RNA–Protein interactions for RNA: ENST00000494785.5

MKLN1-209, Transcript of muskelin 1, humanhuman

TSL 1 (best)

Gene MKLN1, Length 2,386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKLN1-209ENST00000494785 NISCHQ9Y2I1 1504 aa26.05■■□□□ 1.76
MKLN1-209ENST00000494785 CCDC180Q9P1Z9 1646 aa22.94■■□□□ 1.26
MKLN1-209ENST00000494785 ABCC9O60706 1549 aa21.87■■□□□ 1.09
MKLN1-209ENST00000494785 ZCCHC6Q5VYS8 1495 aaKnown RBP21.83■■□□□ 1.09
MKLN1-209ENST00000494785 DCAF1Q9Y4B6 1507 aa21.61■■□□□ 1.05
MKLN1-209ENST00000494785 MYO15BQ96JP2 1530 aa21.51■■□□□ 1.03
MKLN1-209ENST00000494785 DCAF8L2P0C7V8 631 aa21.5■■□□□ 1.03
MKLN1-209ENST00000494785 NACADO15069 1562 aa21.43■■□□□ 1.02
MKLN1-209ENST00000494785 RB1CC1Q8TDY2 1594 aa21.31■■□□□ 1
MKLN1-209ENST00000494785 SCRIBQ14160 1630 aa20.94■□□□□ 0.94
MKLN1-209ENST00000494785 SHROOM4Q9ULL8 1493 aa20.87■□□□□ 0.93
MKLN1-209ENST00000494785 UNC13AQ9UPW8 1703 aa20.83■□□□□ 0.92
MKLN1-209ENST00000494785 BICRAQ9NZM4 1560 aa20.63■□□□□ 0.89
MKLN1-209ENST00000494785 PABPN1Q86U42 306 aaKnown RBP eCLIP20.52■□□□□ 0.88
MKLN1-209ENST00000494785 CECR2Q9BXF3 1484 aa20.21■□□□□ 0.83
MKLN1-209ENST00000494785 BAZ1AQ9NRL2 1556 aaPredicted RBP20.17■□□□□ 0.82
MKLN1-209ENST00000494785 SMARCA4P51532 1647 aa20.1■□□□□ 0.81
MKLN1-209ENST00000494785 MROH2BQ7Z745 1585 aa20.08■□□□□ 0.8
MKLN1-209ENST00000494785 RSF1Q96T23 1441 aaPredicted RBP20.06■□□□□ 0.8
MKLN1-209ENST00000494785 EIF4G1Q04637 1599 aaKnown RBP20.06■□□□□ 0.8
MKLN1-209ENST00000494785 SUPT5HO00267 1087 aaKnown RBP19.93■□□□□ 0.78
MKLN1-209ENST00000494785 PEG3Q9GZU2 1588 aa19.92■□□□□ 0.78
MKLN1-209ENST00000494785 WIZO95785 1651 aa19.88■□□□□ 0.77
MKLN1-209ENST00000494785 SMARCA2P51531 1590 aa19.87■□□□□ 0.77
MKLN1-209ENST00000494785 ATAD2BQ9ULI0 1458 aa19.85■□□□□ 0.77
MKLN1-209ENST00000494785 CC2D2AQ9P2K1 1620 aa19.83■□□□□ 0.76
MKLN1-209ENST00000494785 NCAPD3P42695 1498 aa19.76■□□□□ 0.75
MKLN1-209ENST00000494785 HMGXB3Q12766 1538 aa19.73■□□□□ 0.75
MKLN1-209ENST00000494785 TOP2AP11388 1531 aaKnown RBP19.73■□□□□ 0.75
MKLN1-209ENST00000494785 BAZ1BQ9UIG0 1483 aaKnown RBP19.72■□□□□ 0.75
MKLN1-209ENST00000494785 DNAJC5BQ9UF47 199 aa19.55■□□□□ 0.72
MKLN1-209ENST00000494785 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
MKLN1-209ENST00000494785 CFTRP13569 1480 aa19.23■□□□□ 0.67
MKLN1-209ENST00000494785 CADPSQ9ULU8 1353 aa19.22■□□□□ 0.67
MKLN1-209ENST00000494785 LAMC3Q9Y6N6 1575 aa19.16■□□□□ 0.66
MKLN1-209ENST00000494785 PRDM2Q13029 1718 aa19.13■□□□□ 0.65
MKLN1-209ENST00000494785 NESP48681 1621 aa19.09■□□□□ 0.65
MKLN1-209ENST00000494785 PDS5BQ9NTI5 1447 aa19.01■□□□□ 0.63
MKLN1-209ENST00000494785 FANCD2Q9BXW9 1451 aa18.99■□□□□ 0.63
MKLN1-209ENST00000494785 CHIC1Q5VXU3 224 aa18.94■□□□□ 0.62
MKLN1-209ENST00000494785 ABCC8Q09428 1581 aa18.93■□□□□ 0.62
MKLN1-209ENST00000494785 CEP164Q9UPV0 1460 aa18.92■□□□□ 0.62
MKLN1-209ENST00000494785 WRNQ14191 1432 aaPredicted RBP eCLIP18.9■□□□□ 0.62
MKLN1-209ENST00000494785 KIF21AQ7Z4S6 1674 aa18.9■□□□□ 0.62
MKLN1-209ENST00000494785 ERCC6Q03468 1493 aa18.83■□□□□ 0.6
MKLN1-209ENST00000494785 TRIM41Q8WV44 630 aa18.82■□□□□ 0.6
MKLN1-209ENST00000494785 SYNJ1O43426 1573 aa18.81■□□□□ 0.6
MKLN1-209ENST00000494785 TOP2BQ02880 1626 aa18.81■□□□□ 0.6
MKLN1-209ENST00000494785 CUX1P39880 1505 aa18.81■□□□□ 0.6
MKLN1-209ENST00000494785 BIVM-ERCC5R4GMW8 1640 aa18.79■□□□□ 0.6
MKLN1-209ENST00000494785 DNMBPQ6XZF7 1577 aa18.78■□□□□ 0.6
MKLN1-209ENST00000494785 MRC2Q9UBG0 1479 aa18.77■□□□□ 0.6
MKLN1-209ENST00000494785 URB2Q14146 1524 aaKnown RBP18.76■□□□□ 0.59
MKLN1-209ENST00000494785 TOPBP1Q92547 1522 aa18.75■□□□□ 0.59
MKLN1-209ENST00000494785 WDR62O43379 1518 aa18.7■□□□□ 0.58
MKLN1-209ENST00000494785 THOC2Q8NI27 1593 aaKnown RBP18.7■□□□□ 0.58
MKLN1-209ENST00000494785 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
MKLN1-209ENST00000494785 POLA1P09884 1462 aaPredicted RBP18.63■□□□□ 0.57
MKLN1-209ENST00000494785 SOGA1O94964 1423 aa18.55■□□□□ 0.56
MKLN1-209ENST00000494785 CUX2O14529 1486 aa18.53■□□□□ 0.56
MKLN1-209ENST00000494785 ABCA10Q8WWZ4 1543 aa18.52■□□□□ 0.56
MKLN1-209ENST00000494785 RAD54L2Q9Y4B4 1467 aa18.52■□□□□ 0.55
MKLN1-209ENST00000494785 TARBP1Q13395 1621 aaKnown RBP18.5■□□□□ 0.55
MKLN1-209ENST00000494785 EEA1Q15075 1411 aa18.5■□□□□ 0.55
MKLN1-209ENST00000494785 IFT140Q96RY7 1462 aa18.5■□□□□ 0.55
MKLN1-209ENST00000494785 WDR97A6NE52 1622 aa18.49■□□□□ 0.55
MKLN1-209ENST00000494785 KIF27Q86VH2 1401 aa18.47■□□□□ 0.55
MKLN1-209ENST00000494785 RUSC2Q8N2Y8 1516 aa18.43■□□□□ 0.54
MKLN1-209ENST00000494785 ABCA5Q8WWZ7 1642 aa18.39■□□□□ 0.54
MKLN1-209ENST00000494785 FAM9AQ8IZU1 332 aaPredicted RBP18.38■□□□□ 0.53
MKLN1-209ENST00000494785 TDRD9Q8NDG6 1382 aaKnown RBP18.37■□□□□ 0.53
MKLN1-209ENST00000494785 GAPVD1Q14C86 1478 aa18.36■□□□□ 0.53
MKLN1-209ENST00000494785 CSRNP3Q8WYN3 585 aa18.35■□□□□ 0.53
MKLN1-209ENST00000494785 ZNF608Q9ULD9 1512 aaPredicted RBP18.35■□□□□ 0.53
MKLN1-209ENST00000494785 EIF4G3O43432 1585 aaKnown RBP18.32■□□□□ 0.52
MKLN1-209ENST00000494785 ERICH3Q5RHP9 1530 aa18.31■□□□□ 0.52
MKLN1-209ENST00000494785 AQRO60306 1485 aaKnown RBP eCLIP18.31■□□□□ 0.523e-6■■■■□ 24.7
MKLN1-209ENST00000494785 IGF1RP08069 1367 aa18.31■□□□□ 0.52
MKLN1-209ENST00000494785 GRIN2BQ13224 1484 aa18.28■□□□□ 0.52
MKLN1-209ENST00000494785 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
MKLN1-209ENST00000494785 PRXQ9BXM0 1461 aa18.26■□□□□ 0.51
MKLN1-209ENST00000494785 CUL7Q14999 1698 aa18.25■□□□□ 0.51
MKLN1-209ENST00000494785 KIF21BO75037 1637 aa18.25■□□□□ 0.51
MKLN1-209ENST00000494785 CARMIL1Q5VZK9 1371 aa18.21■□□□□ 0.51
MKLN1-209ENST00000494785 GOLGA3Q08378 1498 aa18.19■□□□□ 0.5
MKLN1-209ENST00000494785 MAGI1Q96QZ7 1491 aaPredicted RBP18.19■□□□□ 0.5
MKLN1-209ENST00000494785 RAPGEF2Q9Y4G8 1499 aa18.18■□□□□ 0.5
MKLN1-209ENST00000494785 FHAD1B1AJZ9 1412 aa18.17■□□□□ 0.5
MKLN1-209ENST00000494785 ADAMTS12P58397 1594 aa18.17■□□□□ 0.5
MKLN1-209ENST00000494785 SNAPC4Q5SXM2 1469 aa18.17■□□□□ 0.5
MKLN1-209ENST00000494785 LOC105371045A0A1W2PR82 267 aa18.14■□□□□ 0.49
MKLN1-209ENST00000494785 SYNJ2O15056 1496 aa18.1■□□□□ 0.49
MKLN1-209ENST00000494785 EHMT2Q96KQ7 1210 aa18.08■□□□□ 0.48
MKLN1-209ENST00000494785 UBTFP17480 764 aaKnown RBP18.06■□□□□ 0.48
MKLN1-209ENST00000494785 TNIKQ9UKE5 1360 aa18.06■□□□□ 0.48
MKLN1-209ENST00000494785 GRIN2AQ12879 1464 aa18.05■□□□□ 0.48
MKLN1-209ENST00000494785 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
MKLN1-209ENST00000494785 CTTNBP2Q8WZ74 1663 aa17.98■□□□□ 0.47
MKLN1-209ENST00000494785 FBLN2P98095 1184 aa17.97■□□□□ 0.47
MKLN1-209ENST00000494785 CHD1O14646 1710 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms