22.43■■□□□ 1.18
CLCN1-204ENST00000495612 CC2D2AQ9P2K1 1620 aa22.42■■□□□ 1.18
CLCN1-204ENST00000495612 EIF4G1Q04637 1599 aaKnown RBP22.21■■□□□ 1.15
CLCN1-204ENST00000495612 DCAF1Q9Y4B6 1507 aa21.92■■□□□ 1.1
CLCN1-204ENST00000495612 CUX2O14529 1486 aa21.86■■□□□ 1.09
CLCN1-204ENST00000495612 SCRIBQ14160 1630 aa21.84■■□□□ 1.09
CLCN1-204ENST00000495612 ZCCHC6Q5VYS8 1495 aaKnown RBP21.8■■□□□ 1.08
CLCN1-204ENST00000495612 ERCC6Q03468 1493 aa21.57■■□□□ 1.04
CLCN1-204ENST00000495612 TRIM41Q8WV44 630 aa21.35■■□□□ 1.01
CLCN1-204ENST00000495612 NCAPD3P42695 1498 aa21.33■■□□□ 1.01
CLCN1-204ENST00000495612 NESP48681 1621 aa21.13■□□□□ 0.97
CLCN1-204ENST00000495612 ATAD2BQ9ULI0 1458 aa21.1■□□□□ 0.97
CLCN1-204ENST00000495612 THOC2Q8NI27 1593 aaKnown RBP21.07■□□□□ 0.96
CLCN1-204ENST00000495612 HMGXB3Q12766 1538 aa21.04■□□□□ 0.96
CLCN1-204ENST00000495612 SMARCA2P51531 1590 aa21■□□□□ 0.95
CLCN1-204ENST00000495612 LAMC3Q9Y6N6 1575 aa20.91■□□□□ 0.94
CLCN1-204ENST00000495612 PDS5BQ9NTI5 1447 aa20.87■□□□□ 0.93
CLCN1-204ENST00000495612 BAZ1BQ9UIG0 1483 aaKnown RBP20.82■□□□□ 0.92
CLCN1-204ENST00000495612 SMARCA4P51532 1647 aa20.81■□□□□ 0.92
CLCN1-204ENST00000495612 OSCARQ8IYS5 282 aa20.76■□□□□ 0.91
CLCN1-204ENST00000495612 KIF21AQ7Z4S6 1674 aa20.76■□□□□ 0.91
CLCN1-204ENST00000495612 PEG3Q9GZU2 1588 aa20.69■□□□□ 0.9
CLCN1-204ENST00000495612 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
CLCN1-204ENST00000495612 BAZ1AQ9NRL2 1556 aaPredicted RBP20.68■□□□□ 0.9
CLCN1-204ENST00000495612 WDR62O43379 1518 aa20.66■□□□□ 0.9
CLCN1-204ENST00000495612 CADPSQ9ULU8 1353 aa20.63■□□□□ 0.89
CLCN1-204ENST00000495612 RIMBP3CA6NJZ7 1639 aa20.44■□□□□ 0.86
CLCN1-204ENST00000495612 RIMBP3BA6NNM3 1639 aa20.44■□□□□ 0.86
CLCN1-204ENST00000495612 RIMBP3Q9UFD9 1639 aa20.44■□□□□ 0.86
CLCN1-204ENST00000495612 CEP164Q9UPV0 1460 aa20.43■□□□□ 0.86
CLCN1-204ENST00000495612 MROH2BQ7Z745 1585 aa20.38■□□□□ 0.85
CLCN1-204ENST00000495612 ARHGEF11O15085 1522 aa20.35■□□□□ 0.85
CLCN1-204ENST00000495612 FANCD2Q9BXW9 1451 aa20.35■□□□□ 0.85
CLCN1-204ENST00000495612 AEBP2Q6ZN18 517 aaPredicted RBP20.31■□□□□ 0.84
CLCN1-204ENST00000495612 TRHP20396 242 aaPredicted RBP20.29■□□□□ 0.84
CLCN1-204ENST00000495612 CYB5RLQ6IPT4 315 aa20.28■□□□□ 0.84
CLCN1-204ENST00000495612 CFTRP13569 1480 aa20.22■□□□□ 0.83
CLCN1-204ENST00000495612 URB2Q14146 1524 aaKnown RBP20.21■□□□□ 0.83
CLCN1-204ENST00000495612 IFT140Q96RY7 1462 aa20.09■□□□□ 0.81
CLCN1-204ENST00000495612 ZNF608Q9ULD9 1512 aaPredicted RBP20.08■□□□□ 0.81
CLCN1-204ENST00000495612 ARAP1Q96P48 1450 aa20.08■□□□□ 0.81
CLCN1-204ENST00000495612 WIZO95785 1651 aa20.04■□□□□ 0.8
CLCN1-204ENST00000495612 RSF1Q96T23 1441 aaPredicted RBP20.02■□□□□ 0.8
CLCN1-204ENST00000495612 EIF4G3O43432 1585 aaKnown RBP19.89■□□□□ 0.77
CLCN1-204ENST00000495612 TOPBP1Q92547 1522 aa19.86■□□□□ 0.77
CLCN1-204ENST00000495612 FBLN2P98095 1184 aa19.85■□□□□ 0.77
CLCN1-204ENST00000495612 ABCC8Q09428 1581 aa19.83■□□□□ 0.77
CLCN1-204ENST00000495612 CHD1O14646 1710 aa19.83■□□□□ 0.77
CLCN1-204ENST00000495612 AQRO60306 1485 aaKnown RBP eCLIP19.82■□□□□ 0.76
CLCN1-204ENST00000495612 TOP2AP11388 1531 aaKnown RBP19.81■□□□□ 0.76
CLCN1-204ENST00000495612 PRDM2Q13029 1718 aa19.76■□□□□ 0.75
CLCN1-204ENST00000495612 TARBP1Q13395 1621 aaKnown RBP19.73■□□□□ 0.75
CLCN1-204ENST00000495612 DNMBPQ6XZF7 1577 aa19.7■□□□□ 0.74
CLCN1-204ENST00000495612 CLASP1Q7Z460 1538 aa19.7■□□□□ 0.74
CLCN1-204ENST00000495612 CHMP7Q8WUX9 453 aaPredicted RBP19.62■□□□□ 0.73
CLCN1-204ENST00000495612 SYNJ1O43426 1573 aa19.61■□□□□ 0.73
CLCN1-204ENST00000495612 POLA1P09884 1462 aaPredicted RBP19.61■□□□□ 0.73
CLCN1-204ENST00000495612 CCDC88BA6NC98 1476 aa19.6■□□□□ 0.73
CLCN1-204ENST00000495612 GAPVD1Q14C86 1478 aa19.58■□□□□ 0.72
CLCN1-204ENST00000495612 TDRD9Q8NDG6 1382 aaKnown RBP19.57■□□□□ 0.72
CLCN1-204ENST00000495612 SNAPC4Q5SXM2 1469 aa19.57■□□□□ 0.72
CLCN1-204ENST00000495612 MAGI1Q96QZ7 1491 aaPredicted RBP19.54■□□□□ 0.72
CLCN1-204ENST00000495612 SOGA1O94964 1423 aa19.54■□□□□ 0.72
CLCN1-204ENST00000495612 ILDR1Q86SU0 546 aaPredicted RBP19.54■□□□□ 0.72
CLCN1-204ENST00000495612 WDR97A6NE52 1622 aa19.53■□□□□ 0.72
CLCN1-204ENST00000495612 RAD54L2Q9Y4B4 1467 aa19.53■□□□□ 0.72
CLCN1-204ENST00000495612 SYNJ2O15056 1496 aa19.49■□□□□ 0.71
CLCN1-204ENST00000495612 GRIN2BQ13224 1484 aa19.46■□□□□ 0.71
CLCN1-204ENST00000495612 FGD5Q6ZNL6 1462 aa19.35■□□□□ 0.69
CLCN1-204ENST00000495612 KDM4FA0A1W2PPD8 638 aa19.32■□□□□ 0.68
CLCN1-204ENST00000495612 ERCC6L2Q5T890 1561 aa19.27■□□□□ 0.68
CLCN1-204ENST00000495612 KIF13AQ9H1H9 1805 aa19.24■□□□□ 0.67
CLCN1-204ENST00000495612 CEP170Q5SW79 1584 aa19.21■□□□□ 0.67
CLCN1-204ENST00000495612 CUX1P39880 1505 aa19.2■□□□□ 0.66
CLCN1-204ENST00000495612 FAM69CQ0P6D2 419 aa19.19■□□□□ 0.66
CLCN1-204ENST00000495612 GRIN2AQ12879 1464 aa19.19■□□□□ 0.66
CLCN1-204ENST00000495612 NUP160Q12769 1436 aa19.18■□□□□ 0.66
CLCN1-204ENST00000495612 ABCC10Q5T3U5 1492 aa19.18■□□□□ 0.66
CLCN1-204ENST00000495612 PBRM1Q86U86 1689 aa19.17■□□□□ 0.66
CLCN1-204ENST00000495612 SHROOM2Q13796 1616 aa19.14■□□□□ 0.65
CLCN1-204ENST00000495612 ABCA10Q8WWZ4 1543 aa19.13■□□□□ 0.65
CLCN1-204ENST00000495612 ABCA5Q8WWZ7 1642 aa19.11■□□□□ 0.65
CLCN1-204ENST00000495612 NPM1P06748 294 aaKnown RBP eCLIP19.1■□□□□ 0.65
CLCN1-204ENST00000495612 MAPKBP1O60336 1514 aa19.08■□□□□ 0.64
CLCN1-204ENST00000495612 KDM6BO15054 1643 aa19.07■□□□□ 0.64
CLCN1-204ENST00000495612 PRG4Q92954 1404 aaPredicted RBP19.05■□□□□ 0.64
CLCN1-204ENST00000495612 DIP2BQ9P265 1576 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms