RNA–Protein interactions for RNA: ENST00000492121.1

TPM3P9-202, Transcript of tropomyosin 3 pseudogene 9, humanhuman

BASIC

Gene TPM3P9, Length 745 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-202ENST00000492121 NISCHQ9Y2I1 1504 aa24.29■■□□□ 1.48
TPM3P9-202ENST00000492121 AEBP2Q6ZN18 517 aaPredicted RBP23.12■■□□□ 1.29
TPM3P9-202ENST00000492121 CHIC1Q5VXU3 224 aa21.97■■□□□ 1.11
TPM3P9-202ENST00000492121 CCDC180Q9P1Z9 1646 aa21.7■■□□□ 1.06
TPM3P9-202ENST00000492121 ABCC9O60706 1549 aa21.69■■□□□ 1.06
TPM3P9-202ENST00000492121 RB1CC1Q8TDY2 1594 aa20.68■□□□□ 0.9
TPM3P9-202ENST00000492121 NACADO15069 1562 aa20.56■□□□□ 0.88
TPM3P9-202ENST00000492121 DCAF8L2P0C7V8 631 aa20.49■□□□□ 0.87
TPM3P9-202ENST00000492121 MYO15BQ96JP2 1530 aa20.34■□□□□ 0.85
TPM3P9-202ENST00000492121 DNAJC5BQ9UF47 199 aa20.28■□□□□ 0.84
TPM3P9-202ENST00000492121 PABPN1Q86U42 306 aaKnown RBP eCLIP20.22■□□□□ 0.83
TPM3P9-202ENST00000492121 ZCCHC6Q5VYS8 1495 aaKnown RBP20.15■□□□□ 0.82
TPM3P9-202ENST00000492121 DCAF1Q9Y4B6 1507 aa20.09■□□□□ 0.81
TPM3P9-202ENST00000492121 UNC13AQ9UPW8 1703 aa20.03■□□□□ 0.8
TPM3P9-202ENST00000492121 BICRAQ9NZM4 1560 aa20.03■□□□□ 0.8
TPM3P9-202ENST00000492121 SHROOM4Q9ULL8 1493 aa19.86■□□□□ 0.77
TPM3P9-202ENST00000492121 SCRIBQ14160 1630 aa19.78■□□□□ 0.76
TPM3P9-202ENST00000492121 SENP3Q9H4L4 574 aaPredicted RBP19.67■□□□□ 0.74
TPM3P9-202ENST00000492121 CC2D2AQ9P2K1 1620 aa19.56■□□□□ 0.72
TPM3P9-202ENST00000492121 EIF4G1Q04637 1599 aaKnown RBP19.56■□□□□ 0.72
TPM3P9-202ENST00000492121 CECR2Q9BXF3 1484 aa19.55■□□□□ 0.72
TPM3P9-202ENST00000492121 PHF23Q9BUL5 403 aaPredicted RBP19.47■□□□□ 0.71
TPM3P9-202ENST00000492121 NCAPD3P42695 1498 aa19.02■□□□□ 0.63
TPM3P9-202ENST00000492121 ATAD2BQ9ULI0 1458 aa18.95■□□□□ 0.62
TPM3P9-202ENST00000492121 SMARCA4P51532 1647 aa18.89■□□□□ 0.62
TPM3P9-202ENST00000492121 SMARCA2P51531 1590 aa18.89■□□□□ 0.61
TPM3P9-202ENST00000492121 BAZ1AQ9NRL2 1556 aaPredicted RBP18.85■□□□□ 0.61
TPM3P9-202ENST00000492121 HMGXB3Q12766 1538 aa18.84■□□□□ 0.61
TPM3P9-202ENST00000492121 BAZ1BQ9UIG0 1483 aaKnown RBP18.76■□□□□ 0.59
TPM3P9-202ENST00000492121 PEG3Q9GZU2 1588 aa18.74■□□□□ 0.59
TPM3P9-202ENST00000492121 ERCC6Q03468 1493 aa18.74■□□□□ 0.59
TPM3P9-202ENST00000492121 MROH2BQ7Z745 1585 aa18.7■□□□□ 0.58
TPM3P9-202ENST00000492121 CUX2O14529 1486 aa18.69■□□□□ 0.58
TPM3P9-202ENST00000492121 NESP48681 1621 aa18.63■□□□□ 0.57
TPM3P9-202ENST00000492121 DNAJC5Q9H3Z4 198 aa18.61■□□□□ 0.57
TPM3P9-202ENST00000492121 LAMC3Q9Y6N6 1575 aa18.52■□□□□ 0.56
TPM3P9-202ENST00000492121 PDS5BQ9NTI5 1447 aa18.47■□□□□ 0.55
TPM3P9-202ENST00000492121 CADPSQ9ULU8 1353 aa18.44■□□□□ 0.54
TPM3P9-202ENST00000492121 WIZO95785 1651 aa18.42■□□□□ 0.54
TPM3P9-202ENST00000492121 THOC2Q8NI27 1593 aaKnown RBP18.41■□□□□ 0.54
TPM3P9-202ENST00000492121 FOXD1Q16676 465 aa18.38■□□□□ 0.53
TPM3P9-202ENST00000492121 RSF1Q96T23 1441 aaPredicted RBP18.37■□□□□ 0.53
TPM3P9-202ENST00000492121 KIF21AQ7Z4S6 1674 aa18.31■□□□□ 0.52
TPM3P9-202ENST00000492121 MRC2Q9UBG0 1479 aa18.28■□□□□ 0.52
TPM3P9-202ENST00000492121 TOP2AP11388 1531 aaKnown RBP18.26■□□□□ 0.51
TPM3P9-202ENST00000492121 CFTRP13569 1480 aa18.24■□□□□ 0.51
TPM3P9-202ENST00000492121 CEP164Q9UPV0 1460 aa18.22■□□□□ 0.51
TPM3P9-202ENST00000492121 WDR62O43379 1518 aa18.22■□□□□ 0.51
TPM3P9-202ENST00000492121 FANCD2Q9BXW9 1451 aa18.2■□□□□ 0.5
TPM3P9-202ENST00000492121 CCDC88BA6NC98 1476 aa18.06■□□□□ 0.48
TPM3P9-202ENST00000492121 URB2Q14146 1524 aaKnown RBP18.03■□□□□ 0.48
TPM3P9-202ENST00000492121 PRDM2Q13029 1718 aa17.89■□□□□ 0.45
TPM3P9-202ENST00000492121 OSCARQ8IYS5 282 aa17.88■□□□□ 0.45
TPM3P9-202ENST00000492121 IFT140Q96RY7 1462 aa17.87■□□□□ 0.45
TPM3P9-202ENST00000492121 TOPBP1Q92547 1522 aa17.86■□□□□ 0.45
TPM3P9-202ENST00000492121 ABCC8Q09428 1581 aa17.86■□□□□ 0.45
TPM3P9-202ENST00000492121 TRIM41Q8WV44 630 aa17.8■□□□□ 0.44
TPM3P9-202ENST00000492121 ZNF608Q9ULD9 1512 aaPredicted RBP17.8■□□□□ 0.44
TPM3P9-202ENST00000492121 DNMBPQ6XZF7 1577 aa17.79■□□□□ 0.44
TPM3P9-202ENST00000492121 POLA1P09884 1462 aaPredicted RBP17.69■□□□□ 0.42
TPM3P9-202ENST00000492121 EIF4G3O43432 1585 aaKnown RBP17.67■□□□□ 0.42
TPM3P9-202ENST00000492121 AQRO60306 1485 aaKnown RBP eCLIP17.66■□□□□ 0.42
TPM3P9-202ENST00000492121 TARBP1Q13395 1621 aaKnown RBP17.65■□□□□ 0.42
TPM3P9-202ENST00000492121 SOGA1O94964 1423 aa17.63■□□□□ 0.41
TPM3P9-202ENST00000492121 RAD54L2Q9Y4B4 1467 aa17.61■□□□□ 0.41
TPM3P9-202ENST00000492121 SUPT5HO00267 1087 aaKnown RBP17.6■□□□□ 0.41
TPM3P9-202ENST00000492121 FGD5Q6ZNL6 1462 aa17.58■□□□□ 0.41
TPM3P9-202ENST00000492121 TDRD9Q8NDG6 1382 aaKnown RBP17.58■□□□□ 0.4
TPM3P9-202ENST00000492121 PLPPR3Q6T4P5 718 aa17.58■□□□□ 0.4
TPM3P9-202ENST00000492121 CUX1P39880 1505 aa17.57■□□□□ 0.4
TPM3P9-202ENST00000492121 FBLN2P98095 1184 aa17.55■□□□□ 0.4
TPM3P9-202ENST00000492121 ARHGEF11O15085 1522 aa17.54■□□□□ 0.4
TPM3P9-202ENST00000492121 RIMBP3CA6NJZ7 1639 aa17.54■□□□□ 0.4
TPM3P9-202ENST00000492121 RIMBP3BA6NNM3 1639 aa17.54■□□□□ 0.4
TPM3P9-202ENST00000492121 RIMBP3Q9UFD9 1639 aa17.54■□□□□ 0.4
TPM3P9-202ENST00000492121 WDR97A6NE52 1622 aa17.52■□□□□ 0.4
TPM3P9-202ENST00000492121 SNAPC4Q5SXM2 1469 aa17.49■□□□□ 0.39
TPM3P9-202ENST00000492121 GRIN2BQ13224 1484 aa17.47■□□□□ 0.39
TPM3P9-202ENST00000492121 MAGI1Q96QZ7 1491 aaPredicted RBP17.46■□□□□ 0.39
TPM3P9-202ENST00000492121 CHD1O14646 1710 aa17.46■□□□□ 0.39
TPM3P9-202ENST00000492121 CHMP7Q8WUX9 453 aaPredicted RBP17.45■□□□□ 0.38
TPM3P9-202ENST00000492121 CYB5RLQ6IPT4 315 aa17.43■□□□□ 0.38
TPM3P9-202ENST00000492121 GAPVD1Q14C86 1478 aa17.4■□□□□ 0.38
TPM3P9-202ENST00000492121 ABCA10Q8WWZ4 1543 aa17.4■□□□□ 0.38
TPM3P9-202ENST00000492121 SYNJ2O15056 1496 aa17.39■□□□□ 0.37
TPM3P9-202ENST00000492121 WRNQ14191 1432 aaPredicted RBP eCLIP17.37■□□□□ 0.37
TPM3P9-202ENST00000492121 ARAP1Q96P48 1450 aa17.37■□□□□ 0.37
TPM3P9-202ENST00000492121 SYNJ1O43426 1573 aa17.36■□□□□ 0.37
TPM3P9-202ENST00000492121 CLASP1Q7Z460 1538 aa17.35■□□□□ 0.37
TPM3P9-202ENST00000492121 ABCA5Q8WWZ7 1642 aa17.32■□□□□ 0.36
TPM3P9-202ENST00000492121 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
TPM3P9-202ENST00000492121 PBRM1Q86U86 1689 aa17.28■□□□□ 0.36
TPM3P9-202ENST00000492121 BIVM-ERCC5R4GMW8 1640 aa17.26■□□□□ 0.35
TPM3P9-202ENST00000492121 ADRA2BP18089 450 aa17.24■□□□□ 0.35
TPM3P9-202ENST00000492121 PIAS4Q8N2W9 510 aaPredicted RBP17.24■□□□□ 0.35
TPM3P9-202ENST00000492121 PPP6R1Q9UPN7 881 aa17.24■□□□□ 0.35
TPM3P9-202ENST00000492121 GRIN2AQ12879 1464 aa17.23■□□□□ 0.35
TPM3P9-202ENST00000492121 TRHP20396 242 aaPredicted RBP17.21■□□□□ 0.35
TPM3P9-202ENST00000492121 FHAD1B1AJZ9 1412 aa17.21■□□□□ 0.34
TPM3P9-202ENST00000492121 ADAMTS12P58397 1594 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms