RNA–Protein interactions for RNA: ENST00000494217.5

RFX5-221, Transcript of regulatory factor X5, humanhuman

TSL 1 (best)

Gene RFX5, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5-221ENST00000494217 NISCHQ9Y2I1 1504 aa34.99■■■■□ 3.19
RFX5-221ENST00000494217 ABCC9O60706 1549 aa32.37■■■□□ 2.77
RFX5-221ENST00000494217 CCDC180Q9P1Z9 1646 aa31.86■■■□□ 2.69
RFX5-221ENST00000494217 DNAJC5BQ9UF47 199 aa30.87■■■□□ 2.53
RFX5-221ENST00000494217 RB1CC1Q8TDY2 1594 aa30.63■■■□□ 2.49
RFX5-221ENST00000494217 NACADO15069 1562 aa30.23■■■□□ 2.43
RFX5-221ENST00000494217 UNC13AQ9UPW8 1703 aa29.96■■■□□ 2.39
RFX5-221ENST00000494217 PABPN1Q86U42 306 aaKnown RBP eCLIP29.94■■■□□ 2.38
RFX5-221ENST00000494217 DCAF8L2P0C7V8 631 aa29.75■■■□□ 2.35
RFX5-221ENST00000494217 BICRAQ9NZM4 1560 aa29.67■■■□□ 2.34
RFX5-221ENST00000494217 MYO15BQ96JP2 1530 aa29.58■■■□□ 2.33
RFX5-221ENST00000494217 SHROOM4Q9ULL8 1493 aa29.34■■■□□ 2.29
RFX5-221ENST00000494217 CC2D2AQ9P2K1 1620 aa29.28■■■□□ 2.28
RFX5-221ENST00000494217 CECR2Q9BXF3 1484 aa29.28■■■□□ 2.28
RFX5-221ENST00000494217 EIF4G1Q04637 1599 aaKnown RBP29.05■■■□□ 2.24
RFX5-221ENST00000494217 DNAJC5Q9H3Z4 198 aa28.98■■■□□ 2.23
RFX5-221ENST00000494217 DCAF1Q9Y4B6 1507 aa28.92■■■□□ 2.22
RFX5-221ENST00000494217 SCRIBQ14160 1630 aa28.87■■■□□ 2.21
RFX5-221ENST00000494217 ZCCHC6Q5VYS8 1495 aaKnown RBP28.86■■■□□ 2.21
RFX5-221ENST00000494217 CUX2O14529 1486 aa28.31■■■□□ 2.12
RFX5-221ENST00000494217 ERCC6Q03468 1493 aa28.09■■■□□ 2.09
RFX5-221ENST00000494217 NCAPD3P42695 1498 aa27.84■■■□□ 2.05
RFX5-221ENST00000494217 HMGXB3Q12766 1538 aa27.65■■■□□ 2.02
RFX5-221ENST00000494217 ATAD2BQ9ULI0 1458 aa27.64■■■□□ 2.01
RFX5-221ENST00000494217 SMARCA2P51531 1590 aa27.62■■■□□ 2.01
RFX5-221ENST00000494217 NESP48681 1621 aa27.59■■■□□ 2.01
RFX5-221ENST00000494217 THOC2Q8NI27 1593 aaKnown RBP27.56■■■□□ 2
RFX5-221ENST00000494217 SMARCA4P51532 1647 aa27.5■■□□□ 1.99
RFX5-221ENST00000494217 LAMC3Q9Y6N6 1575 aa27.42■■□□□ 1.98
RFX5-221ENST00000494217 TRIM41Q8WV44 630 aa27.41■■□□□ 1.98
RFX5-221ENST00000494217 BAZ1BQ9UIG0 1483 aaKnown RBP27.38■■□□□ 1.97
RFX5-221ENST00000494217 KIF21AQ7Z4S6 1674 aa27.34■■□□□ 1.97
RFX5-221ENST00000494217 BAZ1AQ9NRL2 1556 aaPredicted RBP27.26■■□□□ 1.96
RFX5-221ENST00000494217 PEG3Q9GZU2 1588 aa27.25■■□□□ 1.95
RFX5-221ENST00000494217 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
RFX5-221ENST00000494217 MRC2Q9UBG0 1479 aa27.05■■□□□ 1.92
RFX5-221ENST00000494217 WDR62O43379 1518 aa27.01■■□□□ 1.91
RFX5-221ENST00000494217 CADPSQ9ULU8 1353 aa26.95■■□□□ 1.9
RFX5-221ENST00000494217 MROH2BQ7Z745 1585 aa26.91■■□□□ 1.9
RFX5-221ENST00000494217 CEP164Q9UPV0 1460 aa26.81■■□□□ 1.88
RFX5-221ENST00000494217 OSCARQ8IYS5 282 aa26.8■■□□□ 1.88
RFX5-221ENST00000494217 FANCD2Q9BXW9 1451 aa26.67■■□□□ 1.86
RFX5-221ENST00000494217 RIMBP3CA6NJZ7 1639 aa26.61■■□□□ 1.85
RFX5-221ENST00000494217 RIMBP3BA6NNM3 1639 aa26.61■■□□□ 1.85
RFX5-221ENST00000494217 RIMBP3Q9UFD9 1639 aa26.61■■□□□ 1.85
RFX5-221ENST00000494217 WIZO95785 1651 aa26.6■■□□□ 1.85
RFX5-221ENST00000494217 CFTRP13569 1480 aa26.5■■□□□ 1.83
RFX5-221ENST00000494217 URB2Q14146 1524 aaKnown RBP26.47■■□□□ 1.83
RFX5-221ENST00000494217 ARHGEF11O15085 1522 aa26.42■■□□□ 1.82
RFX5-221ENST00000494217 PRDM2Q13029 1718 aa26.39■■□□□ 1.81
RFX5-221ENST00000494217 IFT140Q96RY7 1462 aa26.29■■□□□ 1.8
RFX5-221ENST00000494217 TOP2AP11388 1531 aaKnown RBP26.24■■□□□ 1.79
RFX5-221ENST00000494217 ZNF608Q9ULD9 1512 aaPredicted RBP26.23■■□□□ 1.79
RFX5-221ENST00000494217 CYB5RLQ6IPT4 315 aa26.18■■□□□ 1.78
RFX5-221ENST00000494217 TRHP20396 242 aaPredicted RBP26.17■■□□□ 1.78
RFX5-221ENST00000494217 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
RFX5-221ENST00000494217 CHD1O14646 1710 aa26.14■■□□□ 1.77
RFX5-221ENST00000494217 TOPBP1Q92547 1522 aa26.09■■□□□ 1.77
RFX5-221ENST00000494217 ARAP1Q96P48 1450 aa26.08■■□□□ 1.77
RFX5-221ENST00000494217 RSF1Q96T23 1441 aaPredicted RBP26.07■■□□□ 1.76
RFX5-221ENST00000494217 ABCC8Q09428 1581 aa26.06■■□□□ 1.76
RFX5-221ENST00000494217 AEBP2Q6ZN18 517 aaPredicted RBP26■■□□□ 1.75
RFX5-221ENST00000494217 DNMBPQ6XZF7 1577 aa25.98■■□□□ 1.75
RFX5-221ENST00000494217 TARBP1Q13395 1621 aaKnown RBP25.93■■□□□ 1.74
RFX5-221ENST00000494217 AQRO60306 1485 aaKnown RBP eCLIP25.9■■□□□ 1.74
RFX5-221ENST00000494217 FBLN2P98095 1184 aa25.88■■□□□ 1.73
RFX5-221ENST00000494217 CCDC88BA6NC98 1476 aa25.87■■□□□ 1.73
RFX5-221ENST00000494217 CHIC1Q5VXU3 224 aa25.86■■□□□ 1.73
RFX5-221ENST00000494217 POLA1P09884 1462 aaPredicted RBP25.76■■□□□ 1.71
RFX5-221ENST00000494217 CLASP1Q7Z460 1538 aa25.76■■□□□ 1.71
RFX5-221ENST00000494217 SYNJ1O43426 1573 aa25.74■■□□□ 1.71
RFX5-221ENST00000494217 WDR97A6NE52 1622 aa25.74■■□□□ 1.71
RFX5-221ENST00000494217 SNAPC4Q5SXM2 1469 aa25.67■■□□□ 1.7
RFX5-221ENST00000494217 MAGI1Q96QZ7 1491 aaPredicted RBP25.63■■□□□ 1.69
RFX5-221ENST00000494217 RAD54L2Q9Y4B4 1467 aa25.63■■□□□ 1.69
RFX5-221ENST00000494217 SOGA1O94964 1423 aa25.61■■□□□ 1.69
RFX5-221ENST00000494217 TDRD9Q8NDG6 1382 aaKnown RBP25.6■■□□□ 1.69
RFX5-221ENST00000494217 CHMP7Q8WUX9 453 aaPredicted RBP25.6■■□□□ 1.69
RFX5-221ENST00000494217 SYNJ2O15056 1496 aa25.53■■□□□ 1.68
RFX5-221ENST00000494217 GRIN2BQ13224 1484 aa25.52■■□□□ 1.68
RFX5-221ENST00000494217 GAPVD1Q14C86 1478 aa25.52■■□□□ 1.68
RFX5-221ENST00000494217 FGD5Q6ZNL6 1462 aa25.5■■□□□ 1.67
RFX5-221ENST00000494217 PBRM1Q86U86 1689 aa25.46■■□□□ 1.67
RFX5-221ENST00000494217 CUX1P39880 1505 aa25.35■■□□□ 1.65
RFX5-221ENST00000494217 ABCA5Q8WWZ7 1642 aa25.25■■□□□ 1.63
RFX5-221ENST00000494217 KIF13AQ9H1H9 1805 aa25.25■■□□□ 1.63
RFX5-221ENST00000494217 ERCC6L2Q5T890 1561 aa25.22■■□□□ 1.63
RFX5-221ENST00000494217 CEP170Q5SW79 1584 aa25.19■■□□□ 1.62
RFX5-221ENST00000494217 ABCA10Q8WWZ4 1543 aa25.19■■□□□ 1.62
RFX5-221ENST00000494217 GRIN2AQ12879 1464 aa25.19■■□□□ 1.62
RFX5-221ENST00000494217 SHROOM2Q13796 1616 aa25.14■■□□□ 1.61
RFX5-221ENST00000494217 ADAMTS12P58397 1594 aa25.12■■□□□ 1.61
RFX5-221ENST00000494217 NUP160Q12769 1436 aa25.12■■□□□ 1.61
RFX5-221ENST00000494217 FHAD1B1AJZ9 1412 aa24.97■■□□□ 1.59
RFX5-221ENST00000494217 ABCC10Q5T3U5 1492 aa24.95■■□□□ 1.58
RFX5-221ENST00000494217 WRNQ14191 1432 aaPredicted RBP eCLIP24.95■■□□□ 1.58
RFX5-221ENST00000494217 PRG4Q92954 1404 aaPredicted RBP24.91■■□□□ 1.58
RFX5-221ENST00000494217 MAPKBP1O60336 1514 aa24.91■■□□□ 1.58
RFX5-221ENST00000494217 KDM6BO15054 1643 aa24.9■■□□□ 1.58
RFX5-221ENST00000494217 DIP2BQ9P265 1576 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms