RNA–Protein interactions for RNA: ENST00000495311.1

POLR2B-210, Transcript of RNA polymerase II subunit B, humanhuman

TSL 3

Gene POLR2B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-210ENST00000495311 NISCHQ9Y2I1 1504 aa26.74■■□□□ 1.87
POLR2B-210ENST00000495311 ABCC9O60706 1549 aa24.15■■□□□ 1.46
POLR2B-210ENST00000495311 CCDC180Q9P1Z9 1646 aa24.06■■□□□ 1.44
POLR2B-210ENST00000495311 DNAJC5BQ9UF47 199 aa22.92■■□□□ 1.26
POLR2B-210ENST00000495311 RB1CC1Q8TDY2 1594 aa22.89■■□□□ 1.26
POLR2B-210ENST00000495311 NACADO15069 1562 aa22.69■■□□□ 1.22
POLR2B-210ENST00000495311 UNC13AQ9UPW8 1703 aa22.66■■□□□ 1.22
POLR2B-210ENST00000495311 BICRAQ9NZM4 1560 aa22.42■■□□□ 1.18
POLR2B-210ENST00000495311 PABPN1Q86U42 306 aaKnown RBP eCLIP22.36■■□□□ 1.17
POLR2B-210ENST00000495311 MYO15BQ96JP2 1530 aa22.35■■□□□ 1.17
POLR2B-210ENST00000495311 ZCCHC6Q5VYS8 1495 aaKnown RBP22.33■■□□□ 1.16
POLR2B-210ENST00000495311 DCAF8L2P0C7V8 631 aa22.22■■□□□ 1.15
POLR2B-210ENST00000495311 DCAF1Q9Y4B6 1507 aa22.21■■□□□ 1.15
POLR2B-210ENST00000495311 SHROOM4Q9ULL8 1493 aa21.93■■□□□ 1.1
POLR2B-210ENST00000495311 CC2D2AQ9P2K1 1620 aa21.9■■□□□ 1.1
POLR2B-210ENST00000495311 SCRIBQ14160 1630 aa21.86■■□□□ 1.09
POLR2B-210ENST00000495311 EIF4G1Q04637 1599 aaKnown RBP21.78■■□□□ 1.08
POLR2B-210ENST00000495311 CECR2Q9BXF3 1484 aa21.76■■□□□ 1.07
POLR2B-210ENST00000495311 DNAJC5Q9H3Z4 198 aa21.07■□□□□ 0.96
POLR2B-210ENST00000495311 NCAPD3P42695 1498 aa20.94■□□□□ 0.94
POLR2B-210ENST00000495311 CUX2O14529 1486 aa20.89■□□□□ 0.94
POLR2B-210ENST00000495311 ATAD2BQ9ULI0 1458 aa20.88■□□□□ 0.93
POLR2B-210ENST00000495311 SMARCA4P51532 1647 aa20.86■□□□□ 0.93
POLR2B-210ENST00000495311 HMGXB3Q12766 1538 aa20.83■□□□□ 0.92
POLR2B-210ENST00000495311 SMARCA2P51531 1590 aa20.76■□□□□ 0.91
POLR2B-210ENST00000495311 NESP48681 1621 aa20.76■□□□□ 0.91
POLR2B-210ENST00000495311 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
POLR2B-210ENST00000495311 PEG3Q9GZU2 1588 aa20.69■□□□□ 0.9
POLR2B-210ENST00000495311 THOC2Q8NI27 1593 aaKnown RBP20.68■□□□□ 0.9
POLR2B-210ENST00000495311 BAZ1AQ9NRL2 1556 aaPredicted RBP20.68■□□□□ 0.9
POLR2B-210ENST00000495311 BAZ1BQ9UIG0 1483 aaKnown RBP20.59■□□□□ 0.89
POLR2B-210ENST00000495311 KIF21AQ7Z4S6 1674 aa20.58■□□□□ 0.88
POLR2B-210ENST00000495311 MROH2BQ7Z745 1585 aa20.57■□□□□ 0.88
POLR2B-210ENST00000495311 LAMC3Q9Y6N6 1575 aa20.53■□□□□ 0.88
POLR2B-210ENST00000495311 RSF1Q96T23 1441 aaPredicted RBP20.51■□□□□ 0.87
POLR2B-210ENST00000495311 WIZO95785 1651 aa20.32■□□□□ 0.84
POLR2B-210ENST00000495311 PDS5BQ9NTI5 1447 aa20.28■□□□□ 0.84
POLR2B-210ENST00000495311 WDR62O43379 1518 aa20.27■□□□□ 0.83
POLR2B-210ENST00000495311 CADPSQ9ULU8 1353 aa20.23■□□□□ 0.83
POLR2B-210ENST00000495311 MRC2Q9UBG0 1479 aa20.22■□□□□ 0.83
POLR2B-210ENST00000495311 TOP2AP11388 1531 aaKnown RBP20.16■□□□□ 0.82
POLR2B-210ENST00000495311 SUPT5HO00267 1087 aaKnown RBP20.12■□□□□ 0.81
POLR2B-210ENST00000495311 CEP164Q9UPV0 1460 aa20.07■□□□□ 0.8
POLR2B-210ENST00000495311 FANCD2Q9BXW9 1451 aa20.05■□□□□ 0.8
POLR2B-210ENST00000495311 CFTRP13569 1480 aa20.04■□□□□ 0.8
POLR2B-210ENST00000495311 PRDM2Q13029 1718 aa20■□□□□ 0.79
POLR2B-210ENST00000495311 URB2Q14146 1524 aaKnown RBP19.99■□□□□ 0.79
POLR2B-210ENST00000495311 CCDC88BA6NC98 1476 aa19.96■□□□□ 0.79
POLR2B-210ENST00000495311 TRIM41Q8WV44 630 aa19.95■□□□□ 0.78
POLR2B-210ENST00000495311 RIMBP3CA6NJZ7 1639 aa19.77■□□□□ 0.76
POLR2B-210ENST00000495311 RIMBP3BA6NNM3 1639 aa19.77■□□□□ 0.76
POLR2B-210ENST00000495311 RIMBP3Q9UFD9 1639 aa19.77■□□□□ 0.76
POLR2B-210ENST00000495311 ZNF608Q9ULD9 1512 aaPredicted RBP19.76■□□□□ 0.75
POLR2B-210ENST00000495311 OSCARQ8IYS5 282 aa19.73■□□□□ 0.75
POLR2B-210ENST00000495311 TOPBP1Q92547 1522 aa19.69■□□□□ 0.74
POLR2B-210ENST00000495311 EIF4G3O43432 1585 aaKnown RBP19.68■□□□□ 0.74
POLR2B-210ENST00000495311 IFT140Q96RY7 1462 aa19.67■□□□□ 0.74
POLR2B-210ENST00000495311 CHD1O14646 1710 aa19.63■□□□□ 0.73
POLR2B-210ENST00000495311 TARBP1Q13395 1621 aaKnown RBP19.63■□□□□ 0.73
POLR2B-210ENST00000495311 ARHGEF11O15085 1522 aa19.63■□□□□ 0.73
POLR2B-210ENST00000495311 DNMBPQ6XZF7 1577 aa19.61■□□□□ 0.73
POLR2B-210ENST00000495311 ABCC8Q09428 1581 aa19.5■□□□□ 0.71
POLR2B-210ENST00000495311 AQRO60306 1485 aaKnown RBP eCLIP19.48■□□□□ 0.71
POLR2B-210ENST00000495311 POLA1P09884 1462 aaPredicted RBP19.48■□□□□ 0.71
POLR2B-210ENST00000495311 ARAP1Q96P48 1450 aa19.46■□□□□ 0.71
POLR2B-210ENST00000495311 RAD54L2Q9Y4B4 1467 aa19.4■□□□□ 0.7
POLR2B-210ENST00000495311 WDR97A6NE52 1622 aa19.36■□□□□ 0.69
POLR2B-210ENST00000495311 CLASP1Q7Z460 1538 aa19.36■□□□□ 0.69
POLR2B-210ENST00000495311 CUX1P39880 1505 aa19.32■□□□□ 0.68
POLR2B-210ENST00000495311 CYB5RLQ6IPT4 315 aa19.31■□□□□ 0.68
POLR2B-210ENST00000495311 FGD5Q6ZNL6 1462 aa19.3■□□□□ 0.68
POLR2B-210ENST00000495311 SNAPC4Q5SXM2 1469 aa19.29■□□□□ 0.68
POLR2B-210ENST00000495311 WRNQ14191 1432 aaPredicted RBP eCLIP19.29■□□□□ 0.68
POLR2B-210ENST00000495311 TDRD9Q8NDG6 1382 aaKnown RBP19.28■□□□□ 0.68
POLR2B-210ENST00000495311 SOGA1O94964 1423 aa19.26■□□□□ 0.67
POLR2B-210ENST00000495311 PBRM1Q86U86 1689 aa19.25■□□□□ 0.67
POLR2B-210ENST00000495311 MAGI1Q96QZ7 1491 aaPredicted RBP19.21■□□□□ 0.67
POLR2B-210ENST00000495311 TOP2BQ02880 1626 aa19.2■□□□□ 0.66
POLR2B-210ENST00000495311 SYNJ1O43426 1573 aa19.19■□□□□ 0.66
POLR2B-210ENST00000495311 FBLN2P98095 1184 aa19.18■□□□□ 0.66
POLR2B-210ENST00000495311 ABCA5Q8WWZ7 1642 aa19.18■□□□□ 0.66
POLR2B-210ENST00000495311 BIVM-ERCC5R4GMW8 1640 aa19.16■□□□□ 0.66
POLR2B-210ENST00000495311 GRIN2BQ13224 1484 aa19.16■□□□□ 0.66
POLR2B-210ENST00000495311 SYNJ2O15056 1496 aa19.15■□□□□ 0.66
POLR2B-210ENST00000495311 ABCA10Q8WWZ4 1543 aa19.08■□□□□ 0.64
POLR2B-210ENST00000495311 ERCC6L2Q5T890 1561 aa19.07■□□□□ 0.64
POLR2B-210ENST00000495311 GAPVD1Q14C86 1478 aa19.07■□□□□ 0.64
POLR2B-210ENST00000495311 TRHP20396 242 aaPredicted RBP19.06■□□□□ 0.64
POLR2B-210ENST00000495311 CHIC1Q5VXU3 224 aa19.06■□□□□ 0.64
POLR2B-210ENST00000495311 CHMP7Q8WUX9 453 aaPredicted RBP19.02■□□□□ 0.64
POLR2B-210ENST00000495311 ADAMTS12P58397 1594 aa19.02■□□□□ 0.63
POLR2B-210ENST00000495311 CEP170Q5SW79 1584 aa19■□□□□ 0.63
POLR2B-210ENST00000495311 SHROOM2Q13796 1616 aa18.98■□□□□ 0.63
POLR2B-210ENST00000495311 GRIN2AQ12879 1464 aa18.97■□□□□ 0.63
POLR2B-210ENST00000495311 NUP160Q12769 1436 aa18.94■□□□□ 0.62
POLR2B-210ENST00000495311 KIF13AQ9H1H9 1805 aa18.91■□□□□ 0.62
POLR2B-210ENST00000495311 KIF27Q86VH2 1401 aa18.88■□□□□ 0.61
POLR2B-210ENST00000495311 IGF1RP08069 1367 aa18.83■□□□□ 0.61
POLR2B-210ENST00000495311 ERICH3Q5RHP9 1530 aa18.82■□□□□ 0.6
POLR2B-210ENST00000495311 FHAD1B1AJZ9 1412 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms