RNA–Protein interactions for RNA: ENST00000494691.5

KRT23-205, Transcript of keratin 23, humanhuman

TSL 5

Gene KRT23, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT23-205ENST00000494691 NISCHQ9Y2I1 1504 aa25.65■■□□□ 1.7
KRT23-205ENST00000494691 ABCC9O60706 1549 aa24.21■■□□□ 1.47
KRT23-205ENST00000494691 DNAJC5BQ9UF47 199 aa23.39■■□□□ 1.33
KRT23-205ENST00000494691 CCDC180Q9P1Z9 1646 aa23.34■■□□□ 1.33
KRT23-205ENST00000494691 RB1CC1Q8TDY2 1594 aa22.63■■□□□ 1.21
KRT23-205ENST00000494691 PABPN1Q86U42 306 aaKnown RBP eCLIP22.43■■□□□ 1.18
KRT23-205ENST00000494691 NACADO15069 1562 aa22.27■■□□□ 1.16
KRT23-205ENST00000494691 DCAF8L2P0C7V8 631 aa22.11■■□□□ 1.13
KRT23-205ENST00000494691 UNC13AQ9UPW8 1703 aa22.09■■□□□ 1.13
KRT23-205ENST00000494691 DNAJC5Q9H3Z4 198 aa22.05■■□□□ 1.12
KRT23-205ENST00000494691 BICRAQ9NZM4 1560 aa21.99■■□□□ 1.11
KRT23-205ENST00000494691 CECR2Q9BXF3 1484 aa21.88■■□□□ 1.09
KRT23-205ENST00000494691 CC2D2AQ9P2K1 1620 aa21.8■■□□□ 1.08
KRT23-205ENST00000494691 MYO15BQ96JP2 1530 aa21.65■■□□□ 1.06
KRT23-205ENST00000494691 SHROOM4Q9ULL8 1493 aa21.58■■□□□ 1.05
KRT23-205ENST00000494691 EIF4G1Q04637 1599 aaKnown RBP21.55■■□□□ 1.04
KRT23-205ENST00000494691 SCRIBQ14160 1630 aa21.3■■□□□ 1
KRT23-205ENST00000494691 CUX2O14529 1486 aa21.14■□□□□ 0.98
KRT23-205ENST00000494691 DCAF1Q9Y4B6 1507 aa21.09■□□□□ 0.97
KRT23-205ENST00000494691 ZCCHC6Q5VYS8 1495 aaKnown RBP21.09■□□□□ 0.97
KRT23-205ENST00000494691 ERCC6Q03468 1493 aa20.98■□□□□ 0.95
KRT23-205ENST00000494691 TRIM41Q8WV44 630 aa20.85■□□□□ 0.93
KRT23-205ENST00000494691 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
KRT23-205ENST00000494691 NESP48681 1621 aa20.56■□□□□ 0.88
KRT23-205ENST00000494691 THOC2Q8NI27 1593 aaKnown RBP20.48■□□□□ 0.87
KRT23-205ENST00000494691 ATAD2BQ9ULI0 1458 aa20.42■□□□□ 0.86
KRT23-205ENST00000494691 SMARCA2P51531 1590 aa20.36■□□□□ 0.85
KRT23-205ENST00000494691 HMGXB3Q12766 1538 aa20.35■□□□□ 0.85
KRT23-205ENST00000494691 KIF21AQ7Z4S6 1674 aa20.24■□□□□ 0.83
KRT23-205ENST00000494691 LAMC3Q9Y6N6 1575 aa20.24■□□□□ 0.83
KRT23-205ENST00000494691 BAZ1BQ9UIG0 1483 aaKnown RBP20.2■□□□□ 0.82
KRT23-205ENST00000494691 SMARCA4P51532 1647 aa20.2■□□□□ 0.82
KRT23-205ENST00000494691 PDS5BQ9NTI5 1447 aa20.18■□□□□ 0.82
KRT23-205ENST00000494691 BAZ1AQ9NRL2 1556 aaPredicted RBP20.13■□□□□ 0.81
KRT23-205ENST00000494691 OSCARQ8IYS5 282 aa20.07■□□□□ 0.8
KRT23-205ENST00000494691 MRC2Q9UBG0 1479 aa20.05■□□□□ 0.8
KRT23-205ENST00000494691 WDR62O43379 1518 aa20.02■□□□□ 0.8
KRT23-205ENST00000494691 PEG3Q9GZU2 1588 aa19.96■□□□□ 0.79
KRT23-205ENST00000494691 CADPSQ9ULU8 1353 aa19.93■□□□□ 0.78
KRT23-205ENST00000494691 RIMBP3CA6NJZ7 1639 aa19.89■□□□□ 0.77
KRT23-205ENST00000494691 RIMBP3BA6NNM3 1639 aa19.89■□□□□ 0.77
KRT23-205ENST00000494691 RIMBP3Q9UFD9 1639 aa19.89■□□□□ 0.77
KRT23-205ENST00000494691 CEP164Q9UPV0 1460 aa19.83■□□□□ 0.76
KRT23-205ENST00000494691 AEBP2Q6ZN18 517 aaPredicted RBP19.78■□□□□ 0.76
KRT23-205ENST00000494691 MROH2BQ7Z745 1585 aa19.78■□□□□ 0.76
KRT23-205ENST00000494691 TRHP20396 242 aaPredicted RBP19.77■□□□□ 0.76
KRT23-205ENST00000494691 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
KRT23-205ENST00000494691 FANCD2Q9BXW9 1451 aa19.73■□□□□ 0.75
KRT23-205ENST00000494691 CYB5RLQ6IPT4 315 aa19.69■□□□□ 0.74
KRT23-205ENST00000494691 URB2Q14146 1524 aaKnown RBP19.61■□□□□ 0.73
KRT23-205ENST00000494691 CFTRP13569 1480 aa19.53■□□□□ 0.72
KRT23-205ENST00000494691 ZNF608Q9ULD9 1512 aaPredicted RBP19.51■□□□□ 0.71
KRT23-205ENST00000494691 ARAP1Q96P48 1450 aa19.51■□□□□ 0.71
KRT23-205ENST00000494691 WIZO95785 1651 aa19.5■□□□□ 0.71
KRT23-205ENST00000494691 IFT140Q96RY7 1462 aa19.44■□□□□ 0.7
KRT23-205ENST00000494691 EIF4G3O43432 1585 aaKnown RBP19.36■□□□□ 0.69
KRT23-205ENST00000494691 CHD1O14646 1710 aa19.35■□□□□ 0.69
KRT23-205ENST00000494691 RSF1Q96T23 1441 aaPredicted RBP19.34■□□□□ 0.69
KRT23-205ENST00000494691 FBLN2P98095 1184 aa19.32■□□□□ 0.68
KRT23-205ENST00000494691 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
KRT23-205ENST00000494691 AQRO60306 1485 aaKnown RBP eCLIP19.24■□□□□ 0.67
KRT23-205ENST00000494691 PRDM2Q13029 1718 aa19.22■□□□□ 0.67
KRT23-205ENST00000494691 TOP2AP11388 1531 aaKnown RBP19.19■□□□□ 0.66
KRT23-205ENST00000494691 TARBP1Q13395 1621 aaKnown RBP19.12■□□□□ 0.65
KRT23-205ENST00000494691 ABCC8Q09428 1581 aa19.12■□□□□ 0.65
KRT23-205ENST00000494691 DNMBPQ6XZF7 1577 aa19.1■□□□□ 0.65
KRT23-205ENST00000494691 CLASP1Q7Z460 1538 aa19.1■□□□□ 0.65
KRT23-205ENST00000494691 SYNJ1O43426 1573 aa19.03■□□□□ 0.64
KRT23-205ENST00000494691 SNAPC4Q5SXM2 1469 aa19.03■□□□□ 0.64
KRT23-205ENST00000494691 ILDR1Q86SU0 546 aaPredicted RBP19.02■□□□□ 0.64
KRT23-205ENST00000494691 CHMP7Q8WUX9 453 aaPredicted RBP19.01■□□□□ 0.63
KRT23-205ENST00000494691 POLA1P09884 1462 aaPredicted RBP19.01■□□□□ 0.63
KRT23-205ENST00000494691 TDRD9Q8NDG6 1382 aaKnown RBP19■□□□□ 0.63
KRT23-205ENST00000494691 CCDC88BA6NC98 1476 aa18.99■□□□□ 0.63
KRT23-205ENST00000494691 GAPVD1Q14C86 1478 aa18.99■□□□□ 0.63
KRT23-205ENST00000494691 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
KRT23-205ENST00000494691 SOGA1O94964 1423 aa18.91■□□□□ 0.62
KRT23-205ENST00000494691 MAGI1Q96QZ7 1491 aaPredicted RBP18.9■□□□□ 0.62
KRT23-205ENST00000494691 SYNJ2O15056 1496 aa18.87■□□□□ 0.61
KRT23-205ENST00000494691 WDR97A6NE52 1622 aa18.84■□□□□ 0.61
KRT23-205ENST00000494691 GRIN2BQ13224 1484 aa18.84■□□□□ 0.61
KRT23-205ENST00000494691 FGD5Q6ZNL6 1462 aa18.78■□□□□ 0.6
KRT23-205ENST00000494691 ERCC6L2Q5T890 1561 aa18.77■□□□□ 0.6
KRT23-205ENST00000494691 KDM4FA0A1W2PPD8 638 aa18.74■□□□□ 0.59
KRT23-205ENST00000494691 KIF13AQ9H1H9 1805 aa18.74■□□□□ 0.59
KRT23-205ENST00000494691 PBRM1Q86U86 1689 aa18.69■□□□□ 0.58
KRT23-205ENST00000494691 CEP170Q5SW79 1584 aa18.65■□□□□ 0.58
KRT23-205ENST00000494691 SUPT5HO00267 1087 aaKnown RBP18.64■□□□□ 0.57
KRT23-205ENST00000494691 FAM69CQ0P6D2 419 aa18.63■□□□□ 0.57
KRT23-205ENST00000494691 CUX1P39880 1505 aa18.63■□□□□ 0.57
KRT23-205ENST00000494691 GRIN2AQ12879 1464 aa18.59■□□□□ 0.57
KRT23-205ENST00000494691 KDM6BO15054 1643 aa18.57■□□□□ 0.56
KRT23-205ENST00000494691 ABCC10Q5T3U5 1492 aa18.56■□□□□ 0.56
KRT23-205ENST00000494691 ABCA5Q8WWZ7 1642 aa18.54■□□□□ 0.56
KRT23-205ENST00000494691 NUP160Q12769 1436 aa18.54■□□□□ 0.56
KRT23-205ENST00000494691 SHROOM2Q13796 1616 aa18.53■□□□□ 0.56
KRT23-205ENST00000494691 DIP2BQ9P265 1576 aa18.5■□□□□ 0.55
KRT23-205ENST00000494691 ABCA10Q8WWZ4 1543 aa18.49■□□□□ 0.55
KRT23-205ENST00000494691 NPM1P06748 294 aaKnown RBP eCLIP18.49■□□□□ 0.55
KRT23-205ENST00000494691 ADAMTS12P58397 1594 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms