RNA–Protein interactions for RNA: ENST00000494428.5

TTLL4-221, Transcript of tubulin tyrosine ligase like 4, humanhuman

TSL 3

Gene TTLL4, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTLL4-221ENST00000494428 NISCHQ9Y2I1 1504 aa19.74■□□□□ 0.75
TTLL4-221ENST00000494428 ABCC9O60706 1549 aa18.78■□□□□ 0.6
TTLL4-221ENST00000494428 DNAJC5BQ9UF47 199 aa18.19■□□□□ 0.5
TTLL4-221ENST00000494428 CCDC180Q9P1Z9 1646 aa18.01■□□□□ 0.47
TTLL4-221ENST00000494428 RB1CC1Q8TDY2 1594 aa17.51■□□□□ 0.39
TTLL4-221ENST00000494428 PABPN1Q86U42 306 aaKnown RBP eCLIP17.38■□□□□ 0.37
TTLL4-221ENST00000494428 DNAJC5Q9H3Z4 198 aa17.2■□□□□ 0.34
TTLL4-221ENST00000494428 NACADO15069 1562 aa17.19■□□□□ 0.34
TTLL4-221ENST00000494428 UNC13AQ9UPW8 1703 aa17.13■□□□□ 0.33
TTLL4-221ENST00000494428 DCAF8L2P0C7V8 631 aa17.1■□□□□ 0.33
TTLL4-221ENST00000494428 BICRAQ9NZM4 1560 aa17.01■□□□□ 0.31
TTLL4-221ENST00000494428 CECR2Q9BXF3 1484 aa16.96■□□□□ 0.31
TTLL4-221ENST00000494428 CC2D2AQ9P2K1 1620 aa16.89■□□□□ 0.29
TTLL4-221ENST00000494428 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
TTLL4-221ENST00000494428 MYO15BQ96JP2 1530 aa16.66■□□□□ 0.26
TTLL4-221ENST00000494428 SHROOM4Q9ULL8 1493 aa16.66■□□□□ 0.26
TTLL4-221ENST00000494428 SCRIBQ14160 1630 aa16.45■□□□□ 0.22
TTLL4-221ENST00000494428 CUX2O14529 1486 aa16.41■□□□□ 0.22
TTLL4-221ENST00000494428 ERCC6Q03468 1493 aa16.28■□□□□ 0.2
TTLL4-221ENST00000494428 TRIM41Q8WV44 630 aa16.27■□□□□ 0.2
TTLL4-221ENST00000494428 DCAF1Q9Y4B6 1507 aa16.21■□□□□ 0.19
TTLL4-221ENST00000494428 ZCCHC6Q5VYS8 1495 aaKnown RBP16.21■□□□□ 0.19
TTLL4-221ENST00000494428 NESP48681 1621 aa15.92■□□□□ 0.14
TTLL4-221ENST00000494428 NCAPD3P42695 1498 aa15.87■□□□□ 0.13
TTLL4-221ENST00000494428 THOC2Q8NI27 1593 aaKnown RBP15.87■□□□□ 0.13
TTLL4-221ENST00000494428 SMARCA2P51531 1590 aa15.79■□□□□ 0.12
TTLL4-221ENST00000494428 ATAD2BQ9ULI0 1458 aa15.75■□□□□ 0.11
TTLL4-221ENST00000494428 HMGXB3Q12766 1538 aa15.7■□□□□ 0.1
TTLL4-221ENST00000494428 KIF21AQ7Z4S6 1674 aa15.69■□□□□ 0.1
TTLL4-221ENST00000494428 LAMC3Q9Y6N6 1575 aa15.65■□□□□ 0.1
TTLL4-221ENST00000494428 BAZ1AQ9NRL2 1556 aaPredicted RBP15.62■□□□□ 0.09
TTLL4-221ENST00000494428 PDS5BQ9NTI5 1447 aa15.6■□□□□ 0.09
TTLL4-221ENST00000494428 BAZ1BQ9UIG0 1483 aaKnown RBP15.59■□□□□ 0.09
TTLL4-221ENST00000494428 OSCARQ8IYS5 282 aa15.57■□□□□ 0.08
TTLL4-221ENST00000494428 SMARCA4P51532 1647 aa15.57■□□□□ 0.08
TTLL4-221ENST00000494428 MRC2Q9UBG0 1479 aa15.51■□□□□ 0.07
TTLL4-221ENST00000494428 WDR62O43379 1518 aa15.48■□□□□ 0.07
TTLL4-221ENST00000494428 AEBP2Q6ZN18 517 aaPredicted RBP15.47■□□□□ 0.07
TTLL4-221ENST00000494428 RIMBP3CA6NJZ7 1639 aa15.46■□□□□ 0.06
TTLL4-221ENST00000494428 RIMBP3BA6NNM3 1639 aa15.46■□□□□ 0.06
TTLL4-221ENST00000494428 RIMBP3Q9UFD9 1639 aa15.46■□□□□ 0.06
TTLL4-221ENST00000494428 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
TTLL4-221ENST00000494428 CADPSQ9ULU8 1353 aa15.37■□□□□ 0.05
TTLL4-221ENST00000494428 PEG3Q9GZU2 1588 aa15.37■□□□□ 0.05
TTLL4-221ENST00000494428 ARHGEF11O15085 1522 aa15.33■□□□□ 0.05
TTLL4-221ENST00000494428 CEP164Q9UPV0 1460 aa15.33■□□□□ 0.04
TTLL4-221ENST00000494428 CYB5RLQ6IPT4 315 aa15.3■□□□□ 0.04
TTLL4-221ENST00000494428 FANCD2Q9BXW9 1451 aa15.24■□□□□ 0.03
TTLL4-221ENST00000494428 MROH2BQ7Z745 1585 aa15.23■□□□□ 0.03
TTLL4-221ENST00000494428 URB2Q14146 1524 aaKnown RBP15.14■□□□□ 0.01
TTLL4-221ENST00000494428 ARAP1Q96P48 1450 aa15.13■□□□□ 0.01
TTLL4-221ENST00000494428 ZNF608Q9ULD9 1512 aaPredicted RBP15.09■□□□□ 0.01
TTLL4-221ENST00000494428 CFTRP13569 1480 aa15.04■□□□□ -0
TTLL4-221ENST00000494428 WIZO95785 1651 aa15.03■□□□□ -0
TTLL4-221ENST00000494428 IFT140Q96RY7 1462 aa15.01□□□□□ -0.01
TTLL4-221ENST00000494428 CHD1O14646 1710 aa15□□□□□ -0.01
TTLL4-221ENST00000494428 EIF4G3O43432 1585 aaKnown RBP14.98□□□□□ -0.01
TTLL4-221ENST00000494428 FBLN2P98095 1184 aa14.97□□□□□ -0.01
TTLL4-221ENST00000494428 RSF1Q96T23 1441 aaPredicted RBP14.97□□□□□ -0.01
TTLL4-221ENST00000494428 ILDR1Q86SU0 546 aaPredicted RBP14.87□□□□□ -0.03
TTLL4-221ENST00000494428 AQRO60306 1485 aaKnown RBP eCLIP14.87□□□□□ -0.036e-8■■□□□ 12.6
TTLL4-221ENST00000494428 TOPBP1Q92547 1522 aa14.86□□□□□ -0.03
TTLL4-221ENST00000494428 PRDM2Q13029 1718 aa14.86□□□□□ -0.03
TTLL4-221ENST00000494428 CLASP1Q7Z460 1538 aa14.77□□□□□ -0.04
TTLL4-221ENST00000494428 TOP2AP11388 1531 aaKnown RBP14.76□□□□□ -0.05
TTLL4-221ENST00000494428 TARBP1Q13395 1621 aaKnown RBP14.76□□□□□ -0.05
TTLL4-221ENST00000494428 ABCC8Q09428 1581 aa14.74□□□□□ -0.05
TTLL4-221ENST00000494428 DNMBPQ6XZF7 1577 aa14.73□□□□□ -0.05
TTLL4-221ENST00000494428 SYNJ1O43426 1573 aa14.73□□□□□ -0.05
TTLL4-221ENST00000494428 GAPVD1Q14C86 1478 aa14.7□□□□□ -0.06
TTLL4-221ENST00000494428 SNAPC4Q5SXM2 1469 aa14.7□□□□□ -0.06
TTLL4-221ENST00000494428 CHMP7Q8WUX9 453 aaPredicted RBP14.7□□□□□ -0.06
TTLL4-221ENST00000494428 TDRD9Q8NDG6 1382 aaKnown RBP14.67□□□□□ -0.06
TTLL4-221ENST00000494428 POLA1P09884 1462 aaPredicted RBP14.66□□□□□ -0.06
TTLL4-221ENST00000494428 RAD54L2Q9Y4B4 1467 aa14.65□□□□□ -0.06
TTLL4-221ENST00000494428 CCDC88BA6NC98 1476 aa14.61□□□□□ -0.07
TTLL4-221ENST00000494428 MAGI1Q96QZ7 1491 aaPredicted RBP14.59□□□□□ -0.07
TTLL4-221ENST00000494428 SOGA1O94964 1423 aa14.58□□□□□ -0.07
TTLL4-221ENST00000494428 SYNJ2O15056 1496 aa14.57□□□□□ -0.08
TTLL4-221ENST00000494428 KDM4FA0A1W2PPD8 638 aa14.56□□□□□ -0.08
TTLL4-221ENST00000494428 KIF13AQ9H1H9 1805 aa14.56□□□□□ -0.08
TTLL4-221ENST00000494428 WDR97A6NE52 1622 aa14.53□□□□□ -0.08
TTLL4-221ENST00000494428 ERCC6L2Q5T890 1561 aa14.53□□□□□ -0.08
TTLL4-221ENST00000494428 GRIN2BQ13224 1484 aa14.53□□□□□ -0.08
TTLL4-221ENST00000494428 FGD5Q6ZNL6 1462 aa14.49□□□□□ -0.09
TTLL4-221ENST00000494428 PBRM1Q86U86 1689 aa14.46□□□□□ -0.1
TTLL4-221ENST00000494428 FAM69CQ0P6D2 419 aa14.44□□□□□ -0.1
TTLL4-221ENST00000494428 KDM6BO15054 1643 aa14.42□□□□□ -0.1
TTLL4-221ENST00000494428 CEP170Q5SW79 1584 aa14.42□□□□□ -0.1
TTLL4-221ENST00000494428 ABCC10Q5T3U5 1492 aa14.38□□□□□ -0.11
TTLL4-221ENST00000494428 GRIN2AQ12879 1464 aa14.36□□□□□ -0.11
TTLL4-221ENST00000494428 CUX1P39880 1505 aa14.35□□□□□ -0.11
TTLL4-221ENST00000494428 HECW2Q9P2P5 1572 aa14.34□□□□□ -0.11
TTLL4-221ENST00000494428 TSPOAP1O95153 1857 aa14.33□□□□□ -0.11
TTLL4-221ENST00000494428 DIP2BQ9P265 1576 aa14.33□□□□□ -0.12
TTLL4-221ENST00000494428 NPM1P06748 294 aaKnown RBP eCLIP14.32□□□□□ -0.12
TTLL4-221ENST00000494428 SHROOM2Q13796 1616 aa14.31□□□□□ -0.12
TTLL4-221ENST00000494428 NUP160Q12769 1436 aa14.31□□□□□ -0.12
TTLL4-221ENST00000494428 ADGRL1O94910 1474 aa14.31□□□□□ -0.12
TTLL4-221ENST00000494428 ABCA5Q8WWZ7 1642 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms