RNA–Protein interactions for RNA: ENST00000493213.1

CDK16-207, Transcript of cyclin dependent kinase 16, humanhuman

TSL 3

Gene CDK16, Length 866 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-207ENST00000493213 AEBP2Q6ZN18 517 aaPredicted RBP28.27■■■□□ 2.12
CDK16-207ENST00000493213 CHIC1Q5VXU3 224 aa26.82■■□□□ 1.88
CDK16-207ENST00000493213 NISCHQ9Y2I1 1504 aa26.24■■□□□ 1.79
CDK16-207ENST00000493213 SENP3Q9H4L4 574 aaPredicted RBP24.04■■□□□ 1.44
CDK16-207ENST00000493213 PHF23Q9BUL5 403 aaPredicted RBP23.74■■□□□ 1.39
CDK16-207ENST00000493213 CCDC180Q9P1Z9 1646 aa23.56■■□□□ 1.36
CDK16-207ENST00000493213 ABCC9O60706 1549 aa23.38■■□□□ 1.33
CDK16-207ENST00000493213 FOXD1Q16676 465 aa22.55■■□□□ 1.2
CDK16-207ENST00000493213 RB1CC1Q8TDY2 1594 aa22.4■■□□□ 1.18
CDK16-207ENST00000493213 NACADO15069 1562 aa22.29■■□□□ 1.16
CDK16-207ENST00000493213 DNAJC5BQ9UF47 199 aa22.23■■□□□ 1.15
CDK16-207ENST00000493213 MYO15BQ96JP2 1530 aa22.1■■□□□ 1.13
CDK16-207ENST00000493213 DCAF8L2P0C7V8 631 aa21.99■■□□□ 1.11
CDK16-207ENST00000493213 DCAF1Q9Y4B6 1507 aa21.8■■□□□ 1.08
CDK16-207ENST00000493213 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
CDK16-207ENST00000493213 PABPN1Q86U42 306 aaKnown RBP eCLIP21.75■■□□□ 1.07
CDK16-207ENST00000493213 ZCCHC6Q5VYS8 1495 aaKnown RBP21.75■■□□□ 1.07
CDK16-207ENST00000493213 BICRAQ9NZM4 1560 aa21.69■■□□□ 1.06
CDK16-207ENST00000493213 PLPPR3Q6T4P5 718 aa21.65■■□□□ 1.06
CDK16-207ENST00000493213 SHROOM4Q9ULL8 1493 aa21.6■■□□□ 1.05
CDK16-207ENST00000493213 POTEDQ86YR6 584 aa21.43■■□□□ 1.02
CDK16-207ENST00000493213 SCRIBQ14160 1630 aa21.31■■□□□ 1
CDK16-207ENST00000493213 CC2D2AQ9P2K1 1620 aa21.17■□□□□ 0.98
CDK16-207ENST00000493213 EIF4G1Q04637 1599 aaKnown RBP21.16■□□□□ 0.98
CDK16-207ENST00000493213 MSH5O43196 834 aa21.15■□□□□ 0.98
CDK16-207ENST00000493213 CECR2Q9BXF3 1484 aa21.13■□□□□ 0.97
CDK16-207ENST00000493213 PIAS4Q8N2W9 510 aaPredicted RBP20.92■□□□□ 0.94
CDK16-207ENST00000493213 PPP6R1Q9UPN7 881 aa20.86■□□□□ 0.93
CDK16-207ENST00000493213 ADRA2BP18089 450 aa20.84■□□□□ 0.93
CDK16-207ENST00000493213 NCAPD3P42695 1498 aa20.59■□□□□ 0.89
CDK16-207ENST00000493213 DNAJC5Q9H3Z4 198 aa20.51■□□□□ 0.87
CDK16-207ENST00000493213 ATAD2BQ9ULI0 1458 aa20.47■□□□□ 0.87
CDK16-207ENST00000493213 SMARCA2P51531 1590 aa20.46■□□□□ 0.87
CDK16-207ENST00000493213 HMGXB3Q12766 1538 aa20.43■□□□□ 0.86
CDK16-207ENST00000493213 SMARCA4P51532 1647 aa20.42■□□□□ 0.86
CDK16-207ENST00000493213 BAZ1AQ9NRL2 1556 aaPredicted RBP20.39■□□□□ 0.85
CDK16-207ENST00000493213 PEG3Q9GZU2 1588 aa20.33■□□□□ 0.84
CDK16-207ENST00000493213 CUX2O14529 1486 aa20.3■□□□□ 0.84
CDK16-207ENST00000493213 BAZ1BQ9UIG0 1483 aaKnown RBP20.25■□□□□ 0.83
CDK16-207ENST00000493213 ERCC6Q03468 1493 aa20.24■□□□□ 0.83
CDK16-207ENST00000493213 MROH2BQ7Z745 1585 aa20.15■□□□□ 0.82
CDK16-207ENST00000493213 LAMC3Q9Y6N6 1575 aa20.09■□□□□ 0.81
CDK16-207ENST00000493213 NESP48681 1621 aa20.08■□□□□ 0.8
CDK16-207ENST00000493213 PDS5BQ9NTI5 1447 aa20■□□□□ 0.79
CDK16-207ENST00000493213 CADPSQ9ULU8 1353 aa19.94■□□□□ 0.78
CDK16-207ENST00000493213 THOC2Q8NI27 1593 aaKnown RBP19.93■□□□□ 0.78
CDK16-207ENST00000493213 WIZO95785 1651 aa19.87■□□□□ 0.77
CDK16-207ENST00000493213 KIF21AQ7Z4S6 1674 aa19.82■□□□□ 0.76
CDK16-207ENST00000493213 RSF1Q96T23 1441 aaPredicted RBP19.79■□□□□ 0.76
CDK16-207ENST00000493213 MRC2Q9UBG0 1479 aa19.77■□□□□ 0.76
CDK16-207ENST00000493213 CFTRP13569 1480 aa19.73■□□□□ 0.75
CDK16-207ENST00000493213 WDR62O43379 1518 aa19.72■□□□□ 0.75
CDK16-207ENST00000493213 TOP2AP11388 1531 aaKnown RBP19.71■□□□□ 0.75
CDK16-207ENST00000493213 CEP164Q9UPV0 1460 aa19.68■□□□□ 0.74
CDK16-207ENST00000493213 FANCD2Q9BXW9 1451 aa19.66■□□□□ 0.74
CDK16-207ENST00000493213 TRIM41Q8WV44 630 aa19.51■□□□□ 0.71
CDK16-207ENST00000493213 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
CDK16-207ENST00000493213 URB2Q14146 1524 aaKnown RBP19.46■□□□□ 0.71
CDK16-207ENST00000493213 PRDM2Q13029 1718 aa19.45■□□□□ 0.7
CDK16-207ENST00000493213 ABCC8Q09428 1581 aa19.37■□□□□ 0.69
CDK16-207ENST00000493213 OSCARQ8IYS5 282 aa19.35■□□□□ 0.69
CDK16-207ENST00000493213 IFT140Q96RY7 1462 aa19.33■□□□□ 0.68
CDK16-207ENST00000493213 TOPBP1Q92547 1522 aa19.29■□□□□ 0.68
CDK16-207ENST00000493213 DNMBPQ6XZF7 1577 aa19.23■□□□□ 0.67
CDK16-207ENST00000493213 SCAF1Q9H7N4 1312 aaKnown RBP19.21■□□□□ 0.67
CDK16-207ENST00000493213 ZNF608Q9ULD9 1512 aaPredicted RBP19.19■□□□□ 0.66
CDK16-207ENST00000493213 MAPK8IP2Q13387 824 aaPredicted RBP19.18■□□□□ 0.66
CDK16-207ENST00000493213 TARBP1Q13395 1621 aaKnown RBP19.11■□□□□ 0.65
CDK16-207ENST00000493213 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
CDK16-207ENST00000493213 POLA1P09884 1462 aaPredicted RBP19.09■□□□□ 0.65
CDK16-207ENST00000493213 WDR97A6NE52 1622 aa19.05■□□□□ 0.64
CDK16-207ENST00000493213 DMRT2Q9Y5R5 561 aa19.04■□□□□ 0.64
CDK16-207ENST00000493213 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.64
CDK16-207ENST00000493213 RIMBP3CA6NJZ7 1639 aa19.03■□□□□ 0.64
CDK16-207ENST00000493213 RIMBP3BA6NNM3 1639 aa19.03■□□□□ 0.64
CDK16-207ENST00000493213 RIMBP3Q9UFD9 1639 aa19.03■□□□□ 0.64
CDK16-207ENST00000493213 SOGA1O94964 1423 aa19.02■□□□□ 0.64
CDK16-207ENST00000493213 PPP4R3CPQ6ZMV5 832 aa18.99■□□□□ 0.63
CDK16-207ENST00000493213 ARHGEF11O15085 1522 aa18.97■□□□□ 0.63
CDK16-207ENST00000493213 RAD54L2Q9Y4B4 1467 aa18.96■□□□□ 0.63
CDK16-207ENST00000493213 FGD5Q6ZNL6 1462 aa18.95■□□□□ 0.62
CDK16-207ENST00000493213 CUX1P39880 1505 aa18.94■□□□□ 0.62
CDK16-207ENST00000493213 TDRD9Q8NDG6 1382 aaKnown RBP18.93■□□□□ 0.62
CDK16-207ENST00000493213 CHD1O14646 1710 aa18.91■□□□□ 0.62
CDK16-207ENST00000493213 MAGI1Q96QZ7 1491 aaPredicted RBP18.9■□□□□ 0.62
CDK16-207ENST00000493213 GRIN2BQ13224 1484 aa18.88■□□□□ 0.61
CDK16-207ENST00000493213 FBLN2P98095 1184 aa18.87■□□□□ 0.61
CDK16-207ENST00000493213 SNAPC4Q5SXM2 1469 aa18.84■□□□□ 0.61
CDK16-207ENST00000493213 CHMP7Q8WUX9 453 aaPredicted RBP18.83■□□□□ 0.6
CDK16-207ENST00000493213 SUPT5HO00267 1087 aaKnown RBP18.82■□□□□ 0.6
CDK16-207ENST00000493213 ABCA10Q8WWZ4 1543 aa18.81■□□□□ 0.6
CDK16-207ENST00000493213 SYNJ2O15056 1496 aa18.81■□□□□ 0.6
CDK16-207ENST00000493213 CYB5RLQ6IPT4 315 aa18.8■□□□□ 0.6
CDK16-207ENST00000493213 GAPVD1Q14C86 1478 aa18.79■□□□□ 0.6
CDK16-207ENST00000493213 SYNJ1O43426 1573 aa18.79■□□□□ 0.6
CDK16-207ENST00000493213 CLASP1Q7Z460 1538 aa18.79■□□□□ 0.6
CDK16-207ENST00000493213 ARAP1Q96P48 1450 aa18.77■□□□□ 0.59
CDK16-207ENST00000493213 WRNQ14191 1432 aaPredicted RBP eCLIP18.75■□□□□ 0.59
CDK16-207ENST00000493213 ABCA5Q8WWZ7 1642 aa18.73■□□□□ 0.59
CDK16-207ENST00000493213 PBRM1Q86U86 1689 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms