RNA–Protein interactions for RNA: ENST00000493858.5

SEM1-211, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 2,707 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-211ENST00000493858 NISCHQ9Y2I1 1504 aa14.48□□□□□ -0.09
SEM1-211ENST00000493858 CCDC180Q9P1Z9 1646 aa13.13□□□□□ -0.31
SEM1-211ENST00000493858 ABCC9O60706 1549 aa12.48□□□□□ -0.41
SEM1-211ENST00000493858 MYO15BQ96JP2 1530 aa12.31□□□□□ -0.44
SEM1-211ENST00000493858 NACADO15069 1562 aa12.28□□□□□ -0.44
SEM1-211ENST00000493858 RB1CC1Q8TDY2 1594 aa12.26□□□□□ -0.45
SEM1-211ENST00000493858 DCAF1Q9Y4B6 1507 aa12.19□□□□□ -0.46
SEM1-211ENST00000493858 ZCCHC6Q5VYS8 1495 aaKnown RBP12.08□□□□□ -0.47
SEM1-211ENST00000493858 UNC13AQ9UPW8 1703 aa11.98□□□□□ -0.49
SEM1-211ENST00000493858 SHROOM4Q9ULL8 1493 aa11.98□□□□□ -0.49
SEM1-211ENST00000493858 BICRAQ9NZM4 1560 aa11.84□□□□□ -0.51
SEM1-211ENST00000493858 SCRIBQ14160 1630 aa11.65□□□□□ -0.54
SEM1-211ENST00000493858 DCAF8L2P0C7V8 631 aa11.64□□□□□ -0.55
SEM1-211ENST00000493858 PABPN1Q86U42 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
SEM1-211ENST00000493858 EIF4G1Q04637 1599 aaKnown RBP11.5□□□□□ -0.57
SEM1-211ENST00000493858 CC2D2AQ9P2K1 1620 aa11.45□□□□□ -0.58
SEM1-211ENST00000493858 DNAJC5BQ9UF47 199 aa11.43□□□□□ -0.58
SEM1-211ENST00000493858 CECR2Q9BXF3 1484 aa11.32□□□□□ -0.6
SEM1-211ENST00000493858 PEG3Q9GZU2 1588 aa11.3□□□□□ -0.6
SEM1-211ENST00000493858 SMARCA4P51532 1647 aa11.28□□□□□ -0.6
SEM1-211ENST00000493858 BAZ1AQ9NRL2 1556 aaPredicted RBP11.28□□□□□ -0.6
SEM1-211ENST00000493858 HMGXB3Q12766 1538 aa11.27□□□□□ -0.61
SEM1-211ENST00000493858 SMARCA2P51531 1590 aa11.26□□□□□ -0.61
SEM1-211ENST00000493858 NCAPD3P42695 1498 aa11.26□□□□□ -0.61
SEM1-211ENST00000493858 ATAD2BQ9ULI0 1458 aa11.18□□□□□ -0.62
SEM1-211ENST00000493858 MROH2BQ7Z745 1585 aa11.06□□□□□ -0.64
SEM1-211ENST00000493858 BAZ1BQ9UIG0 1483 aaKnown RBP11.06□□□□□ -0.64
SEM1-211ENST00000493858 LAMC3Q9Y6N6 1575 aa11.02□□□□□ -0.64
SEM1-211ENST00000493858 CUX2O14529 1486 aa10.95□□□□□ -0.66
SEM1-211ENST00000493858 TOP2AP11388 1531 aaKnown RBP10.95□□□□□ -0.66
SEM1-211ENST00000493858 WIZO95785 1651 aa10.95□□□□□ -0.66
SEM1-211ENST00000493858 PRDM2Q13029 1718 aa10.93□□□□□ -0.66
SEM1-211ENST00000493858 RSF1Q96T23 1441 aaPredicted RBP10.91□□□□□ -0.66
SEM1-211ENST00000493858 THOC2Q8NI27 1593 aaKnown RBP10.87□□□□□ -0.67
SEM1-211ENST00000493858 PDS5BQ9NTI5 1447 aa10.85□□□□□ -0.67
SEM1-211ENST00000493858 CADPSQ9ULU8 1353 aa10.83□□□□□ -0.68
SEM1-211ENST00000493858 KIF21AQ7Z4S6 1674 aa10.82□□□□□ -0.68
SEM1-211ENST00000493858 ERCC6Q03468 1493 aa10.82□□□□□ -0.68
SEM1-211ENST00000493858 CFTRP13569 1480 aa10.81□□□□□ -0.68
SEM1-211ENST00000493858 NESP48681 1621 aa10.79□□□□□ -0.68
SEM1-211ENST00000493858 WDR62O43379 1518 aa10.78□□□□□ -0.68
SEM1-211ENST00000493858 MRC2Q9UBG0 1479 aa10.75□□□□□ -0.69
SEM1-211ENST00000493858 CEP164Q9UPV0 1460 aa10.72□□□□□ -0.69
SEM1-211ENST00000493858 CCDC88BA6NC98 1476 aa10.7□□□□□ -0.7
SEM1-211ENST00000493858 FANCD2Q9BXW9 1451 aa10.69□□□□□ -0.7
SEM1-211ENST00000493858 ABCC8Q09428 1581 aa10.69□□□□□ -0.7
SEM1-211ENST00000493858 WDR97A6NE52 1622 aa10.64□□□□□ -0.71
SEM1-211ENST00000493858 DNMBPQ6XZF7 1577 aa10.61□□□□□ -0.71
SEM1-211ENST00000493858 URB2Q14146 1524 aaKnown RBP10.59□□□□□ -0.71
SEM1-211ENST00000493858 IFT140Q96RY7 1462 aa10.55□□□□□ -0.72
SEM1-211ENST00000493858 TOPBP1Q92547 1522 aa10.54□□□□□ -0.72
SEM1-211ENST00000493858 TARBP1Q13395 1621 aaKnown RBP10.5□□□□□ -0.73
SEM1-211ENST00000493858 DNAJC5Q9H3Z4 198 aa10.5□□□□□ -0.73
SEM1-211ENST00000493858 BIVM-ERCC5R4GMW8 1640 aa10.46□□□□□ -0.74
SEM1-211ENST00000493858 EIF4G3O43432 1585 aaKnown RBP10.44□□□□□ -0.74
SEM1-211ENST00000493858 POLA1P09884 1462 aaPredicted RBP10.42□□□□□ -0.74
SEM1-211ENST00000493858 CUX1P39880 1505 aa10.42□□□□□ -0.74
SEM1-211ENST00000493858 TOP2BQ02880 1626 aa10.4□□□□□ -0.74
SEM1-211ENST00000493858 FGD5Q6ZNL6 1462 aa10.37□□□□□ -0.75
SEM1-211ENST00000493858 ABCA5Q8WWZ7 1642 aa10.37□□□□□ -0.75
SEM1-211ENST00000493858 ABCA10Q8WWZ4 1543 aa10.37□□□□□ -0.75
SEM1-211ENST00000493858 PBRM1Q86U86 1689 aa10.36□□□□□ -0.75
SEM1-211ENST00000493858 MAGI1Q96QZ7 1491 aaPredicted RBP10.35□□□□□ -0.75
SEM1-211ENST00000493858 SOGA1O94964 1423 aa10.34□□□□□ -0.75
SEM1-211ENST00000493858 ZNF608Q9ULD9 1512 aaPredicted RBP10.34□□□□□ -0.75
SEM1-211ENST00000493858 CHD1O14646 1710 aa10.33□□□□□ -0.76
SEM1-211ENST00000493858 GRIN2BQ13224 1484 aa10.31□□□□□ -0.76
SEM1-211ENST00000493858 WRNQ14191 1432 aaPredicted RBP eCLIP10.29□□□□□ -0.76
SEM1-211ENST00000493858 SYNJ1O43426 1573 aa10.29□□□□□ -0.76
SEM1-211ENST00000493858 ERICH3Q5RHP9 1530 aa10.28□□□□□ -0.76
SEM1-211ENST00000493858 CLASP1Q7Z460 1538 aa10.27□□□□□ -0.77
SEM1-211ENST00000493858 OSCARQ8IYS5 282 aa10.27□□□□□ -0.77
SEM1-211ENST00000493858 RAD54L2Q9Y4B4 1467 aa10.26□□□□□ -0.77
SEM1-211ENST00000493858 SYNJ2O15056 1496 aa10.26□□□□□ -0.77
SEM1-211ENST00000493858 GAPVD1Q14C86 1478 aa10.26□□□□□ -0.77
SEM1-211ENST00000493858 ADAMTS12P58397 1594 aa10.25□□□□□ -0.77
SEM1-211ENST00000493858 SUPT5HO00267 1087 aaKnown RBP10.25□□□□□ -0.77
SEM1-211ENST00000493858 AQRO60306 1485 aaKnown RBP eCLIP10.24□□□□□ -0.77
SEM1-211ENST00000493858 SNAPC4Q5SXM2 1469 aa10.23□□□□□ -0.77
SEM1-211ENST00000493858 RIMBP3CA6NJZ7 1639 aa10.22□□□□□ -0.77
SEM1-211ENST00000493858 RIMBP3BA6NNM3 1639 aa10.22□□□□□ -0.77
SEM1-211ENST00000493858 RIMBP3Q9UFD9 1639 aa10.22□□□□□ -0.77
SEM1-211ENST00000493858 CUL7Q14999 1698 aa10.21□□□□□ -0.77
SEM1-211ENST00000493858 SHROOM2Q13796 1616 aa10.19□□□□□ -0.78
SEM1-211ENST00000493858 FHAD1B1AJZ9 1412 aa10.19□□□□□ -0.78
SEM1-211ENST00000493858 TDRD9Q8NDG6 1382 aaKnown RBP10.17□□□□□ -0.78
SEM1-211ENST00000493858 ARHGEF11O15085 1522 aa10.17□□□□□ -0.78
SEM1-211ENST00000493858 NUP160Q12769 1436 aa10.17□□□□□ -0.78
SEM1-211ENST00000493858 GRIN2AQ12879 1464 aa10.16□□□□□ -0.78
SEM1-211ENST00000493858 KIF27Q86VH2 1401 aa10.11□□□□□ -0.79
SEM1-211ENST00000493858 CEP170Q5SW79 1584 aa10.11□□□□□ -0.79
SEM1-211ENST00000493858 RUSC2Q8N2Y8 1516 aa10.09□□□□□ -0.79
SEM1-211ENST00000493858 ARAP1Q96P48 1450 aa10.07□□□□□ -0.8
SEM1-211ENST00000493858 CHMP7Q8WUX9 453 aaPredicted RBP10.07□□□□□ -0.8
SEM1-211ENST00000493858 KIAA0586Q9BVV6 1533 aa10.03□□□□□ -0.8
SEM1-211ENST00000493858 IGF1RP08069 1367 aa10.03□□□□□ -0.8
SEM1-211ENST00000493858 EEA1Q15075 1411 aa10□□□□□ -0.81
SEM1-211ENST00000493858 CTTNBP2Q8WZ74 1663 aa9.99□□□□□ -0.81
SEM1-211ENST00000493858 IQGAP2Q13576 1575 aa9.97□□□□□ -0.81
SEM1-211ENST00000493858 RAPGEF2Q9Y4G8 1499 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms