RNA–Protein interactions for RNA: ENST00000493503.1

IFNAR1-203, Transcript of interferon alpha and beta receptor subunit 1, humanhuman

TSL 5

Gene IFNAR1, Length 250 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFNAR1-203ENST00000493503 NISCHQ9Y2I1 1504 aa33.17■■■□□ 2.9
IFNAR1-203ENST00000493503 ABCC9O60706 1549 aa30.91■■■□□ 2.54
IFNAR1-203ENST00000493503 DNAJC5BQ9UF47 199 aa29.91■■■□□ 2.38
IFNAR1-203ENST00000493503 CCDC180Q9P1Z9 1646 aa29.89■■■□□ 2.38
IFNAR1-203ENST00000493503 RB1CC1Q8TDY2 1594 aa28.91■■■□□ 2.22
IFNAR1-203ENST00000493503 PABPN1Q86U42 306 aaKnown RBP eCLIP28.62■■■□□ 2.17
IFNAR1-203ENST00000493503 NACADO15069 1562 aa28.46■■■□□ 2.15
IFNAR1-203ENST00000493503 UNC13AQ9UPW8 1703 aa28.35■■■□□ 2.13
IFNAR1-203ENST00000493503 BICRAQ9NZM4 1560 aa28.22■■■□□ 2.11
IFNAR1-203ENST00000493503 DCAF8L2P0C7V8 631 aa28.12■■■□□ 2.09
IFNAR1-203ENST00000493503 DNAJC5Q9H3Z4 198 aa28.05■■■□□ 2.08
IFNAR1-203ENST00000493503 CECR2Q9BXF3 1484 aa27.9■■■□□ 2.06
IFNAR1-203ENST00000493503 CC2D2AQ9P2K1 1620 aa27.86■■■□□ 2.05
IFNAR1-203ENST00000493503 MYO15BQ96JP2 1530 aa27.73■■■□□ 2.03
IFNAR1-203ENST00000493503 ZCCHC6Q5VYS8 1495 aaKnown RBP27.7■■■□□ 2.03
IFNAR1-203ENST00000493503 SHROOM4Q9ULL8 1493 aa27.57■■■□□ 2
IFNAR1-203ENST00000493503 EIF4G1Q04637 1599 aaKnown RBP27.56■■■□□ 2
IFNAR1-203ENST00000493503 DCAF1Q9Y4B6 1507 aa27.41■■□□□ 1.98
IFNAR1-203ENST00000493503 SCRIBQ14160 1630 aa27.26■■□□□ 1.95
IFNAR1-203ENST00000493503 CUX2O14529 1486 aa26.95■■□□□ 1.91
IFNAR1-203ENST00000493503 ERCC6Q03468 1493 aa26.68■■□□□ 1.86
IFNAR1-203ENST00000493503 TRIM41Q8WV44 630 aa26.45■■□□□ 1.82
IFNAR1-203ENST00000493503 NESP48681 1621 aa26.32■■□□□ 1.8
IFNAR1-203ENST00000493503 NCAPD3P42695 1498 aa26.31■■□□□ 1.8
IFNAR1-203ENST00000493503 THOC2Q8NI27 1593 aaKnown RBP26.22■■□□□ 1.79
IFNAR1-203ENST00000493503 ATAD2BQ9ULI0 1458 aa26.12■■□□□ 1.77
IFNAR1-203ENST00000493503 HMGXB3Q12766 1538 aa26.04■■□□□ 1.76
IFNAR1-203ENST00000493503 SMARCA2P51531 1590 aa26.01■■□□□ 1.75
IFNAR1-203ENST00000493503 KIF21AQ7Z4S6 1674 aa25.92■■□□□ 1.74
IFNAR1-203ENST00000493503 SMARCA4P51532 1647 aa25.87■■□□□ 1.73
IFNAR1-203ENST00000493503 LAMC3Q9Y6N6 1575 aa25.86■■□□□ 1.73
IFNAR1-203ENST00000493503 BAZ1BQ9UIG0 1483 aaKnown RBP25.8■■□□□ 1.72
IFNAR1-203ENST00000493503 BAZ1AQ9NRL2 1556 aaPredicted RBP25.71■■□□□ 1.71
IFNAR1-203ENST00000493503 PDS5BQ9NTI5 1447 aa25.71■■□□□ 1.71
IFNAR1-203ENST00000493503 MRC2Q9UBG0 1479 aa25.61■■□□□ 1.69
IFNAR1-203ENST00000493503 WDR62O43379 1518 aa25.6■■□□□ 1.69
IFNAR1-203ENST00000493503 MROH2BQ7Z745 1585 aa25.6■■□□□ 1.69
IFNAR1-203ENST00000493503 PEG3Q9GZU2 1588 aa25.6■■□□□ 1.69
IFNAR1-203ENST00000493503 OSCARQ8IYS5 282 aa25.52■■□□□ 1.68
IFNAR1-203ENST00000493503 CADPSQ9ULU8 1353 aa25.45■■□□□ 1.67
IFNAR1-203ENST00000493503 RIMBP3CA6NJZ7 1639 aa25.42■■□□□ 1.66
IFNAR1-203ENST00000493503 RIMBP3BA6NNM3 1639 aa25.42■■□□□ 1.66
IFNAR1-203ENST00000493503 RIMBP3Q9UFD9 1639 aa25.42■■□□□ 1.66
IFNAR1-203ENST00000493503 RSF1Q96T23 1441 aaPredicted RBP25.37■■□□□ 1.65
IFNAR1-203ENST00000493503 WIZO95785 1651 aa25.37■■□□□ 1.65
IFNAR1-203ENST00000493503 CEP164Q9UPV0 1460 aa25.3■■□□□ 1.64
IFNAR1-203ENST00000493503 ARHGEF11O15085 1522 aa25.22■■□□□ 1.63
IFNAR1-203ENST00000493503 FANCD2Q9BXW9 1451 aa25.21■■□□□ 1.63
IFNAR1-203ENST00000493503 URB2Q14146 1524 aaKnown RBP25.12■■□□□ 1.61
IFNAR1-203ENST00000493503 TOP2AP11388 1531 aaKnown RBP25.1■■□□□ 1.61
IFNAR1-203ENST00000493503 SUPT5HO00267 1087 aaKnown RBP25.05■■□□□ 1.6
IFNAR1-203ENST00000493503 TRHP20396 242 aaPredicted RBP25.05■■□□□ 1.6
IFNAR1-203ENST00000493503 CYB5RLQ6IPT4 315 aa25.04■■□□□ 1.6
IFNAR1-203ENST00000493503 CFTRP13569 1480 aa24.99■■□□□ 1.59
IFNAR1-203ENST00000493503 ZNF608Q9ULD9 1512 aaPredicted RBP24.98■■□□□ 1.59
IFNAR1-203ENST00000493503 AEBP2Q6ZN18 517 aaPredicted RBP24.98■■□□□ 1.59
IFNAR1-203ENST00000493503 ARAP1Q96P48 1450 aa24.94■■□□□ 1.58
IFNAR1-203ENST00000493503 IFT140Q96RY7 1462 aa24.82■■□□□ 1.56
IFNAR1-203ENST00000493503 CCDC88BA6NC98 1476 aa24.77■■□□□ 1.56
IFNAR1-203ENST00000493503 EIF4G3O43432 1585 aaKnown RBP24.77■■□□□ 1.56
IFNAR1-203ENST00000493503 CHD1O14646 1710 aa24.77■■□□□ 1.56
IFNAR1-203ENST00000493503 PRDM2Q13029 1718 aa24.65■■□□□ 1.54
IFNAR1-203ENST00000493503 TOPBP1Q92547 1522 aa24.64■■□□□ 1.53
IFNAR1-203ENST00000493503 AQRO60306 1485 aaKnown RBP eCLIP24.59■■□□□ 1.53
IFNAR1-203ENST00000493503 FBLN2P98095 1184 aa24.56■■□□□ 1.52
IFNAR1-203ENST00000493503 TARBP1Q13395 1621 aaKnown RBP24.51■■□□□ 1.51
IFNAR1-203ENST00000493503 CLASP1Q7Z460 1538 aa24.45■■□□□ 1.51
IFNAR1-203ENST00000493503 DNMBPQ6XZF7 1577 aa24.44■■□□□ 1.5
IFNAR1-203ENST00000493503 ABCC8Q09428 1581 aa24.39■■□□□ 1.5
IFNAR1-203ENST00000493503 POLA1P09884 1462 aaPredicted RBP24.33■■□□□ 1.49
IFNAR1-203ENST00000493503 SNAPC4Q5SXM2 1469 aa24.32■■□□□ 1.48
IFNAR1-203ENST00000493503 RAD54L2Q9Y4B4 1467 aa24.29■■□□□ 1.48
IFNAR1-203ENST00000493503 SYNJ1O43426 1573 aa24.28■■□□□ 1.48
IFNAR1-203ENST00000493503 TDRD9Q8NDG6 1382 aaKnown RBP24.28■■□□□ 1.48
IFNAR1-203ENST00000493503 GAPVD1Q14C86 1478 aa24.23■■□□□ 1.47
IFNAR1-203ENST00000493503 CHMP7Q8WUX9 453 aaPredicted RBP24.18■■□□□ 1.46
IFNAR1-203ENST00000493503 ILDR1Q86SU0 546 aaPredicted RBP24.15■■□□□ 1.46
IFNAR1-203ENST00000493503 SOGA1O94964 1423 aa24.15■■□□□ 1.46
IFNAR1-203ENST00000493503 MAGI1Q96QZ7 1491 aaPredicted RBP24.14■■□□□ 1.46
IFNAR1-203ENST00000493503 SYNJ2O15056 1496 aa24.1■■□□□ 1.45
IFNAR1-203ENST00000493503 WDR97A6NE52 1622 aa24.08■■□□□ 1.45
IFNAR1-203ENST00000493503 ERCC6L2Q5T890 1561 aa24.08■■□□□ 1.44
IFNAR1-203ENST00000493503 GRIN2BQ13224 1484 aa24.05■■□□□ 1.44
IFNAR1-203ENST00000493503 FGD5Q6ZNL6 1462 aa24.04■■□□□ 1.44
IFNAR1-203ENST00000493503 KIF13AQ9H1H9 1805 aa24■■□□□ 1.43
IFNAR1-203ENST00000493503 CUX1P39880 1505 aa24■■□□□ 1.43
IFNAR1-203ENST00000493503 WRNQ14191 1432 aaPredicted RBP eCLIP23.95■■□□□ 1.42
IFNAR1-203ENST00000493503 PBRM1Q86U86 1689 aa23.94■■□□□ 1.42
IFNAR1-203ENST00000493503 KDM4FA0A1W2PPD8 638 aa23.89■■□□□ 1.41
IFNAR1-203ENST00000493503 BIVM-ERCC5R4GMW8 1640 aa23.88■■□□□ 1.41
IFNAR1-203ENST00000493503 TOP2BQ02880 1626 aa23.87■■□□□ 1.41
IFNAR1-203ENST00000493503 CEP170Q5SW79 1584 aa23.86■■□□□ 1.41
IFNAR1-203ENST00000493503 ABCA5Q8WWZ7 1642 aa23.78■■□□□ 1.4
IFNAR1-203ENST00000493503 GRIN2AQ12879 1464 aa23.77■■□□□ 1.4
IFNAR1-203ENST00000493503 SHROOM2Q13796 1616 aa23.76■■□□□ 1.39
IFNAR1-203ENST00000493503 NUP160Q12769 1436 aa23.73■■□□□ 1.39
IFNAR1-203ENST00000493503 ABCC10Q5T3U5 1492 aa23.69■■□□□ 1.38
IFNAR1-203ENST00000493503 FAM69CQ0P6D2 419 aa23.69■■□□□ 1.38
IFNAR1-203ENST00000493503 ABCA10Q8WWZ4 1543 aa23.68■■□□□ 1.38
IFNAR1-203ENST00000493503 KDM6BO15054 1643 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms