RNA–Protein interactions for RNA: ENST00000494833.1

BRD1-208, Transcript of bromodomain containing 1, humanhuman

TSL 4

Gene BRD1, Length 409 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1-208ENST00000494833 NISCHQ9Y2I1 1504 aa25.55■■□□□ 1.68
BRD1-208ENST00000494833 CCDC180Q9P1Z9 1646 aa22.58■■□□□ 1.21
BRD1-208ENST00000494833 ABCC9O60706 1549 aa21.56■■□□□ 1.04
BRD1-208ENST00000494833 ZCCHC6Q5VYS8 1495 aaKnown RBP21.4■■□□□ 1.02
BRD1-208ENST00000494833 DCAF8L2P0C7V8 631 aa21.22■□□□□ 0.99
BRD1-208ENST00000494833 DCAF1Q9Y4B6 1507 aa21.2■□□□□ 0.98
BRD1-208ENST00000494833 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
BRD1-208ENST00000494833 NACADO15069 1562 aa21.11■□□□□ 0.97
BRD1-208ENST00000494833 RB1CC1Q8TDY2 1594 aa21.04■□□□□ 0.96
BRD1-208ENST00000494833 SCRIBQ14160 1630 aa20.61■□□□□ 0.89
BRD1-208ENST00000494833 SHROOM4Q9ULL8 1493 aa20.49■□□□□ 0.87
BRD1-208ENST00000494833 UNC13AQ9UPW8 1703 aa20.44■□□□□ 0.86
BRD1-208ENST00000494833 BICRAQ9NZM4 1560 aa20.23■□□□□ 0.83
BRD1-208ENST00000494833 PABPN1Q86U42 306 aaKnown RBP eCLIP20.19■□□□□ 0.82
BRD1-208ENST00000494833 BAZ1AQ9NRL2 1556 aaPredicted RBP19.84■□□□□ 0.77
BRD1-208ENST00000494833 CECR2Q9BXF3 1484 aa19.78■□□□□ 0.76
BRD1-208ENST00000494833 SMARCA4P51532 1647 aa19.75■□□□□ 0.75
BRD1-208ENST00000494833 EIF4G1Q04637 1599 aaKnown RBP19.74■□□□□ 0.75
BRD1-208ENST00000494833 MROH2BQ7Z745 1585 aa19.66■□□□□ 0.74
BRD1-208ENST00000494833 RSF1Q96T23 1441 aaPredicted RBP19.62■□□□□ 0.73
BRD1-208ENST00000494833 SMARCA2P51531 1590 aa19.58■□□□□ 0.73
BRD1-208ENST00000494833 SUPT5HO00267 1087 aaKnown RBP19.55■□□□□ 0.72
BRD1-208ENST00000494833 PEG3Q9GZU2 1588 aa19.53■□□□□ 0.72
BRD1-208ENST00000494833 CC2D2AQ9P2K1 1620 aa19.53■□□□□ 0.72
BRD1-208ENST00000494833 WIZO95785 1651 aa19.5■□□□□ 0.71
BRD1-208ENST00000494833 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
BRD1-208ENST00000494833 BAZ1BQ9UIG0 1483 aaKnown RBP19.43■□□□□ 0.7
BRD1-208ENST00000494833 HMGXB3Q12766 1538 aa19.41■□□□□ 0.7
BRD1-208ENST00000494833 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
BRD1-208ENST00000494833 TOP2AP11388 1531 aaKnown RBP19.38■□□□□ 0.69
BRD1-208ENST00000494833 DNAJC5BQ9UF47 199 aa19.17■□□□□ 0.66
BRD1-208ENST00000494833 CCDC88BA6NC98 1476 aa19.09■□□□□ 0.65
BRD1-208ENST00000494833 LAMC3Q9Y6N6 1575 aa18.89■□□□□ 0.62
BRD1-208ENST00000494833 CADPSQ9ULU8 1353 aa18.89■□□□□ 0.61
BRD1-208ENST00000494833 CFTRP13569 1480 aa18.87■□□□□ 0.61
BRD1-208ENST00000494833 PRDM2Q13029 1718 aa18.84■□□□□ 0.61
BRD1-208ENST00000494833 PDS5BQ9NTI5 1447 aa18.77■□□□□ 0.6
BRD1-208ENST00000494833 NESP48681 1621 aa18.74■□□□□ 0.59
BRD1-208ENST00000494833 FANCD2Q9BXW9 1451 aa18.7■□□□□ 0.58
BRD1-208ENST00000494833 CEP164Q9UPV0 1460 aa18.67■□□□□ 0.58
BRD1-208ENST00000494833 ERCC6Q03468 1493 aa18.66■□□□□ 0.58
BRD1-208ENST00000494833 KIF21AQ7Z4S6 1674 aa18.6■□□□□ 0.57
BRD1-208ENST00000494833 WRNQ14191 1432 aaPredicted RBP eCLIP18.57■□□□□ 0.56
BRD1-208ENST00000494833 ABCC8Q09428 1581 aa18.55■□□□□ 0.56
BRD1-208ENST00000494833 MRC2Q9UBG0 1479 aa18.52■□□□□ 0.55
BRD1-208ENST00000494833 TRIM41Q8WV44 630 aa18.49■□□□□ 0.55
BRD1-208ENST00000494833 DNMBPQ6XZF7 1577 aa18.49■□□□□ 0.55
BRD1-208ENST00000494833 TOP2BQ02880 1626 aa18.46■□□□□ 0.55
BRD1-208ENST00000494833 CHIC1Q5VXU3 224 aa18.46■□□□□ 0.55
BRD1-208ENST00000494833 BIVM-ERCC5R4GMW8 1640 aa18.45■□□□□ 0.54
BRD1-208ENST00000494833 CUX1P39880 1505 aa18.44■□□□□ 0.54
BRD1-208ENST00000494833 SYNJ1O43426 1573 aa18.43■□□□□ 0.54
BRD1-208ENST00000494833 TOPBP1Q92547 1522 aa18.43■□□□□ 0.54
BRD1-208ENST00000494833 URB2Q14146 1524 aaKnown RBP18.42■□□□□ 0.54
BRD1-208ENST00000494833 WDR62O43379 1518 aa18.41■□□□□ 0.54
BRD1-208ENST00000494833 THOC2Q8NI27 1593 aaKnown RBP18.41■□□□□ 0.54
BRD1-208ENST00000494833 FGD5Q6ZNL6 1462 aa18.34■□□□□ 0.53
BRD1-208ENST00000494833 POLA1P09884 1462 aaPredicted RBP18.3■□□□□ 0.52
BRD1-208ENST00000494833 SOGA1O94964 1423 aa18.25■□□□□ 0.51
BRD1-208ENST00000494833 CUX2O14529 1486 aa18.25■□□□□ 0.51
BRD1-208ENST00000494833 IFT140Q96RY7 1462 aa18.24■□□□□ 0.51
BRD1-208ENST00000494833 EEA1Q15075 1411 aa18.19■□□□□ 0.5
BRD1-208ENST00000494833 ABCA10Q8WWZ4 1543 aa18.18■□□□□ 0.5
BRD1-208ENST00000494833 KIF27Q86VH2 1401 aa18.18■□□□□ 0.5
BRD1-208ENST00000494833 RAD54L2Q9Y4B4 1467 aa18.18■□□□□ 0.5
BRD1-208ENST00000494833 WDR97A6NE52 1622 aa18.17■□□□□ 0.5
BRD1-208ENST00000494833 TARBP1Q13395 1621 aaKnown RBP18.16■□□□□ 0.5
BRD1-208ENST00000494833 ABCA5Q8WWZ7 1642 aa18.07■□□□□ 0.48
BRD1-208ENST00000494833 GAPVD1Q14C86 1478 aa18.07■□□□□ 0.48
BRD1-208ENST00000494833 TDRD9Q8NDG6 1382 aaKnown RBP18.05■□□□□ 0.48
BRD1-208ENST00000494833 EIF4G3O43432 1585 aaKnown RBP18.05■□□□□ 0.48
BRD1-208ENST00000494833 FAM9AQ8IZU1 332 aaPredicted RBP18.05■□□□□ 0.48
BRD1-208ENST00000494833 ERICH3Q5RHP9 1530 aa18.02■□□□□ 0.47
BRD1-208ENST00000494833 ZNF608Q9ULD9 1512 aaPredicted RBP18.02■□□□□ 0.47
BRD1-208ENST00000494833 GRIN2BQ13224 1484 aa18.01■□□□□ 0.47
BRD1-208ENST00000494833 PBRM1Q86U86 1689 aa18.01■□□□□ 0.47
BRD1-208ENST00000494833 CSRNP3Q8WYN3 585 aa18■□□□□ 0.47
BRD1-208ENST00000494833 AQRO60306 1485 aaKnown RBP eCLIP18■□□□□ 0.47
BRD1-208ENST00000494833 RUSC2Q8N2Y8 1516 aa17.99■□□□□ 0.47
BRD1-208ENST00000494833 CUL7Q14999 1698 aa17.99■□□□□ 0.47
BRD1-208ENST00000494833 MAGI1Q96QZ7 1491 aaPredicted RBP17.93■□□□□ 0.46
BRD1-208ENST00000494833 IGF1RP08069 1367 aa17.92■□□□□ 0.46
BRD1-208ENST00000494833 KIF21BO75037 1637 aa17.9■□□□□ 0.46
BRD1-208ENST00000494833 SNAPC4Q5SXM2 1469 aa17.9■□□□□ 0.46
BRD1-208ENST00000494833 CARMIL1Q5VZK9 1371 aa17.9■□□□□ 0.46
BRD1-208ENST00000494833 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.45
BRD1-208ENST00000494833 ADAMTS12P58397 1594 aa17.88■□□□□ 0.45
BRD1-208ENST00000494833 GOLGA3Q08378 1498 aa17.88■□□□□ 0.45
BRD1-208ENST00000494833 RAPGEF2Q9Y4G8 1499 aa17.87■□□□□ 0.45
BRD1-208ENST00000494833 PRXQ9BXM0 1461 aa17.86■□□□□ 0.45
BRD1-208ENST00000494833 SYNJ2O15056 1496 aa17.83■□□□□ 0.45
BRD1-208ENST00000494833 CHMP7Q8WUX9 453 aaPredicted RBP17.81■□□□□ 0.44
BRD1-208ENST00000494833 UBTFP17480 764 aaKnown RBP17.78■□□□□ 0.44
BRD1-208ENST00000494833 FBLN2P98095 1184 aa17.78■□□□□ 0.44
BRD1-208ENST00000494833 EHMT2Q96KQ7 1210 aa17.77■□□□□ 0.44
BRD1-208ENST00000494833 GRIN2AQ12879 1464 aa17.76■□□□□ 0.43
BRD1-208ENST00000494833 CHD1O14646 1710 aa17.72■□□□□ 0.43
BRD1-208ENST00000494833 CTTNBP2Q8WZ74 1663 aa17.7■□□□□ 0.42
BRD1-208ENST00000494833 TNIKQ9UKE5 1360 aa17.68■□□□□ 0.42
BRD1-208ENST00000494833 LOC105371045A0A1W2PR82 267 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms