RNA–Protein interactions for RNA: ENST00000492072.5

CPA4-209, Transcript of carboxypeptidase A4, humanhuman

TSL 4

Gene CPA4, Length 535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-209ENST00000492072 AEBP2Q6ZN18 517 aaPredicted RBP17.88■□□□□ 0.45
CPA4-209ENST00000492072 CHIC1Q5VXU3 224 aa16.47■□□□□ 0.23
CPA4-209ENST00000492072 NISCHQ9Y2I1 1504 aa16.04■□□□□ 0.16
CPA4-209ENST00000492072 SENP3Q9H4L4 574 aaPredicted RBP15.13■□□□□ 0.01
CPA4-209ENST00000492072 PHF23Q9BUL5 403 aaPredicted RBP14.95□□□□□ -0.02
CPA4-209ENST00000492072 ABCC9O60706 1549 aa14.43□□□□□ -0.1
CPA4-209ENST00000492072 CCDC180Q9P1Z9 1646 aa14.31□□□□□ -0.12
CPA4-209ENST00000492072 FOXD1Q16676 465 aa14.28□□□□□ -0.12
CPA4-209ENST00000492072 POTEDQ86YR6 584 aa14.02□□□□□ -0.17
CPA4-209ENST00000492072 DCAF8L2P0C7V8 631 aa13.67□□□□□ -0.22
CPA4-209ENST00000492072 RB1CC1Q8TDY2 1594 aa13.62□□□□□ -0.23
CPA4-209ENST00000492072 DNAJC5BQ9UF47 199 aa13.54□□□□□ -0.24
CPA4-209ENST00000492072 NACADO15069 1562 aa13.53□□□□□ -0.24
CPA4-209ENST00000492072 PABPN1Q86U42 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
CPA4-209ENST00000492072 UNC13AQ9UPW8 1703 aa13.42□□□□□ -0.26
CPA4-209ENST00000492072 MSH5O43196 834 aa13.4□□□□□ -0.26
CPA4-209ENST00000492072 ZCCHC6Q5VYS8 1495 aaKnown RBP13.3□□□□□ -0.28
CPA4-209ENST00000492072 BICRAQ9NZM4 1560 aa13.3□□□□□ -0.28
CPA4-209ENST00000492072 MYO15BQ96JP2 1530 aa13.28□□□□□ -0.28
CPA4-209ENST00000492072 SCRIBQ14160 1630 aa13.19□□□□□ -0.3
CPA4-209ENST00000492072 DCAF1Q9Y4B6 1507 aa13.16□□□□□ -0.3
CPA4-209ENST00000492072 PIAS4Q8N2W9 510 aaPredicted RBP13.14□□□□□ -0.31
CPA4-209ENST00000492072 PPP6R1Q9UPN7 881 aa13.06□□□□□ -0.32
CPA4-209ENST00000492072 CC2D2AQ9P2K1 1620 aa12.99□□□□□ -0.33
CPA4-209ENST00000492072 EIF4G1Q04637 1599 aaKnown RBP12.94□□□□□ -0.34
CPA4-209ENST00000492072 CECR2Q9BXF3 1484 aa12.94□□□□□ -0.34
CPA4-209ENST00000492072 SHROOM4Q9ULL8 1493 aa12.94□□□□□ -0.34
CPA4-209ENST00000492072 ADRA2BP18089 450 aa12.94□□□□□ -0.34
CPA4-209ENST00000492072 PLPPR3Q6T4P5 718 aa12.81□□□□□ -0.36
CPA4-209ENST00000492072 ATAD2BQ9ULI0 1458 aa12.53□□□□□ -0.4
CPA4-209ENST00000492072 SMARCA4P51532 1647 aa12.51□□□□□ -0.41
CPA4-209ENST00000492072 NCAPD3P42695 1498 aa12.5□□□□□ -0.41
CPA4-209ENST00000492072 SMARCA2P51531 1590 aa12.43□□□□□ -0.42
CPA4-209ENST00000492072 MROH2BQ7Z745 1585 aa12.43□□□□□ -0.42
CPA4-209ENST00000492072 NESP48681 1621 aa12.42□□□□□ -0.42
CPA4-209ENST00000492072 BAZ1AQ9NRL2 1556 aaPredicted RBP12.42□□□□□ -0.42
CPA4-209ENST00000492072 ERCC6Q03468 1493 aa12.4□□□□□ -0.42
CPA4-209ENST00000492072 HMGXB3Q12766 1538 aa12.4□□□□□ -0.42
CPA4-209ENST00000492072 BAZ1BQ9UIG0 1483 aaKnown RBP12.4□□□□□ -0.43
CPA4-209ENST00000492072 PEG3Q9GZU2 1588 aa12.32□□□□□ -0.44
CPA4-209ENST00000492072 WIZO95785 1651 aa12.29□□□□□ -0.44
CPA4-209ENST00000492072 DNAJC5Q9H3Z4 198 aa12.29□□□□□ -0.44
CPA4-209ENST00000492072 CUX2O14529 1486 aa12.28□□□□□ -0.44
CPA4-209ENST00000492072 KIF21AQ7Z4S6 1674 aa12.22□□□□□ -0.45
CPA4-209ENST00000492072 THOC2Q8NI27 1593 aaKnown RBP12.21□□□□□ -0.46
CPA4-209ENST00000492072 LAMC3Q9Y6N6 1575 aa12.21□□□□□ -0.46
CPA4-209ENST00000492072 RSF1Q96T23 1441 aaPredicted RBP12.16□□□□□ -0.46
CPA4-209ENST00000492072 CADPSQ9ULU8 1353 aa12.15□□□□□ -0.46
CPA4-209ENST00000492072 PDS5BQ9NTI5 1447 aa12.14□□□□□ -0.47
CPA4-209ENST00000492072 MRC2Q9UBG0 1479 aa12.07□□□□□ -0.48
CPA4-209ENST00000492072 TOP2AP11388 1531 aaKnown RBP12.06□□□□□ -0.48
CPA4-209ENST00000492072 MAPK8IP2Q13387 824 aaPredicted RBP12.06□□□□□ -0.48
CPA4-209ENST00000492072 FANCD2Q9BXW9 1451 aa12.04□□□□□ -0.48
CPA4-209ENST00000492072 CEP164Q9UPV0 1460 aa12.03□□□□□ -0.48
CPA4-209ENST00000492072 WDR62O43379 1518 aa12.02□□□□□ -0.48
CPA4-209ENST00000492072 CFTRP13569 1480 aa12.02□□□□□ -0.49
CPA4-209ENST00000492072 DMRT2Q9Y5R5 561 aa11.98□□□□□ -0.49
CPA4-209ENST00000492072 CCDC88BA6NC98 1476 aa11.97□□□□□ -0.49
CPA4-209ENST00000492072 URB2Q14146 1524 aaKnown RBP11.96□□□□□ -0.49
CPA4-209ENST00000492072 PRDM2Q13029 1718 aa11.89□□□□□ -0.51
CPA4-209ENST00000492072 TRIM41Q8WV44 630 aa11.89□□□□□ -0.51
CPA4-209ENST00000492072 ZNF608Q9ULD9 1512 aaPredicted RBP11.84□□□□□ -0.51
CPA4-209ENST00000492072 TOPBP1Q92547 1522 aa11.82□□□□□ -0.52
CPA4-209ENST00000492072 CACNB1Q02641 598 aaPredicted RBP11.81□□□□□ -0.52
CPA4-209ENST00000492072 OSCARQ8IYS5 282 aa11.78□□□□□ -0.52
CPA4-209ENST00000492072 SUPT5HO00267 1087 aaKnown RBP11.77□□□□□ -0.53
CPA4-209ENST00000492072 IFT140Q96RY7 1462 aa11.76□□□□□ -0.53
CPA4-209ENST00000492072 DNMBPQ6XZF7 1577 aa11.75□□□□□ -0.53
CPA4-209ENST00000492072 EIF4G3O43432 1585 aaKnown RBP11.73□□□□□ -0.53
CPA4-209ENST00000492072 AQRO60306 1485 aaKnown RBP eCLIP11.73□□□□□ -0.53
CPA4-209ENST00000492072 RAD54L2Q9Y4B4 1467 aa11.72□□□□□ -0.53
CPA4-209ENST00000492072 TARBP1Q13395 1621 aaKnown RBP11.71□□□□□ -0.54
CPA4-209ENST00000492072 POLA1P09884 1462 aaPredicted RBP11.7□□□□□ -0.54
CPA4-209ENST00000492072 ABCC8Q09428 1581 aa11.7□□□□□ -0.54
CPA4-209ENST00000492072 FBLN2P98095 1184 aa11.68□□□□□ -0.54
CPA4-209ENST00000492072 TDRD9Q8NDG6 1382 aaKnown RBP11.67□□□□□ -0.54
CPA4-209ENST00000492072 CHD1O14646 1710 aa11.66□□□□□ -0.54
CPA4-209ENST00000492072 CUX1P39880 1505 aa11.66□□□□□ -0.54
CPA4-209ENST00000492072 RIMBP3CA6NJZ7 1639 aa11.66□□□□□ -0.54
CPA4-209ENST00000492072 RIMBP3BA6NNM3 1639 aa11.66□□□□□ -0.54
CPA4-209ENST00000492072 RIMBP3Q9UFD9 1639 aa11.66□□□□□ -0.54
CPA4-209ENST00000492072 SOGA1O94964 1423 aa11.66□□□□□ -0.54
CPA4-209ENST00000492072 FGD5Q6ZNL6 1462 aa11.65□□□□□ -0.54
CPA4-209ENST00000492072 SCAF1Q9H7N4 1312 aaKnown RBP11.61□□□□□ -0.55
CPA4-209ENST00000492072 ARHGEF11O15085 1522 aa11.61□□□□□ -0.55
CPA4-209ENST00000492072 SNAPC4Q5SXM2 1469 aa11.59□□□□□ -0.55
CPA4-209ENST00000492072 CYB5RLQ6IPT4 315 aa11.59□□□□□ -0.55
CPA4-209ENST00000492072 WDR97A6NE52 1622 aa11.53□□□□□ -0.56
CPA4-209ENST00000492072 ARAP1Q96P48 1450 aa11.53□□□□□ -0.56
CPA4-209ENST00000492072 CHMP7Q8WUX9 453 aaPredicted RBP11.53□□□□□ -0.56
CPA4-209ENST00000492072 GRIN2BQ13224 1484 aa11.51□□□□□ -0.57
CPA4-209ENST00000492072 PBRM1Q86U86 1689 aa11.51□□□□□ -0.57
CPA4-209ENST00000492072 GAPVD1Q14C86 1478 aa11.51□□□□□ -0.57
CPA4-209ENST00000492072 RNF39Q9H2S5 420 aa11.49□□□□□ -0.57
CPA4-209ENST00000492072 MAGI1Q96QZ7 1491 aaPredicted RBP11.49□□□□□ -0.57
CPA4-209ENST00000492072 CLASP1Q7Z460 1538 aa11.48□□□□□ -0.57
CPA4-209ENST00000492072 SYNJ1O43426 1573 aa11.48□□□□□ -0.57
CPA4-209ENST00000492072 ABCA5Q8WWZ7 1642 aa11.47□□□□□ -0.57
CPA4-209ENST00000492072 ABCA10Q8WWZ4 1543 aa11.47□□□□□ -0.57
CPA4-209ENST00000492072 SYNJ2O15056 1496 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms