RNA–Protein interactions for RNA: ENST00000494928.1

PHF8-218, Transcript of PHD finger protein 8, humanhuman

TSL 2

Gene PHF8, Length 432 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8-218ENST00000494928 NISCHQ9Y2I1 1504 aa17.92■□□□□ 0.46
PHF8-218ENST00000494928 ABCC9O60706 1549 aa16.75■□□□□ 0.27
PHF8-218ENST00000494928 CCDC180Q9P1Z9 1646 aa16.45■□□□□ 0.22
PHF8-218ENST00000494928 DNAJC5BQ9UF47 199 aa16.09■□□□□ 0.17
PHF8-218ENST00000494928 RB1CC1Q8TDY2 1594 aa15.82■□□□□ 0.12
PHF8-218ENST00000494928 NACADO15069 1562 aa15.59■□□□□ 0.09
PHF8-218ENST00000494928 UNC13AQ9UPW8 1703 aa15.55■□□□□ 0.08
PHF8-218ENST00000494928 PABPN1Q86U42 306 aaKnown RBP eCLIP15.4■□□□□ 0.06
PHF8-218ENST00000494928 BICRAQ9NZM4 1560 aa15.38■□□□□ 0.05
PHF8-218ENST00000494928 MYO15BQ96JP2 1530 aa15.25■□□□□ 0.03
PHF8-218ENST00000494928 DNAJC5Q9H3Z4 198 aa15.21■□□□□ 0.03
PHF8-218ENST00000494928 SHROOM4Q9ULL8 1493 aa15.2■□□□□ 0.02
PHF8-218ENST00000494928 CC2D2AQ9P2K1 1620 aa15.18■□□□□ 0.02
PHF8-218ENST00000494928 CECR2Q9BXF3 1484 aa15.17■□□□□ 0.02
PHF8-218ENST00000494928 DCAF8L2P0C7V8 631 aa15.09■□□□□ 0.01
PHF8-218ENST00000494928 AEBP2Q6ZN18 517 aaPredicted RBP15.08■□□□□ 0
PHF8-218ENST00000494928 EIF4G1Q04637 1599 aaKnown RBP15.03■□□□□ -0
PHF8-218ENST00000494928 DCAF1Q9Y4B6 1507 aa14.85□□□□□ -0.03
PHF8-218ENST00000494928 SCRIBQ14160 1630 aa14.82□□□□□ -0.04
PHF8-218ENST00000494928 ZCCHC6Q5VYS8 1495 aaKnown RBP14.77□□□□□ -0.04
PHF8-218ENST00000494928 CUX2O14529 1486 aa14.75□□□□□ -0.05
PHF8-218ENST00000494928 ERCC6Q03468 1493 aa14.51□□□□□ -0.09
PHF8-218ENST00000494928 CHIC1Q5VXU3 224 aa14.36□□□□□ -0.11
PHF8-218ENST00000494928 NCAPD3P42695 1498 aa14.35□□□□□ -0.11
PHF8-218ENST00000494928 THOC2Q8NI27 1593 aaKnown RBP14.33□□□□□ -0.12
PHF8-218ENST00000494928 HMGXB3Q12766 1538 aa14.27□□□□□ -0.12
PHF8-218ENST00000494928 NESP48681 1621 aa14.25□□□□□ -0.13
PHF8-218ENST00000494928 TRIM41Q8WV44 630 aa14.23□□□□□ -0.13
PHF8-218ENST00000494928 ATAD2BQ9ULI0 1458 aa14.22□□□□□ -0.13
PHF8-218ENST00000494928 SMARCA2P51531 1590 aa14.21□□□□□ -0.14
PHF8-218ENST00000494928 LAMC3Q9Y6N6 1575 aa14.17□□□□□ -0.14
PHF8-218ENST00000494928 KIF21AQ7Z4S6 1674 aa14.16□□□□□ -0.14
PHF8-218ENST00000494928 SMARCA4P51532 1647 aa14.13□□□□□ -0.15
PHF8-218ENST00000494928 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
PHF8-218ENST00000494928 PEG3Q9GZU2 1588 aa14.05□□□□□ -0.16
PHF8-218ENST00000494928 BAZ1AQ9NRL2 1556 aaPredicted RBP14.05□□□□□ -0.16
PHF8-218ENST00000494928 PDS5BQ9NTI5 1447 aa14.02□□□□□ -0.16
PHF8-218ENST00000494928 WDR62O43379 1518 aa14□□□□□ -0.17
PHF8-218ENST00000494928 MRC2Q9UBG0 1479 aa13.96□□□□□ -0.17
PHF8-218ENST00000494928 RIMBP3CA6NJZ7 1639 aa13.86□□□□□ -0.19
PHF8-218ENST00000494928 RIMBP3BA6NNM3 1639 aa13.86□□□□□ -0.19
PHF8-218ENST00000494928 RIMBP3Q9UFD9 1639 aa13.86□□□□□ -0.19
PHF8-218ENST00000494928 CADPSQ9ULU8 1353 aa13.84□□□□□ -0.19
PHF8-218ENST00000494928 OSCARQ8IYS5 282 aa13.84□□□□□ -0.19
PHF8-218ENST00000494928 CEP164Q9UPV0 1460 aa13.8□□□□□ -0.2
PHF8-218ENST00000494928 MROH2BQ7Z745 1585 aa13.77□□□□□ -0.21
PHF8-218ENST00000494928 ARHGEF11O15085 1522 aa13.74□□□□□ -0.21
PHF8-218ENST00000494928 FANCD2Q9BXW9 1451 aa13.71□□□□□ -0.21
PHF8-218ENST00000494928 URB2Q14146 1524 aaKnown RBP13.64□□□□□ -0.23
PHF8-218ENST00000494928 CFTRP13569 1480 aa13.62□□□□□ -0.23
PHF8-218ENST00000494928 PRDM2Q13029 1718 aa13.62□□□□□ -0.23
PHF8-218ENST00000494928 WIZO95785 1651 aa13.61□□□□□ -0.23
PHF8-218ENST00000494928 ARAP1Q96P48 1450 aa13.55□□□□□ -0.24
PHF8-218ENST00000494928 CHD1O14646 1710 aa13.55□□□□□ -0.24
PHF8-218ENST00000494928 IFT140Q96RY7 1462 aa13.54□□□□□ -0.24
PHF8-218ENST00000494928 ZNF608Q9ULD9 1512 aaPredicted RBP13.54□□□□□ -0.24
PHF8-218ENST00000494928 EIF4G3O43432 1585 aaKnown RBP13.53□□□□□ -0.24
PHF8-218ENST00000494928 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
PHF8-218ENST00000494928 CYB5RLQ6IPT4 315 aa13.51□□□□□ -0.25
PHF8-218ENST00000494928 RSF1Q96T23 1441 aaPredicted RBP13.49□□□□□ -0.25
PHF8-218ENST00000494928 TOP2AP11388 1531 aaKnown RBP13.43□□□□□ -0.26
PHF8-218ENST00000494928 TOPBP1Q92547 1522 aa13.41□□□□□ -0.26
PHF8-218ENST00000494928 TARBP1Q13395 1621 aaKnown RBP13.39□□□□□ -0.27
PHF8-218ENST00000494928 ABCC8Q09428 1581 aa13.37□□□□□ -0.27
PHF8-218ENST00000494928 DNMBPQ6XZF7 1577 aa13.36□□□□□ -0.27
PHF8-218ENST00000494928 CLASP1Q7Z460 1538 aa13.35□□□□□ -0.27
PHF8-218ENST00000494928 AQRO60306 1485 aaKnown RBP eCLIP13.3□□□□□ -0.28
PHF8-218ENST00000494928 SYNJ1O43426 1573 aa13.28□□□□□ -0.28
PHF8-218ENST00000494928 WDR97A6NE52 1622 aa13.28□□□□□ -0.28
PHF8-218ENST00000494928 POLA1P09884 1462 aaPredicted RBP13.23□□□□□ -0.29
PHF8-218ENST00000494928 FBLN2P98095 1184 aa13.22□□□□□ -0.29
PHF8-218ENST00000494928 SNAPC4Q5SXM2 1469 aa13.21□□□□□ -0.3
PHF8-218ENST00000494928 CCDC88BA6NC98 1476 aa13.2□□□□□ -0.3
PHF8-218ENST00000494928 MAGI1Q96QZ7 1491 aaPredicted RBP13.2□□□□□ -0.3
PHF8-218ENST00000494928 GAPVD1Q14C86 1478 aa13.18□□□□□ -0.3
PHF8-218ENST00000494928 KIF13AQ9H1H9 1805 aa13.16□□□□□ -0.3
PHF8-218ENST00000494928 SYNJ2O15056 1496 aa13.14□□□□□ -0.31
PHF8-218ENST00000494928 RAD54L2Q9Y4B4 1467 aa13.14□□□□□ -0.31
PHF8-218ENST00000494928 PBRM1Q86U86 1689 aa13.12□□□□□ -0.31
PHF8-218ENST00000494928 TDRD9Q8NDG6 1382 aaKnown RBP13.12□□□□□ -0.31
PHF8-218ENST00000494928 GRIN2BQ13224 1484 aa13.1□□□□□ -0.31
PHF8-218ENST00000494928 SOGA1O94964 1423 aa13.1□□□□□ -0.31
PHF8-218ENST00000494928 CHMP7Q8WUX9 453 aaPredicted RBP13.09□□□□□ -0.31
PHF8-218ENST00000494928 FGD5Q6ZNL6 1462 aa13.07□□□□□ -0.32
PHF8-218ENST00000494928 ERCC6L2Q5T890 1561 aa13.04□□□□□ -0.32
PHF8-218ENST00000494928 ILDR1Q86SU0 546 aaPredicted RBP13.03□□□□□ -0.32
PHF8-218ENST00000494928 SHROOM2Q13796 1616 aa13.01□□□□□ -0.33
PHF8-218ENST00000494928 ABCA5Q8WWZ7 1642 aa13.01□□□□□ -0.33
PHF8-218ENST00000494928 CEP170Q5SW79 1584 aa13□□□□□ -0.33
PHF8-218ENST00000494928 CUX1P39880 1505 aa12.98□□□□□ -0.33
PHF8-218ENST00000494928 SENP3Q9H4L4 574 aaPredicted RBP12.95□□□□□ -0.34
PHF8-218ENST00000494928 GRIN2AQ12879 1464 aa12.95□□□□□ -0.34
PHF8-218ENST00000494928 NUP160Q12769 1436 aa12.94□□□□□ -0.34
PHF8-218ENST00000494928 ADAMTS12P58397 1594 aa12.94□□□□□ -0.34
PHF8-218ENST00000494928 KDM6BO15054 1643 aa12.92□□□□□ -0.34
PHF8-218ENST00000494928 DIP2BQ9P265 1576 aa12.92□□□□□ -0.34
PHF8-218ENST00000494928 ABCA10Q8WWZ4 1543 aa12.92□□□□□ -0.34
PHF8-218ENST00000494928 MAPKBP1O60336 1514 aa12.91□□□□□ -0.34
PHF8-218ENST00000494928 ABCC10Q5T3U5 1492 aa12.91□□□□□ -0.34
PHF8-218ENST00000494928 KDM4FA0A1W2PPD8 638 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms