RNA–Protein interactions for RNA: ENST00000492639.5

RWDD3-205, Transcript of RWD domain containing 3, humanhuman

TSL 3

Gene RWDD3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RWDD3-205ENST00000492639 NISCHQ9Y2I1 1504 aa40.78■■■■■ 4.12
RWDD3-205ENST00000492639 ABCC9O60706 1549 aa36.89■■■■□ 3.5
RWDD3-205ENST00000492639 CCDC180Q9P1Z9 1646 aa36.65■■■■□ 3.46
RWDD3-205ENST00000492639 RB1CC1Q8TDY2 1594 aa35.04■■■■□ 3.2
RWDD3-205ENST00000492639 DCAF8L2P0C7V8 631 aa34.74■■■■□ 3.15
RWDD3-205ENST00000492639 NACADO15069 1562 aa34.74■■■■□ 3.15
RWDD3-205ENST00000492639 DNAJC5BQ9UF47 199 aa34.66■■■■□ 3.14
RWDD3-205ENST00000492639 PABPN1Q86U42 306 aaKnown RBP eCLIP34.36■■■■□ 3.09
RWDD3-205ENST00000492639 MYO15BQ96JP2 1530 aa34.16■■■■□ 3.06
RWDD3-205ENST00000492639 UNC13AQ9UPW8 1703 aa34.09■■■■□ 3.05
RWDD3-205ENST00000492639 BICRAQ9NZM4 1560 aa33.89■■■■□ 3.02
RWDD3-205ENST00000492639 ZCCHC6Q5VYS8 1495 aaKnown RBP33.74■■■□□ 2.99
RWDD3-205ENST00000492639 DCAF1Q9Y4B6 1507 aa33.66■■■□□ 2.98
RWDD3-205ENST00000492639 SHROOM4Q9ULL8 1493 aa33.53■■■□□ 2.96
RWDD3-205ENST00000492639 SCRIBQ14160 1630 aa33.42■■■□□ 2.94
RWDD3-205ENST00000492639 CC2D2AQ9P2K1 1620 aa33.26■■■□□ 2.91
RWDD3-205ENST00000492639 CECR2Q9BXF3 1484 aa33.25■■■□□ 2.91
RWDD3-205ENST00000492639 EIF4G1Q04637 1599 aaKnown RBP33.16■■■□□ 2.9
RWDD3-205ENST00000492639 NCAPD3P42695 1498 aa32.05■■■□□ 2.72
RWDD3-205ENST00000492639 DNAJC5Q9H3Z4 198 aa32.05■■■□□ 2.72
RWDD3-205ENST00000492639 ERCC6Q03468 1493 aa31.95■■■□□ 2.7
RWDD3-205ENST00000492639 ATAD2BQ9ULI0 1458 aa31.93■■■□□ 2.7
RWDD3-205ENST00000492639 SMARCA2P51531 1590 aa31.88■■■□□ 2.69
RWDD3-205ENST00000492639 CUX2O14529 1486 aa31.86■■■□□ 2.69
RWDD3-205ENST00000492639 SMARCA4P51532 1647 aa31.84■■■□□ 2.69
RWDD3-205ENST00000492639 HMGXB3Q12766 1538 aa31.8■■■□□ 2.68
RWDD3-205ENST00000492639 BAZ1AQ9NRL2 1556 aaPredicted RBP31.72■■■□□ 2.67
RWDD3-205ENST00000492639 BAZ1BQ9UIG0 1483 aaKnown RBP31.68■■■□□ 2.66
RWDD3-205ENST00000492639 NESP48681 1621 aa31.59■■■□□ 2.65
RWDD3-205ENST00000492639 PEG3Q9GZU2 1588 aa31.49■■■□□ 2.63
RWDD3-205ENST00000492639 MROH2BQ7Z745 1585 aa31.4■■■□□ 2.62
RWDD3-205ENST00000492639 LAMC3Q9Y6N6 1575 aa31.39■■■□□ 2.61
RWDD3-205ENST00000492639 PDS5BQ9NTI5 1447 aa31.29■■■□□ 2.6
RWDD3-205ENST00000492639 THOC2Q8NI27 1593 aaKnown RBP31.25■■■□□ 2.59
RWDD3-205ENST00000492639 KIF21AQ7Z4S6 1674 aa31.15■■■□□ 2.58
RWDD3-205ENST00000492639 CADPSQ9ULU8 1353 aa31.13■■■□□ 2.57
RWDD3-205ENST00000492639 WIZO95785 1651 aa31.02■■■□□ 2.56
RWDD3-205ENST00000492639 MRC2Q9UBG0 1479 aa30.96■■■□□ 2.55
RWDD3-205ENST00000492639 WDR62O43379 1518 aa30.83■■■□□ 2.53
RWDD3-205ENST00000492639 CEP164Q9UPV0 1460 aa30.83■■■□□ 2.53
RWDD3-205ENST00000492639 FANCD2Q9BXW9 1451 aa30.76■■■□□ 2.52
RWDD3-205ENST00000492639 RSF1Q96T23 1441 aaPredicted RBP30.73■■■□□ 2.51
RWDD3-205ENST00000492639 CFTRP13569 1480 aa30.69■■■□□ 2.5
RWDD3-205ENST00000492639 TRIM41Q8WV44 630 aa30.68■■■□□ 2.5
RWDD3-205ENST00000492639 TOP2AP11388 1531 aaKnown RBP30.64■■■□□ 2.5
RWDD3-205ENST00000492639 OSCARQ8IYS5 282 aa30.48■■■□□ 2.47
RWDD3-205ENST00000492639 URB2Q14146 1524 aaKnown RBP30.46■■■□□ 2.47
RWDD3-205ENST00000492639 CCDC88BA6NC98 1476 aa30.31■■■□□ 2.44
RWDD3-205ENST00000492639 PRDM2Q13029 1718 aa30.3■■■□□ 2.44
RWDD3-205ENST00000492639 IFT140Q96RY7 1462 aa30.21■■■□□ 2.43
RWDD3-205ENST00000492639 ABCC8Q09428 1581 aa30.13■■■□□ 2.41
RWDD3-205ENST00000492639 TOPBP1Q92547 1522 aa30.12■■■□□ 2.41
RWDD3-205ENST00000492639 ZNF608Q9ULD9 1512 aaPredicted RBP30.12■■■□□ 2.41
RWDD3-205ENST00000492639 DNMBPQ6XZF7 1577 aa30.01■■■□□ 2.39
RWDD3-205ENST00000492639 RIMBP3CA6NJZ7 1639 aa29.96■■■□□ 2.39
RWDD3-205ENST00000492639 RIMBP3BA6NNM3 1639 aa29.96■■■□□ 2.39
RWDD3-205ENST00000492639 RIMBP3Q9UFD9 1639 aa29.96■■■□□ 2.39
RWDD3-205ENST00000492639 EIF4G3O43432 1585 aaKnown RBP29.94■■■□□ 2.38
RWDD3-205ENST00000492639 AQRO60306 1485 aaKnown RBP eCLIP29.87■■■□□ 2.376e-9■■■■■ 45.1
RWDD3-205ENST00000492639 ARHGEF11O15085 1522 aa29.87■■■□□ 2.37
RWDD3-205ENST00000492639 FBLN2P98095 1184 aa29.87■■■□□ 2.37
RWDD3-205ENST00000492639 TARBP1Q13395 1621 aaKnown RBP29.82■■■□□ 2.36
RWDD3-205ENST00000492639 POLA1P09884 1462 aaPredicted RBP29.8■■■□□ 2.36
RWDD3-205ENST00000492639 CYB5RLQ6IPT4 315 aa29.78■■■□□ 2.36
RWDD3-205ENST00000492639 SOGA1O94964 1423 aa29.74■■■□□ 2.35
RWDD3-205ENST00000492639 CHD1O14646 1710 aa29.74■■■□□ 2.35
RWDD3-205ENST00000492639 RAD54L2Q9Y4B4 1467 aa29.71■■■□□ 2.35
RWDD3-205ENST00000492639 TDRD9Q8NDG6 1382 aaKnown RBP29.69■■■□□ 2.34
RWDD3-205ENST00000492639 FGD5Q6ZNL6 1462 aa29.61■■■□□ 2.33
RWDD3-205ENST00000492639 CHMP7Q8WUX9 453 aaPredicted RBP29.6■■■□□ 2.33
RWDD3-205ENST00000492639 TRHP20396 242 aaPredicted RBP29.58■■■□□ 2.33
RWDD3-205ENST00000492639 WDR97A6NE52 1622 aa29.56■■■□□ 2.32
RWDD3-205ENST00000492639 SNAPC4Q5SXM2 1469 aa29.56■■■□□ 2.32
RWDD3-205ENST00000492639 ARAP1Q96P48 1450 aa29.54■■■□□ 2.32
RWDD3-205ENST00000492639 CUX1P39880 1505 aa29.52■■■□□ 2.32
RWDD3-205ENST00000492639 GRIN2BQ13224 1484 aa29.49■■■□□ 2.31
RWDD3-205ENST00000492639 MAGI1Q96QZ7 1491 aaPredicted RBP29.48■■■□□ 2.31
RWDD3-205ENST00000492639 SYNJ1O43426 1573 aa29.45■■■□□ 2.31
RWDD3-205ENST00000492639 SUPT5HO00267 1087 aaKnown RBP29.41■■■□□ 2.3
RWDD3-205ENST00000492639 SYNJ2O15056 1496 aa29.39■■■□□ 2.3
RWDD3-205ENST00000492639 CLASP1Q7Z460 1538 aa29.38■■■□□ 2.29
RWDD3-205ENST00000492639 GAPVD1Q14C86 1478 aa29.36■■■□□ 2.29
RWDD3-205ENST00000492639 PBRM1Q86U86 1689 aa29.28■■■□□ 2.28
RWDD3-205ENST00000492639 ABCA10Q8WWZ4 1543 aa29.25■■■□□ 2.27
RWDD3-205ENST00000492639 WRNQ14191 1432 aaPredicted RBP eCLIP29.2■■■□□ 2.26
RWDD3-205ENST00000492639 ABCA5Q8WWZ7 1642 aa29.17■■■□□ 2.26
RWDD3-205ENST00000492639 GRIN2AQ12879 1464 aa29.08■■■□□ 2.25
RWDD3-205ENST00000492639 TOP2BQ02880 1626 aa29.02■■■□□ 2.24
RWDD3-205ENST00000492639 ADAMTS12P58397 1594 aa29■■■□□ 2.23
RWDD3-205ENST00000492639 BIVM-ERCC5R4GMW8 1640 aa28.99■■■□□ 2.23
RWDD3-205ENST00000492639 FHAD1B1AJZ9 1412 aa28.99■■■□□ 2.23
RWDD3-205ENST00000492639 NUP160Q12769 1436 aa28.95■■■□□ 2.23
RWDD3-205ENST00000492639 CEP170Q5SW79 1584 aa28.92■■■□□ 2.22
RWDD3-205ENST00000492639 ERICH3Q5RHP9 1530 aa28.9■■■□□ 2.22
RWDD3-205ENST00000492639 ERCC6L2Q5T890 1561 aa28.89■■■□□ 2.22
RWDD3-205ENST00000492639 AEBP2Q6ZN18 517 aaPredicted RBP28.89■■■□□ 2.22
RWDD3-205ENST00000492639 SHROOM2Q13796 1616 aa28.8■■■□□ 2.2
RWDD3-205ENST00000492639 PRG4Q92954 1404 aaPredicted RBP28.77■■■□□ 2.2
RWDD3-205ENST00000492639 JPH4Q96JJ6 628 aa28.76■■■□□ 2.19
RWDD3-205ENST00000492639 NPM1P06748 294 aaKnown RBP eCLIP28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms