RNA–Protein interactions for RNA: ENST00000493782.5

U2SURP-215, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 1 (best)

Gene U2SURP, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-215ENST00000493782 NISCHQ9Y2I1 1504 aa29.73■■■□□ 2.35
U2SURP-215ENST00000493782 ABCC9O60706 1549 aa27.58■■■□□ 2.01
U2SURP-215ENST00000493782 CCDC180Q9P1Z9 1646 aa27■■□□□ 1.91
U2SURP-215ENST00000493782 DNAJC5BQ9UF47 199 aa26.32■■□□□ 1.8
U2SURP-215ENST00000493782 RB1CC1Q8TDY2 1594 aa25.93■■□□□ 1.74
U2SURP-215ENST00000493782 NACADO15069 1562 aa25.56■■□□□ 1.68
U2SURP-215ENST00000493782 UNC13AQ9UPW8 1703 aa25.52■■□□□ 1.68
U2SURP-215ENST00000493782 PABPN1Q86U42 306 aaKnown RBP eCLIP25.51■■□□□ 1.67
U2SURP-215ENST00000493782 BICRAQ9NZM4 1560 aa25.28■■□□□ 1.64
U2SURP-215ENST00000493782 DCAF8L2P0C7V8 631 aa25.27■■□□□ 1.64
U2SURP-215ENST00000493782 MYO15BQ96JP2 1530 aa24.96■■□□□ 1.59
U2SURP-215ENST00000493782 CC2D2AQ9P2K1 1620 aa24.89■■□□□ 1.57
U2SURP-215ENST00000493782 CECR2Q9BXF3 1484 aa24.85■■□□□ 1.57
U2SURP-215ENST00000493782 SHROOM4Q9ULL8 1493 aa24.71■■□□□ 1.55
U2SURP-215ENST00000493782 EIF4G1Q04637 1599 aaKnown RBP24.68■■□□□ 1.54
U2SURP-215ENST00000493782 SCRIBQ14160 1630 aa24.65■■□□□ 1.54
U2SURP-215ENST00000493782 ZCCHC6Q5VYS8 1495 aaKnown RBP24.57■■□□□ 1.52
U2SURP-215ENST00000493782 DNAJC5Q9H3Z4 198 aa24.48■■□□□ 1.51
U2SURP-215ENST00000493782 DCAF1Q9Y4B6 1507 aa24.45■■□□□ 1.51
U2SURP-215ENST00000493782 CUX2O14529 1486 aa23.91■■□□□ 1.42
U2SURP-215ENST00000493782 ERCC6Q03468 1493 aa23.81■■□□□ 1.4
U2SURP-215ENST00000493782 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
U2SURP-215ENST00000493782 NESP48681 1621 aa23.55■■□□□ 1.36
U2SURP-215ENST00000493782 ATAD2BQ9ULI0 1458 aa23.48■■□□□ 1.35
U2SURP-215ENST00000493782 THOC2Q8NI27 1593 aaKnown RBP23.48■■□□□ 1.35
U2SURP-215ENST00000493782 HMGXB3Q12766 1538 aa23.43■■□□□ 1.34
U2SURP-215ENST00000493782 SMARCA4P51532 1647 aa23.4■■□□□ 1.34
U2SURP-215ENST00000493782 SMARCA2P51531 1590 aa23.38■■□□□ 1.33
U2SURP-215ENST00000493782 KIF21AQ7Z4S6 1674 aa23.3■■□□□ 1.32
U2SURP-215ENST00000493782 TRIM41Q8WV44 630 aa23.29■■□□□ 1.32
U2SURP-215ENST00000493782 BAZ1BQ9UIG0 1483 aaKnown RBP23.24■■□□□ 1.31
U2SURP-215ENST00000493782 LAMC3Q9Y6N6 1575 aa23.21■■□□□ 1.31
U2SURP-215ENST00000493782 BAZ1AQ9NRL2 1556 aaPredicted RBP23.11■■□□□ 1.29
U2SURP-215ENST00000493782 PEG3Q9GZU2 1588 aa23.1■■□□□ 1.29
U2SURP-215ENST00000493782 PDS5BQ9NTI5 1447 aa23■■□□□ 1.27
U2SURP-215ENST00000493782 MROH2BQ7Z745 1585 aa22.97■■□□□ 1.27
U2SURP-215ENST00000493782 WDR62O43379 1518 aa22.94■■□□□ 1.26
U2SURP-215ENST00000493782 MRC2Q9UBG0 1479 aa22.94■■□□□ 1.26
U2SURP-215ENST00000493782 CADPSQ9ULU8 1353 aa22.82■■□□□ 1.24
U2SURP-215ENST00000493782 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
U2SURP-215ENST00000493782 WIZO95785 1651 aa22.71■■□□□ 1.23
U2SURP-215ENST00000493782 FANCD2Q9BXW9 1451 aa22.65■■□□□ 1.22
U2SURP-215ENST00000493782 RIMBP3CA6NJZ7 1639 aa22.63■■□□□ 1.21
U2SURP-215ENST00000493782 RIMBP3BA6NNM3 1639 aa22.63■■□□□ 1.21
U2SURP-215ENST00000493782 RIMBP3Q9UFD9 1639 aa22.63■■□□□ 1.21
U2SURP-215ENST00000493782 OSCARQ8IYS5 282 aa22.6■■□□□ 1.21
U2SURP-215ENST00000493782 AEBP2Q6ZN18 517 aaPredicted RBP22.58■■□□□ 1.21
U2SURP-215ENST00000493782 URB2Q14146 1524 aaKnown RBP22.55■■□□□ 1.2
U2SURP-215ENST00000493782 CFTRP13569 1480 aa22.48■■□□□ 1.19
U2SURP-215ENST00000493782 ARHGEF11O15085 1522 aa22.45■■□□□ 1.18
U2SURP-215ENST00000493782 ZNF608Q9ULD9 1512 aaPredicted RBP22.38■■□□□ 1.17
U2SURP-215ENST00000493782 PRDM2Q13029 1718 aa22.37■■□□□ 1.17
U2SURP-215ENST00000493782 TOP2AP11388 1531 aaKnown RBP22.32■■□□□ 1.16
U2SURP-215ENST00000493782 EIF4G3O43432 1585 aaKnown RBP22.29■■□□□ 1.16
U2SURP-215ENST00000493782 CHD1O14646 1710 aa22.26■■□□□ 1.15
U2SURP-215ENST00000493782 IFT140Q96RY7 1462 aa22.26■■□□□ 1.15
U2SURP-215ENST00000493782 ARAP1Q96P48 1450 aa22.21■■□□□ 1.15
U2SURP-215ENST00000493782 RSF1Q96T23 1441 aaPredicted RBP22.2■■□□□ 1.14
U2SURP-215ENST00000493782 CYB5RLQ6IPT4 315 aa22.19■■□□□ 1.14
U2SURP-215ENST00000493782 TOPBP1Q92547 1522 aa22.18■■□□□ 1.14
U2SURP-215ENST00000493782 TRHP20396 242 aaPredicted RBP22.15■■□□□ 1.14
U2SURP-215ENST00000493782 DNMBPQ6XZF7 1577 aa22.06■■□□□ 1.12
U2SURP-215ENST00000493782 TARBP1Q13395 1621 aaKnown RBP22.06■■□□□ 1.12
U2SURP-215ENST00000493782 AQRO60306 1485 aaKnown RBP eCLIP22.04■■□□□ 1.128e-11■■■■■ 33.2
U2SURP-215ENST00000493782 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
U2SURP-215ENST00000493782 FBLN2P98095 1184 aa21.96■■□□□ 1.11
U2SURP-215ENST00000493782 ABCC8Q09428 1581 aa21.94■■□□□ 1.1
U2SURP-215ENST00000493782 POLA1P09884 1462 aaPredicted RBP21.92■■□□□ 1.1
U2SURP-215ENST00000493782 CLASP1Q7Z460 1538 aa21.9■■□□□ 1.1
U2SURP-215ENST00000493782 RAD54L2Q9Y4B4 1467 aa21.87■■□□□ 1.09
U2SURP-215ENST00000493782 SNAPC4Q5SXM2 1469 aa21.85■■□□□ 1.09
U2SURP-215ENST00000493782 TDRD9Q8NDG6 1382 aaKnown RBP21.8■■□□□ 1.08
U2SURP-215ENST00000493782 SYNJ1O43426 1573 aa21.79■■□□□ 1.08
U2SURP-215ENST00000493782 SOGA1O94964 1423 aa21.72■■□□□ 1.07
U2SURP-215ENST00000493782 FGD5Q6ZNL6 1462 aa21.71■■□□□ 1.07
U2SURP-215ENST00000493782 WDR97A6NE52 1622 aa21.7■■□□□ 1.06
U2SURP-215ENST00000493782 MAGI1Q96QZ7 1491 aaPredicted RBP21.69■■□□□ 1.06
U2SURP-215ENST00000493782 PBRM1Q86U86 1689 aa21.67■■□□□ 1.06
U2SURP-215ENST00000493782 GAPVD1Q14C86 1478 aa21.66■■□□□ 1.06
U2SURP-215ENST00000493782 CHMP7Q8WUX9 453 aaPredicted RBP21.64■■□□□ 1.05
U2SURP-215ENST00000493782 SYNJ2O15056 1496 aa21.64■■□□□ 1.05
U2SURP-215ENST00000493782 GRIN2BQ13224 1484 aa21.63■■□□□ 1.05
U2SURP-215ENST00000493782 CUX1P39880 1505 aa21.61■■□□□ 1.05
U2SURP-215ENST00000493782 ERCC6L2Q5T890 1561 aa21.59■■□□□ 1.05
U2SURP-215ENST00000493782 ABCA5Q8WWZ7 1642 aa21.5■■□□□ 1.03
U2SURP-215ENST00000493782 KIF13AQ9H1H9 1805 aa21.47■■□□□ 1.03
U2SURP-215ENST00000493782 CEP170Q5SW79 1584 aa21.43■■□□□ 1.02
U2SURP-215ENST00000493782 ADAMTS12P58397 1594 aa21.4■■□□□ 1.02
U2SURP-215ENST00000493782 GRIN2AQ12879 1464 aa21.39■■□□□ 1.02
U2SURP-215ENST00000493782 ABCA10Q8WWZ4 1543 aa21.37■■□□□ 1.01
U2SURP-215ENST00000493782 SHROOM2Q13796 1616 aa21.36■■□□□ 1.01
U2SURP-215ENST00000493782 NUP160Q12769 1436 aa21.31■■□□□ 1
U2SURP-215ENST00000493782 SUPT5HO00267 1087 aaKnown RBP21.18■□□□□ 0.98
U2SURP-215ENST00000493782 DIP2BQ9P265 1576 aa21.18■□□□□ 0.98
U2SURP-215ENST00000493782 FHAD1B1AJZ9 1412 aa21.16■□□□□ 0.98
U2SURP-215ENST00000493782 PRG4Q92954 1404 aaPredicted RBP21.15■□□□□ 0.98
U2SURP-215ENST00000493782 KDM6BO15054 1643 aa21.14■□□□□ 0.97
U2SURP-215ENST00000493782 ABCC10Q5T3U5 1492 aa21.13■□□□□ 0.97
U2SURP-215ENST00000493782 BIVM-ERCC5R4GMW8 1640 aa21.13■□□□□ 0.97
U2SURP-215ENST00000493782 RUSC2Q8N2Y8 1516 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms