RNA–Protein interactions for RNA: ENST00000494018.1

NR1H3-225, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-225ENST00000494018 NISCHQ9Y2I1 1504 aa25.15■■□□□ 1.62
NR1H3-225ENST00000494018 ABCC9O60706 1549 aa23.92■■□□□ 1.42
NR1H3-225ENST00000494018 DNAJC5BQ9UF47 199 aa23.26■■□□□ 1.31
NR1H3-225ENST00000494018 CCDC180Q9P1Z9 1646 aa22.86■■□□□ 1.25
NR1H3-225ENST00000494018 RB1CC1Q8TDY2 1594 aa22.21■■□□□ 1.15
NR1H3-225ENST00000494018 PABPN1Q86U42 306 aaKnown RBP eCLIP22.21■■□□□ 1.15
NR1H3-225ENST00000494018 DCAF8L2P0C7V8 631 aa21.89■■□□□ 1.09
NR1H3-225ENST00000494018 UNC13AQ9UPW8 1703 aa21.86■■□□□ 1.09
NR1H3-225ENST00000494018 DNAJC5Q9H3Z4 198 aa21.84■■□□□ 1.09
NR1H3-225ENST00000494018 NACADO15069 1562 aa21.81■■□□□ 1.08
NR1H3-225ENST00000494018 BICRAQ9NZM4 1560 aa21.67■■□□□ 1.06
NR1H3-225ENST00000494018 CECR2Q9BXF3 1484 aa21.56■■□□□ 1.04
NR1H3-225ENST00000494018 CC2D2AQ9P2K1 1620 aa21.49■■□□□ 1.03
NR1H3-225ENST00000494018 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
NR1H3-225ENST00000494018 MYO15BQ96JP2 1530 aa21.1■□□□□ 0.97
NR1H3-225ENST00000494018 SHROOM4Q9ULL8 1493 aa21.02■□□□□ 0.96
NR1H3-225ENST00000494018 SCRIBQ14160 1630 aa20.98■□□□□ 0.95
NR1H3-225ENST00000494018 CUX2O14529 1486 aa20.76■□□□□ 0.91
NR1H3-225ENST00000494018 TRIM41Q8WV44 630 aa20.72■□□□□ 0.91
NR1H3-225ENST00000494018 ERCC6Q03468 1493 aa20.66■□□□□ 0.9
NR1H3-225ENST00000494018 ZCCHC6Q5VYS8 1495 aaKnown RBP20.62■□□□□ 0.89
NR1H3-225ENST00000494018 DCAF1Q9Y4B6 1507 aa20.56■□□□□ 0.88
NR1H3-225ENST00000494018 NESP48681 1621 aa20.32■□□□□ 0.84
NR1H3-225ENST00000494018 NCAPD3P42695 1498 aa20.16■□□□□ 0.82
NR1H3-225ENST00000494018 THOC2Q8NI27 1593 aaKnown RBP20.16■□□□□ 0.82
NR1H3-225ENST00000494018 SMARCA2P51531 1590 aa20.09■□□□□ 0.81
NR1H3-225ENST00000494018 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
NR1H3-225ENST00000494018 KIF21AQ7Z4S6 1674 aa20■□□□□ 0.79
NR1H3-225ENST00000494018 HMGXB3Q12766 1538 aa19.91■□□□□ 0.78
NR1H3-225ENST00000494018 LAMC3Q9Y6N6 1575 aa19.85■□□□□ 0.77
NR1H3-225ENST00000494018 BAZ1AQ9NRL2 1556 aaPredicted RBP19.83■□□□□ 0.77
NR1H3-225ENST00000494018 BAZ1BQ9UIG0 1483 aaKnown RBP19.82■□□□□ 0.76
NR1H3-225ENST00000494018 SMARCA4P51532 1647 aa19.82■□□□□ 0.76
NR1H3-225ENST00000494018 OSCARQ8IYS5 282 aa19.79■□□□□ 0.76
NR1H3-225ENST00000494018 PDS5BQ9NTI5 1447 aa19.78■□□□□ 0.76
NR1H3-225ENST00000494018 MRC2Q9UBG0 1479 aa19.69■□□□□ 0.74
NR1H3-225ENST00000494018 RIMBP3CA6NJZ7 1639 aa19.66■□□□□ 0.74
NR1H3-225ENST00000494018 RIMBP3BA6NNM3 1639 aa19.66■□□□□ 0.74
NR1H3-225ENST00000494018 RIMBP3Q9UFD9 1639 aa19.66■□□□□ 0.74
NR1H3-225ENST00000494018 WDR62O43379 1518 aa19.64■□□□□ 0.73
NR1H3-225ENST00000494018 AEBP2Q6ZN18 517 aaPredicted RBP19.62■□□□□ 0.73
NR1H3-225ENST00000494018 TRHP20396 242 aaPredicted RBP19.59■□□□□ 0.73
NR1H3-225ENST00000494018 CADPSQ9ULU8 1353 aa19.56■□□□□ 0.72
NR1H3-225ENST00000494018 PEG3Q9GZU2 1588 aa19.51■□□□□ 0.71
NR1H3-225ENST00000494018 CYB5RLQ6IPT4 315 aa19.5■□□□□ 0.71
NR1H3-225ENST00000494018 ARHGEF11O15085 1522 aa19.46■□□□□ 0.71
NR1H3-225ENST00000494018 MROH2BQ7Z745 1585 aa19.45■□□□□ 0.7
NR1H3-225ENST00000494018 CEP164Q9UPV0 1460 aa19.45■□□□□ 0.7
NR1H3-225ENST00000494018 FANCD2Q9BXW9 1451 aa19.38■□□□□ 0.69
NR1H3-225ENST00000494018 URB2Q14146 1524 aaKnown RBP19.3■□□□□ 0.68
NR1H3-225ENST00000494018 ZNF608Q9ULD9 1512 aaPredicted RBP19.25■□□□□ 0.67
NR1H3-225ENST00000494018 ARAP1Q96P48 1450 aa19.24■□□□□ 0.67
NR1H3-225ENST00000494018 WIZO95785 1651 aa19.23■□□□□ 0.67
NR1H3-225ENST00000494018 CHD1O14646 1710 aa19.12■□□□□ 0.65
NR1H3-225ENST00000494018 CFTRP13569 1480 aa19.12■□□□□ 0.65
NR1H3-225ENST00000494018 FBLN2P98095 1184 aa19.12■□□□□ 0.65
NR1H3-225ENST00000494018 IFT140Q96RY7 1462 aa19.06■□□□□ 0.64
NR1H3-225ENST00000494018 EIF4G3O43432 1585 aaKnown RBP19.04■□□□□ 0.64
NR1H3-225ENST00000494018 AQRO60306 1485 aaKnown RBP eCLIP18.98■□□□□ 0.63
NR1H3-225ENST00000494018 RSF1Q96T23 1441 aaPredicted RBP18.95■□□□□ 0.62
NR1H3-225ENST00000494018 TOPBP1Q92547 1522 aa18.92■□□□□ 0.62
NR1H3-225ENST00000494018 ILDR1Q86SU0 546 aaPredicted RBP18.92■□□□□ 0.62
NR1H3-225ENST00000494018 PRDM2Q13029 1718 aa18.89■□□□□ 0.61
NR1H3-225ENST00000494018 TARBP1Q13395 1621 aaKnown RBP18.8■□□□□ 0.6
NR1H3-225ENST00000494018 TOP2AP11388 1531 aaKnown RBP18.79■□□□□ 0.6
NR1H3-225ENST00000494018 CLASP1Q7Z460 1538 aa18.77■□□□□ 0.6
NR1H3-225ENST00000494018 TDRD9Q8NDG6 1382 aaKnown RBP18.74■□□□□ 0.59
NR1H3-225ENST00000494018 DNMBPQ6XZF7 1577 aa18.73■□□□□ 0.59
NR1H3-225ENST00000494018 CHMP7Q8WUX9 453 aaPredicted RBP18.72■□□□□ 0.59
NR1H3-225ENST00000494018 SNAPC4Q5SXM2 1469 aa18.71■□□□□ 0.59
NR1H3-225ENST00000494018 RAD54L2Q9Y4B4 1467 aa18.71■□□□□ 0.59
NR1H3-225ENST00000494018 GAPVD1Q14C86 1478 aa18.69■□□□□ 0.58
NR1H3-225ENST00000494018 ABCC8Q09428 1581 aa18.68■□□□□ 0.58
NR1H3-225ENST00000494018 SYNJ1O43426 1573 aa18.68■□□□□ 0.58
NR1H3-225ENST00000494018 CCDC88BA6NC98 1476 aa18.66■□□□□ 0.58
NR1H3-225ENST00000494018 POLA1P09884 1462 aaPredicted RBP18.66■□□□□ 0.58
NR1H3-225ENST00000494018 SOGA1O94964 1423 aa18.59■□□□□ 0.57
NR1H3-225ENST00000494018 ERCC6L2Q5T890 1561 aa18.57■□□□□ 0.56
NR1H3-225ENST00000494018 KDM4FA0A1W2PPD8 638 aa18.56■□□□□ 0.56
NR1H3-225ENST00000494018 KIF13AQ9H1H9 1805 aa18.55■□□□□ 0.56
NR1H3-225ENST00000494018 MAGI1Q96QZ7 1491 aaPredicted RBP18.52■□□□□ 0.55
NR1H3-225ENST00000494018 SYNJ2O15056 1496 aa18.5■□□□□ 0.55
NR1H3-225ENST00000494018 GRIN2BQ13224 1484 aa18.46■□□□□ 0.55
NR1H3-225ENST00000494018 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.54
NR1H3-225ENST00000494018 PBRM1Q86U86 1689 aa18.41■□□□□ 0.54
NR1H3-225ENST00000494018 FAM69CQ0P6D2 419 aa18.39■□□□□ 0.53
NR1H3-225ENST00000494018 WDR97A6NE52 1622 aa18.37■□□□□ 0.53
NR1H3-225ENST00000494018 CEP170Q5SW79 1584 aa18.35■□□□□ 0.53
NR1H3-225ENST00000494018 CUX1P39880 1505 aa18.31■□□□□ 0.52
NR1H3-225ENST00000494018 TSPOAP1O95153 1857 aa18.31■□□□□ 0.52
NR1H3-225ENST00000494018 KDM6BO15054 1643 aa18.31■□□□□ 0.52
NR1H3-225ENST00000494018 GRIN2AQ12879 1464 aa18.25■□□□□ 0.51
NR1H3-225ENST00000494018 ABCC10Q5T3U5 1492 aa18.24■□□□□ 0.51
NR1H3-225ENST00000494018 SHROOM2Q13796 1616 aa18.2■□□□□ 0.5
NR1H3-225ENST00000494018 DIP2BQ9P265 1576 aa18.2■□□□□ 0.5
NR1H3-225ENST00000494018 HECW2Q9P2P5 1572 aa18.2■□□□□ 0.5
NR1H3-225ENST00000494018 ABCA5Q8WWZ7 1642 aa18.2■□□□□ 0.5
NR1H3-225ENST00000494018 NPM1P06748 294 aaKnown RBP eCLIP18.19■□□□□ 0.5
NR1H3-225ENST00000494018 NUP160Q12769 1436 aa18.17■□□□□ 0.5
NR1H3-225ENST00000494018 PRG4Q92954 1404 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms