RNA–Protein interactions for RNA: ENST00000491551.3

RN7SL597P-201, Transcript of RNA, 7SL, cytoplasmic 597, pseudogene, humanhuman

BASIC

Gene RN7SL597P, Length 296 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL597P-201ENST00000491551 NISCHQ9Y2I1 1504 aa26.1■■□□□ 1.77
RN7SL597P-201ENST00000491551 CCDC180Q9P1Z9 1646 aa23.3■■□□□ 1.32
RN7SL597P-201ENST00000491551 ABCC9O60706 1549 aa22.62■■□□□ 1.21
RN7SL597P-201ENST00000491551 RB1CC1Q8TDY2 1594 aa21.86■■□□□ 1.09
RN7SL597P-201ENST00000491551 NACADO15069 1562 aa21.82■■□□□ 1.08
RN7SL597P-201ENST00000491551 ZCCHC6Q5VYS8 1495 aaKnown RBP21.77■■□□□ 1.08
RN7SL597P-201ENST00000491551 MYO15BQ96JP2 1530 aa21.7■■□□□ 1.07
RN7SL597P-201ENST00000491551 DCAF8L2P0C7V8 631 aa21.68■■□□□ 1.06
RN7SL597P-201ENST00000491551 DCAF1Q9Y4B6 1507 aa21.63■■□□□ 1.05
RN7SL597P-201ENST00000491551 UNC13AQ9UPW8 1703 aa21.45■■□□□ 1.02
RN7SL597P-201ENST00000491551 SCRIBQ14160 1630 aa21.2■□□□□ 0.98
RN7SL597P-201ENST00000491551 BICRAQ9NZM4 1560 aa21.17■□□□□ 0.98
RN7SL597P-201ENST00000491551 PABPN1Q86U42 306 aaKnown RBP eCLIP21.08■□□□□ 0.97
RN7SL597P-201ENST00000491551 SHROOM4Q9ULL8 1493 aa20.99■□□□□ 0.95
RN7SL597P-201ENST00000491551 DNAJC5BQ9UF47 199 aa20.63■□□□□ 0.89
RN7SL597P-201ENST00000491551 EIF4G1Q04637 1599 aaKnown RBP20.61■□□□□ 0.89
RN7SL597P-201ENST00000491551 CC2D2AQ9P2K1 1620 aa20.53■□□□□ 0.88
RN7SL597P-201ENST00000491551 CECR2Q9BXF3 1484 aa20.33■□□□□ 0.85
RN7SL597P-201ENST00000491551 SMARCA4P51532 1647 aa20.29■□□□□ 0.84
RN7SL597P-201ENST00000491551 BAZ1AQ9NRL2 1556 aaPredicted RBP20.26■□□□□ 0.83
RN7SL597P-201ENST00000491551 SMARCA2P51531 1590 aa20.14■□□□□ 0.81
RN7SL597P-201ENST00000491551 MROH2BQ7Z745 1585 aa20.11■□□□□ 0.81
RN7SL597P-201ENST00000491551 ATAD2BQ9ULI0 1458 aa20.11■□□□□ 0.81
RN7SL597P-201ENST00000491551 PEG3Q9GZU2 1588 aa20.09■□□□□ 0.81
RN7SL597P-201ENST00000491551 NCAPD3P42695 1498 aa20.08■□□□□ 0.81
RN7SL597P-201ENST00000491551 HMGXB3Q12766 1538 aa20.06■□□□□ 0.8
RN7SL597P-201ENST00000491551 BAZ1BQ9UIG0 1483 aaKnown RBP19.97■□□□□ 0.79
RN7SL597P-201ENST00000491551 WIZO95785 1651 aa19.94■□□□□ 0.78
RN7SL597P-201ENST00000491551 RSF1Q96T23 1441 aaPredicted RBP19.86■□□□□ 0.77
RN7SL597P-201ENST00000491551 TOP2AP11388 1531 aaKnown RBP19.73■□□□□ 0.75
RN7SL597P-201ENST00000491551 LAMC3Q9Y6N6 1575 aa19.62■□□□□ 0.73
RN7SL597P-201ENST00000491551 NESP48681 1621 aa19.59■□□□□ 0.73
RN7SL597P-201ENST00000491551 ERCC6Q03468 1493 aa19.52■□□□□ 0.72
RN7SL597P-201ENST00000491551 CADPSQ9ULU8 1353 aa19.49■□□□□ 0.71
RN7SL597P-201ENST00000491551 KIF21AQ7Z4S6 1674 aa19.47■□□□□ 0.71
RN7SL597P-201ENST00000491551 PRDM2Q13029 1718 aa19.45■□□□□ 0.7
RN7SL597P-201ENST00000491551 CCDC88BA6NC98 1476 aa19.43■□□□□ 0.7
RN7SL597P-201ENST00000491551 PDS5BQ9NTI5 1447 aa19.42■□□□□ 0.7
RN7SL597P-201ENST00000491551 CFTRP13569 1480 aa19.41■□□□□ 0.7
RN7SL597P-201ENST00000491551 THOC2Q8NI27 1593 aaKnown RBP19.36■□□□□ 0.69
RN7SL597P-201ENST00000491551 SUPT5HO00267 1087 aaKnown RBP19.34■□□□□ 0.69
RN7SL597P-201ENST00000491551 CUX2O14529 1486 aa19.32■□□□□ 0.68
RN7SL597P-201ENST00000491551 FANCD2Q9BXW9 1451 aa19.29■□□□□ 0.68
RN7SL597P-201ENST00000491551 CEP164Q9UPV0 1460 aa19.29■□□□□ 0.68
RN7SL597P-201ENST00000491551 MRC2Q9UBG0 1479 aa19.25■□□□□ 0.67
RN7SL597P-201ENST00000491551 WDR62O43379 1518 aa19.2■□□□□ 0.66
RN7SL597P-201ENST00000491551 URB2Q14146 1524 aaKnown RBP19.1■□□□□ 0.65
RN7SL597P-201ENST00000491551 DNMBPQ6XZF7 1577 aa19.02■□□□□ 0.64
RN7SL597P-201ENST00000491551 ABCC8Q09428 1581 aa19.02■□□□□ 0.63
RN7SL597P-201ENST00000491551 TOPBP1Q92547 1522 aa19■□□□□ 0.63
RN7SL597P-201ENST00000491551 IFT140Q96RY7 1462 aa18.88■□□□□ 0.61
RN7SL597P-201ENST00000491551 CUX1P39880 1505 aa18.87■□□□□ 0.61
RN7SL597P-201ENST00000491551 POLA1P09884 1462 aaPredicted RBP18.84■□□□□ 0.61
RN7SL597P-201ENST00000491551 TARBP1Q13395 1621 aaKnown RBP18.82■□□□□ 0.6
RN7SL597P-201ENST00000491551 FGD5Q6ZNL6 1462 aa18.8■□□□□ 0.6
RN7SL597P-201ENST00000491551 BIVM-ERCC5R4GMW8 1640 aa18.79■□□□□ 0.6
RN7SL597P-201ENST00000491551 EIF4G3O43432 1585 aaKnown RBP18.76■□□□□ 0.59
RN7SL597P-201ENST00000491551 TOP2BQ02880 1626 aa18.76■□□□□ 0.59
RN7SL597P-201ENST00000491551 WRNQ14191 1432 aaPredicted RBP eCLIP18.75■□□□□ 0.59
RN7SL597P-201ENST00000491551 ZNF608Q9ULD9 1512 aaPredicted RBP18.75■□□□□ 0.59
RN7SL597P-201ENST00000491551 SYNJ1O43426 1573 aa18.74■□□□□ 0.59
RN7SL597P-201ENST00000491551 WDR97A6NE52 1622 aa18.74■□□□□ 0.59
RN7SL597P-201ENST00000491551 SOGA1O94964 1423 aa18.73■□□□□ 0.59
RN7SL597P-201ENST00000491551 RAD54L2Q9Y4B4 1467 aa18.72■□□□□ 0.59
RN7SL597P-201ENST00000491551 AQRO60306 1485 aaKnown RBP eCLIP18.64■□□□□ 0.57
RN7SL597P-201ENST00000491551 ABCA10Q8WWZ4 1543 aa18.63■□□□□ 0.57
RN7SL597P-201ENST00000491551 PBRM1Q86U86 1689 aa18.61■□□□□ 0.57
RN7SL597P-201ENST00000491551 ABCA5Q8WWZ7 1642 aa18.6■□□□□ 0.57
RN7SL597P-201ENST00000491551 TDRD9Q8NDG6 1382 aaKnown RBP18.59■□□□□ 0.57
RN7SL597P-201ENST00000491551 DNAJC5Q9H3Z4 198 aa18.58■□□□□ 0.56
RN7SL597P-201ENST00000491551 CHD1O14646 1710 aa18.56■□□□□ 0.56
RN7SL597P-201ENST00000491551 GRIN2BQ13224 1484 aa18.54■□□□□ 0.56
RN7SL597P-201ENST00000491551 GAPVD1Q14C86 1478 aa18.54■□□□□ 0.56
RN7SL597P-201ENST00000491551 SNAPC4Q5SXM2 1469 aa18.52■□□□□ 0.55
RN7SL597P-201ENST00000491551 MAGI1Q96QZ7 1491 aaPredicted RBP18.51■□□□□ 0.55
RN7SL597P-201ENST00000491551 OSCARQ8IYS5 282 aa18.44■□□□□ 0.54
RN7SL597P-201ENST00000491551 ERICH3Q5RHP9 1530 aa18.43■□□□□ 0.54
RN7SL597P-201ENST00000491551 SYNJ2O15056 1496 aa18.42■□□□□ 0.54
RN7SL597P-201ENST00000491551 ADAMTS12P58397 1594 aa18.42■□□□□ 0.54
RN7SL597P-201ENST00000491551 FBLN2P98095 1184 aa18.38■□□□□ 0.53
RN7SL597P-201ENST00000491551 KIF27Q86VH2 1401 aa18.36■□□□□ 0.53
RN7SL597P-201ENST00000491551 CHMP7Q8WUX9 453 aaPredicted RBP18.35■□□□□ 0.53
RN7SL597P-201ENST00000491551 FHAD1B1AJZ9 1412 aa18.32■□□□□ 0.52
RN7SL597P-201ENST00000491551 CUL7Q14999 1698 aa18.32■□□□□ 0.52
RN7SL597P-201ENST00000491551 GRIN2AQ12879 1464 aa18.31■□□□□ 0.52
RN7SL597P-201ENST00000491551 CLASP1Q7Z460 1538 aa18.29■□□□□ 0.52
RN7SL597P-201ENST00000491551 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
RN7SL597P-201ENST00000491551 RIMBP3CA6NJZ7 1639 aa18.25■□□□□ 0.51
RN7SL597P-201ENST00000491551 RIMBP3BA6NNM3 1639 aa18.25■□□□□ 0.51
RN7SL597P-201ENST00000491551 RIMBP3Q9UFD9 1639 aa18.25■□□□□ 0.51
RN7SL597P-201ENST00000491551 CEP170Q5SW79 1584 aa18.23■□□□□ 0.51
RN7SL597P-201ENST00000491551 IGF1RP08069 1367 aa18.22■□□□□ 0.51
RN7SL597P-201ENST00000491551 ARHGEF11O15085 1522 aa18.22■□□□□ 0.51
RN7SL597P-201ENST00000491551 NUP160Q12769 1436 aa18.21■□□□□ 0.51
RN7SL597P-201ENST00000491551 RUSC2Q8N2Y8 1516 aa18.17■□□□□ 0.5
RN7SL597P-201ENST00000491551 CARMIL1Q5VZK9 1371 aa18.14■□□□□ 0.49
RN7SL597P-201ENST00000491551 SHROOM2Q13796 1616 aa18.13■□□□□ 0.49
RN7SL597P-201ENST00000491551 RAPGEF2Q9Y4G8 1499 aa18.07■□□□□ 0.48
RN7SL597P-201ENST00000491551 CHIC1Q5VXU3 224 aa18.07■□□□□ 0.48
RN7SL597P-201ENST00000491551 ARAP1Q96P48 1450 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms