RNA–Protein interactions for RNA: ENST00000494553.1

FGD3-207, Transcript of FYVE, RhoGEF and PH domain containing 3, humanhuman

TSL 3

Gene FGD3, Length 244 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD3-207ENST00000494553 NISCHQ9Y2I1 1504 aa21.38■■□□□ 1.01
FGD3-207ENST00000494553 CCDC180Q9P1Z9 1646 aa19.05■□□□□ 0.64
FGD3-207ENST00000494553 ABCC9O60706 1549 aa18.59■□□□□ 0.57
FGD3-207ENST00000494553 RB1CC1Q8TDY2 1594 aa17.87■□□□□ 0.45
FGD3-207ENST00000494553 DCAF8L2P0C7V8 631 aa17.87■□□□□ 0.45
FGD3-207ENST00000494553 NACADO15069 1562 aa17.84■□□□□ 0.45
FGD3-207ENST00000494553 ZCCHC6Q5VYS8 1495 aaKnown RBP17.82■□□□□ 0.44
FGD3-207ENST00000494553 MYO15BQ96JP2 1530 aa17.67■□□□□ 0.42
FGD3-207ENST00000494553 DCAF1Q9Y4B6 1507 aa17.64■□□□□ 0.41
FGD3-207ENST00000494553 UNC13AQ9UPW8 1703 aa17.64■□□□□ 0.41
FGD3-207ENST00000494553 SCRIBQ14160 1630 aa17.42■□□□□ 0.38
FGD3-207ENST00000494553 BICRAQ9NZM4 1560 aa17.36■□□□□ 0.37
FGD3-207ENST00000494553 PABPN1Q86U42 306 aaKnown RBP eCLIP17.35■□□□□ 0.37
FGD3-207ENST00000494553 SHROOM4Q9ULL8 1493 aa17.06■□□□□ 0.32
FGD3-207ENST00000494553 DNAJC5BQ9UF47 199 aa16.99■□□□□ 0.31
FGD3-207ENST00000494553 EIF4G1Q04637 1599 aaKnown RBP16.88■□□□□ 0.29
FGD3-207ENST00000494553 CC2D2AQ9P2K1 1620 aa16.83■□□□□ 0.28
FGD3-207ENST00000494553 CECR2Q9BXF3 1484 aa16.67■□□□□ 0.26
FGD3-207ENST00000494553 SMARCA4P51532 1647 aa16.63■□□□□ 0.25
FGD3-207ENST00000494553 BAZ1AQ9NRL2 1556 aaPredicted RBP16.56■□□□□ 0.24
FGD3-207ENST00000494553 MROH2BQ7Z745 1585 aa16.51■□□□□ 0.23
FGD3-207ENST00000494553 ATAD2BQ9ULI0 1458 aa16.47■□□□□ 0.23
FGD3-207ENST00000494553 SMARCA2P51531 1590 aa16.46■□□□□ 0.23
FGD3-207ENST00000494553 NCAPD3P42695 1498 aa16.42■□□□□ 0.22
FGD3-207ENST00000494553 PEG3Q9GZU2 1588 aa16.41■□□□□ 0.22
FGD3-207ENST00000494553 WIZO95785 1651 aa16.4■□□□□ 0.22
FGD3-207ENST00000494553 HMGXB3Q12766 1538 aa16.39■□□□□ 0.21
FGD3-207ENST00000494553 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
FGD3-207ENST00000494553 RSF1Q96T23 1441 aaPredicted RBP16.28■□□□□ 0.2
FGD3-207ENST00000494553 TOP2AP11388 1531 aaKnown RBP16.15■□□□□ 0.18
FGD3-207ENST00000494553 NESP48681 1621 aa16.11■□□□□ 0.17
FGD3-207ENST00000494553 LAMC3Q9Y6N6 1575 aa16.04■□□□□ 0.16
FGD3-207ENST00000494553 KIF21AQ7Z4S6 1674 aa16.01■□□□□ 0.15
FGD3-207ENST00000494553 ERCC6Q03468 1493 aa15.99■□□□□ 0.15
FGD3-207ENST00000494553 SUPT5HO00267 1087 aaKnown RBP15.95■□□□□ 0.14
FGD3-207ENST00000494553 CADPSQ9ULU8 1353 aa15.95■□□□□ 0.14
FGD3-207ENST00000494553 CCDC88BA6NC98 1476 aa15.95■□□□□ 0.14
FGD3-207ENST00000494553 PRDM2Q13029 1718 aa15.94■□□□□ 0.14
FGD3-207ENST00000494553 THOC2Q8NI27 1593 aaKnown RBP15.87■□□□□ 0.13
FGD3-207ENST00000494553 PDS5BQ9NTI5 1447 aa15.87■□□□□ 0.13
FGD3-207ENST00000494553 CFTRP13569 1480 aa15.87■□□□□ 0.13
FGD3-207ENST00000494553 FANCD2Q9BXW9 1451 aa15.8■□□□□ 0.12
FGD3-207ENST00000494553 CEP164Q9UPV0 1460 aa15.78■□□□□ 0.12
FGD3-207ENST00000494553 CUX2O14529 1486 aa15.78■□□□□ 0.12
FGD3-207ENST00000494553 MRC2Q9UBG0 1479 aa15.75■□□□□ 0.11
FGD3-207ENST00000494553 WDR62O43379 1518 aa15.7■□□□□ 0.1
FGD3-207ENST00000494553 URB2Q14146 1524 aaKnown RBP15.67■□□□□ 0.1
FGD3-207ENST00000494553 TOPBP1Q92547 1522 aa15.58■□□□□ 0.08
FGD3-207ENST00000494553 DNMBPQ6XZF7 1577 aa15.57■□□□□ 0.08
FGD3-207ENST00000494553 ABCC8Q09428 1581 aa15.52■□□□□ 0.07
FGD3-207ENST00000494553 CUX1P39880 1505 aa15.48■□□□□ 0.07
FGD3-207ENST00000494553 TARBP1Q13395 1621 aaKnown RBP15.43■□□□□ 0.06
FGD3-207ENST00000494553 POLA1P09884 1462 aaPredicted RBP15.43■□□□□ 0.06
FGD3-207ENST00000494553 IFT140Q96RY7 1462 aa15.43■□□□□ 0.06
FGD3-207ENST00000494553 FGD5Q6ZNL6 1462 aa15.42■□□□□ 0.06
FGD3-207ENST00000494553 BIVM-ERCC5R4GMW8 1640 aa15.4■□□□□ 0.06
FGD3-207ENST00000494553 ZNF608Q9ULD9 1512 aaPredicted RBP15.4■□□□□ 0.06
FGD3-207ENST00000494553 RAD54L2Q9Y4B4 1467 aa15.4■□□□□ 0.06
FGD3-207ENST00000494553 SYNJ1O43426 1573 aa15.39■□□□□ 0.05
FGD3-207ENST00000494553 EIF4G3O43432 1585 aaKnown RBP15.38■□□□□ 0.05
FGD3-207ENST00000494553 WDR97A6NE52 1622 aa15.37■□□□□ 0.05
FGD3-207ENST00000494553 TOP2BQ02880 1626 aa15.36■□□□□ 0.05
FGD3-207ENST00000494553 SOGA1O94964 1423 aa15.35■□□□□ 0.05
FGD3-207ENST00000494553 WRNQ14191 1432 aaPredicted RBP eCLIP15.35■□□□□ 0.05
FGD3-207ENST00000494553 AQRO60306 1485 aaKnown RBP eCLIP15.31■□□□□ 0.04
FGD3-207ENST00000494553 PBRM1Q86U86 1689 aa15.28■□□□□ 0.04
FGD3-207ENST00000494553 TDRD9Q8NDG6 1382 aaKnown RBP15.27■□□□□ 0.04
FGD3-207ENST00000494553 CHD1O14646 1710 aa15.26■□□□□ 0.03
FGD3-207ENST00000494553 ABCA10Q8WWZ4 1543 aa15.24■□□□□ 0.03
FGD3-207ENST00000494553 ABCA5Q8WWZ7 1642 aa15.23■□□□□ 0.03
FGD3-207ENST00000494553 DNAJC5Q9H3Z4 198 aa15.22■□□□□ 0.03
FGD3-207ENST00000494553 GAPVD1Q14C86 1478 aa15.19■□□□□ 0.02
FGD3-207ENST00000494553 SNAPC4Q5SXM2 1469 aa15.18■□□□□ 0.02
FGD3-207ENST00000494553 GRIN2BQ13224 1484 aa15.16■□□□□ 0.02
FGD3-207ENST00000494553 FBLN2P98095 1184 aa15.12■□□□□ 0.01
FGD3-207ENST00000494553 MAGI1Q96QZ7 1491 aaPredicted RBP15.12■□□□□ 0.01
FGD3-207ENST00000494553 OSCARQ8IYS5 282 aa15.1■□□□□ 0.01
FGD3-207ENST00000494553 ADAMTS12P58397 1594 aa15.08■□□□□ 0
FGD3-207ENST00000494553 SYNJ2O15056 1496 aa15.07■□□□□ 0
FGD3-207ENST00000494553 ERICH3Q5RHP9 1530 aa15.06■□□□□ 0
FGD3-207ENST00000494553 CHMP7Q8WUX9 453 aaPredicted RBP15.04■□□□□ -0
FGD3-207ENST00000494553 KIF27Q86VH2 1401 aa15.01□□□□□ -0.01
FGD3-207ENST00000494553 TRIM41Q8WV44 630 aa15.01□□□□□ -0.01
FGD3-207ENST00000494553 GRIN2AQ12879 1464 aa14.99□□□□□ -0.01
FGD3-207ENST00000494553 FHAD1B1AJZ9 1412 aa14.99□□□□□ -0.01
FGD3-207ENST00000494553 CUL7Q14999 1698 aa14.98□□□□□ -0.01
FGD3-207ENST00000494553 RIMBP3CA6NJZ7 1639 aa14.98□□□□□ -0.01
FGD3-207ENST00000494553 RIMBP3BA6NNM3 1639 aa14.98□□□□□ -0.01
FGD3-207ENST00000494553 RIMBP3Q9UFD9 1639 aa14.98□□□□□ -0.01
FGD3-207ENST00000494553 CLASP1Q7Z460 1538 aa14.97□□□□□ -0.01
FGD3-207ENST00000494553 RUSC2Q8N2Y8 1516 aa14.97□□□□□ -0.01
FGD3-207ENST00000494553 CEP170Q5SW79 1584 aa14.96□□□□□ -0.01
FGD3-207ENST00000494553 IGF1RP08069 1367 aa14.94□□□□□ -0.02
FGD3-207ENST00000494553 ARHGEF11O15085 1522 aa14.92□□□□□ -0.02
FGD3-207ENST00000494553 NUP160Q12769 1436 aa14.89□□□□□ -0.03
FGD3-207ENST00000494553 CARMIL1Q5VZK9 1371 aa14.87□□□□□ -0.03
FGD3-207ENST00000494553 CHIC1Q5VXU3 224 aa14.87□□□□□ -0.03
FGD3-207ENST00000494553 SHROOM2Q13796 1616 aa14.84□□□□□ -0.03
FGD3-207ENST00000494553 ERCC6L2Q5T890 1561 aa14.82□□□□□ -0.04
FGD3-207ENST00000494553 ARAP1Q96P48 1450 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms