RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 NISCHQ9Y2I1 1504 aa39.05■■■■□ 3.84
PKP4-214ENST00000492496 CCDC180Q9P1Z9 1646 aa34.86■■■■□ 3.17
PKP4-214ENST00000492496 ABCC9O60706 1549 aa34.12■■■■□ 3.05
PKP4-214ENST00000492496 RB1CC1Q8TDY2 1594 aa32.84■■■□□ 2.85
PKP4-214ENST00000492496 NACADO15069 1562 aa32.78■■■□□ 2.84
PKP4-214ENST00000492496 DCAF8L2P0C7V8 631 aa32.58■■■□□ 2.81
PKP4-214ENST00000492496 MYO15BQ96JP2 1530 aa32.56■■■□□ 2.8
PKP4-214ENST00000492496 ZCCHC6Q5VYS8 1495 aaKnown RBP32.5■■■□□ 2.79
PKP4-214ENST00000492496 DCAF1Q9Y4B6 1507 aa32.36■■■□□ 2.77
PKP4-214ENST00000492496 UNC13AQ9UPW8 1703 aa32.14■■■□□ 2.74
PKP4-214ENST00000492496 BICRAQ9NZM4 1560 aa31.84■■■□□ 2.69
PKP4-214ENST00000492496 PABPN1Q86U42 306 aaKnown RBP eCLIP31.82■■■□□ 2.68
PKP4-214ENST00000492496 SCRIBQ14160 1630 aa31.71■■■□□ 2.67
PKP4-214ENST00000492496 SHROOM4Q9ULL8 1493 aa31.54■■■□□ 2.64
PKP4-214ENST00000492496 DNAJC5BQ9UF47 199 aa31.42■■■□□ 2.62
PKP4-214ENST00000492496 EIF4G1Q04637 1599 aaKnown RBP31■■■□□ 2.55
PKP4-214ENST00000492496 CC2D2AQ9P2K1 1620 aa30.91■■■□□ 2.54
PKP4-214ENST00000492496 CECR2Q9BXF3 1484 aa30.7■■■□□ 2.5
PKP4-214ENST00000492496 SMARCA4P51532 1647 aa30.35■■■□□ 2.45
PKP4-214ENST00000492496 BAZ1AQ9NRL2 1556 aaPredicted RBP30.29■■■□□ 2.44
PKP4-214ENST00000492496 NCAPD3P42695 1498 aa30.22■■■□□ 2.43
PKP4-214ENST00000492496 ATAD2BQ9ULI0 1458 aa30.19■■■□□ 2.42
PKP4-214ENST00000492496 SMARCA2P51531 1590 aa30.19■■■□□ 2.42
PKP4-214ENST00000492496 PEG3Q9GZU2 1588 aa30.08■■■□□ 2.41
PKP4-214ENST00000492496 HMGXB3Q12766 1538 aa30.08■■■□□ 2.41
PKP4-214ENST00000492496 MROH2BQ7Z745 1585 aa30.07■■■□□ 2.4
PKP4-214ENST00000492496 BAZ1BQ9UIG0 1483 aaKnown RBP29.93■■■□□ 2.38
PKP4-214ENST00000492496 WIZO95785 1651 aa29.77■■■□□ 2.36
PKP4-214ENST00000492496 RSF1Q96T23 1441 aaPredicted RBP29.67■■■□□ 2.34
PKP4-214ENST00000492496 NESP48681 1621 aa29.49■■■□□ 2.31
PKP4-214ENST00000492496 LAMC3Q9Y6N6 1575 aa29.47■■■□□ 2.31
PKP4-214ENST00000492496 TOP2AP11388 1531 aaKnown RBP29.45■■■□□ 2.3
PKP4-214ENST00000492496 ERCC6Q03468 1493 aa29.44■■■□□ 2.3
PKP4-214ENST00000492496 CADPSQ9ULU8 1353 aa29.3■■■□□ 2.28
PKP4-214ENST00000492496 PDS5BQ9NTI5 1447 aa29.24■■■□□ 2.27
PKP4-214ENST00000492496 CUX2O14529 1486 aa29.23■■■□□ 2.27
PKP4-214ENST00000492496 KIF21AQ7Z4S6 1674 aa29.21■■■□□ 2.27
PKP4-214ENST00000492496 THOC2Q8NI27 1593 aaKnown RBP29.13■■■□□ 2.25
PKP4-214ENST00000492496 CFTRP13569 1480 aa29.12■■■□□ 2.25
PKP4-214ENST00000492496 CCDC88BA6NC98 1476 aa29.07■■■□□ 2.24
PKP4-214ENST00000492496 PRDM2Q13029 1718 aa29■■■□□ 2.23
PKP4-214ENST00000492496 FANCD2Q9BXW9 1451 aa28.97■■■□□ 2.23
PKP4-214ENST00000492496 CEP164Q9UPV0 1460 aa28.97■■■□□ 2.23
PKP4-214ENST00000492496 MRC2Q9UBG0 1479 aa28.95■■■□□ 2.22
PKP4-214ENST00000492496 WDR62O43379 1518 aa28.88■■■□□ 2.21
PKP4-214ENST00000492496 SUPT5HO00267 1087 aaKnown RBP28.74■■■□□ 2.19
PKP4-214ENST00000492496 URB2Q14146 1524 aaKnown RBP28.69■■■□□ 2.18
PKP4-214ENST00000492496 ABCC8Q09428 1581 aa28.54■■■□□ 2.16
PKP4-214ENST00000492496 TOPBP1Q92547 1522 aa28.5■■■□□ 2.15
PKP4-214ENST00000492496 DNMBPQ6XZF7 1577 aa28.48■■■□□ 2.15
PKP4-214ENST00000492496 DNAJC5Q9H3Z4 198 aa28.46■■■□□ 2.15
PKP4-214ENST00000492496 IFT140Q96RY7 1462 aa28.36■■■□□ 2.13
PKP4-214ENST00000492496 POLA1P09884 1462 aaPredicted RBP28.24■■■□□ 2.11
PKP4-214ENST00000492496 CHIC1Q5VXU3 224 aa28.24■■■□□ 2.11
PKP4-214ENST00000492496 CUX1P39880 1505 aa28.23■■■□□ 2.11
PKP4-214ENST00000492496 TARBP1Q13395 1621 aaKnown RBP28.22■■■□□ 2.11
PKP4-214ENST00000492496 AEBP2Q6ZN18 517 aaPredicted RBP28.21■■■□□ 2.11
PKP4-214ENST00000492496 ZNF608Q9ULD9 1512 aaPredicted RBP28.21■■■□□ 2.11
PKP4-214ENST00000492496 FGD5Q6ZNL6 1462 aa28.15■■■□□ 2.1
PKP4-214ENST00000492496 EIF4G3O43432 1585 aaKnown RBP28.14■■■□□ 2.1
PKP4-214ENST00000492496 SOGA1O94964 1423 aa28.12■■■□□ 2.09
PKP4-214ENST00000492496 RAD54L2Q9Y4B4 1467 aa28.09■■■□□ 2.09
PKP4-214ENST00000492496 WDR97A6NE52 1622 aa28.05■■■□□ 2.08
PKP4-214ENST00000492496 AQRO60306 1485 aaKnown RBP eCLIP28.02■■■□□ 2.082e-10■■■□□ 16
PKP4-214ENST00000492496 BIVM-ERCC5R4GMW8 1640 aa28■■■□□ 2.07
PKP4-214ENST00000492496 WRNQ14191 1432 aaPredicted RBP eCLIP27.99■■■□□ 2.07
PKP4-214ENST00000492496 TOP2BQ02880 1626 aa27.98■■■□□ 2.07
PKP4-214ENST00000492496 OSCARQ8IYS5 282 aa27.95■■■□□ 2.06
PKP4-214ENST00000492496 TDRD9Q8NDG6 1382 aaKnown RBP27.95■■■□□ 2.06
PKP4-214ENST00000492496 SYNJ1O43426 1573 aa27.93■■■□□ 2.06
PKP4-214ENST00000492496 ABCA10Q8WWZ4 1543 aa27.89■■■□□ 2.06
PKP4-214ENST00000492496 CHD1O14646 1710 aa27.84■■■□□ 2.05
PKP4-214ENST00000492496 GRIN2BQ13224 1484 aa27.83■■■□□ 2.04
PKP4-214ENST00000492496 ABCA5Q8WWZ7 1642 aa27.81■■■□□ 2.04
PKP4-214ENST00000492496 PBRM1Q86U86 1689 aa27.81■■■□□ 2.04
PKP4-214ENST00000492496 GAPVD1Q14C86 1478 aa27.8■■■□□ 2.04
PKP4-214ENST00000492496 SNAPC4Q5SXM2 1469 aa27.78■■■□□ 2.04
PKP4-214ENST00000492496 MAGI1Q96QZ7 1491 aaPredicted RBP27.78■■■□□ 2.04
PKP4-214ENST00000492496 FBLN2P98095 1184 aa27.69■■■□□ 2.02
PKP4-214ENST00000492496 SYNJ2O15056 1496 aa27.67■■■□□ 2.02
PKP4-214ENST00000492496 CHMP7Q8WUX9 453 aaPredicted RBP27.63■■■□□ 2.01
PKP4-214ENST00000492496 ERICH3Q5RHP9 1530 aa27.57■■■□□ 2
PKP4-214ENST00000492496 RIMBP3CA6NJZ7 1639 aa27.56■■■□□ 2
PKP4-214ENST00000492496 RIMBP3BA6NNM3 1639 aa27.56■■■□□ 2
PKP4-214ENST00000492496 RIMBP3Q9UFD9 1639 aa27.56■■■□□ 2
PKP4-214ENST00000492496 ADAMTS12P58397 1594 aa27.54■■■□□ 2
PKP4-214ENST00000492496 ARHGEF11O15085 1522 aa27.51■■■□□ 2
PKP4-214ENST00000492496 CLASP1Q7Z460 1538 aa27.51■■■□□ 2
PKP4-214ENST00000492496 FHAD1B1AJZ9 1412 aa27.48■■□□□ 1.99
PKP4-214ENST00000492496 GRIN2AQ12879 1464 aa27.46■■□□□ 1.99
PKP4-214ENST00000492496 KIF27Q86VH2 1401 aa27.41■■□□□ 1.98
PKP4-214ENST00000492496 TRIM41Q8WV44 630 aa27.4■■□□□ 1.98
PKP4-214ENST00000492496 NUP160Q12769 1436 aa27.35■■□□□ 1.97
PKP4-214ENST00000492496 CEP170Q5SW79 1584 aa27.34■■□□□ 1.97
PKP4-214ENST00000492496 CUL7Q14999 1698 aa27.32■■□□□ 1.96
PKP4-214ENST00000492496 IGF1RP08069 1367 aa27.31■■□□□ 1.96
PKP4-214ENST00000492496 ARAP1Q96P48 1450 aa27.27■■□□□ 1.96
PKP4-214ENST00000492496 CYB5RLQ6IPT4 315 aa27.22■■□□□ 1.95
PKP4-214ENST00000492496 SHROOM2Q13796 1616 aa27.2■■□□□ 1.95
PKP4-214ENST00000492496 CARMIL1Q5VZK9 1371 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms