RNA–Protein interactions for RNA: ENST00000491427.5

STX1A-210, Transcript of syntaxin 1A, humanhuman

TSL 2

Gene STX1A, Length 710 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-210ENST00000491427 NISCHQ9Y2I1 1504 aa38.76■■■■□ 3.8
STX1A-210ENST00000491427 ABCC9O60706 1549 aa35.02■■■■□ 3.2
STX1A-210ENST00000491427 CCDC180Q9P1Z9 1646 aa34.73■■■■□ 3.15
STX1A-210ENST00000491427 RB1CC1Q8TDY2 1594 aa33.23■■■□□ 2.91
STX1A-210ENST00000491427 DNAJC5BQ9UF47 199 aa33.03■■■□□ 2.88
STX1A-210ENST00000491427 DCAF8L2P0C7V8 631 aa33.01■■■□□ 2.87
STX1A-210ENST00000491427 NACADO15069 1562 aa32.97■■■□□ 2.87
STX1A-210ENST00000491427 PABPN1Q86U42 306 aaKnown RBP eCLIP32.67■■■□□ 2.82
STX1A-210ENST00000491427 MYO15BQ96JP2 1530 aa32.46■■■□□ 2.79
STX1A-210ENST00000491427 UNC13AQ9UPW8 1703 aa32.29■■■□□ 2.76
STX1A-210ENST00000491427 BICRAQ9NZM4 1560 aa32.2■■■□□ 2.75
STX1A-210ENST00000491427 ZCCHC6Q5VYS8 1495 aaKnown RBP32.04■■■□□ 2.72
STX1A-210ENST00000491427 DCAF1Q9Y4B6 1507 aa31.99■■■□□ 2.71
STX1A-210ENST00000491427 SHROOM4Q9ULL8 1493 aa31.8■■■□□ 2.68
STX1A-210ENST00000491427 SCRIBQ14160 1630 aa31.7■■■□□ 2.66
STX1A-210ENST00000491427 CECR2Q9BXF3 1484 aa31.57■■■□□ 2.64
STX1A-210ENST00000491427 CC2D2AQ9P2K1 1620 aa31.55■■■□□ 2.64
STX1A-210ENST00000491427 EIF4G1Q04637 1599 aaKnown RBP31.46■■■□□ 2.63
STX1A-210ENST00000491427 DNAJC5Q9H3Z4 198 aa30.49■■■□□ 2.47
STX1A-210ENST00000491427 NCAPD3P42695 1498 aa30.49■■■□□ 2.47
STX1A-210ENST00000491427 ATAD2BQ9ULI0 1458 aa30.35■■■□□ 2.45
STX1A-210ENST00000491427 ERCC6Q03468 1493 aa30.28■■■□□ 2.44
STX1A-210ENST00000491427 SMARCA2P51531 1590 aa30.24■■■□□ 2.43
STX1A-210ENST00000491427 CUX2O14529 1486 aa30.23■■■□□ 2.43
STX1A-210ENST00000491427 SMARCA4P51532 1647 aa30.21■■■□□ 2.43
STX1A-210ENST00000491427 HMGXB3Q12766 1538 aa30.17■■■□□ 2.42
STX1A-210ENST00000491427 BAZ1AQ9NRL2 1556 aaPredicted RBP30.1■■■□□ 2.41
STX1A-210ENST00000491427 BAZ1BQ9UIG0 1483 aaKnown RBP30.06■■■□□ 2.4
STX1A-210ENST00000491427 NESP48681 1621 aa30.01■■■□□ 2.39
STX1A-210ENST00000491427 PEG3Q9GZU2 1588 aa29.91■■■□□ 2.38
STX1A-210ENST00000491427 MROH2BQ7Z745 1585 aa29.86■■■□□ 2.37
STX1A-210ENST00000491427 LAMC3Q9Y6N6 1575 aa29.76■■■□□ 2.35
STX1A-210ENST00000491427 PDS5BQ9NTI5 1447 aa29.71■■■□□ 2.35
STX1A-210ENST00000491427 THOC2Q8NI27 1593 aaKnown RBP29.64■■■□□ 2.33
STX1A-210ENST00000491427 CADPSQ9ULU8 1353 aa29.59■■■□□ 2.33
STX1A-210ENST00000491427 KIF21AQ7Z4S6 1674 aa29.5■■■□□ 2.31
STX1A-210ENST00000491427 WIZO95785 1651 aa29.44■■■□□ 2.3
STX1A-210ENST00000491427 MRC2Q9UBG0 1479 aa29.39■■■□□ 2.3
STX1A-210ENST00000491427 WDR62O43379 1518 aa29.25■■■□□ 2.27
STX1A-210ENST00000491427 CEP164Q9UPV0 1460 aa29.24■■■□□ 2.27
STX1A-210ENST00000491427 RSF1Q96T23 1441 aaPredicted RBP29.23■■■□□ 2.27
STX1A-210ENST00000491427 FANCD2Q9BXW9 1451 aa29.21■■■□□ 2.27
STX1A-210ENST00000491427 CFTRP13569 1480 aa29.17■■■□□ 2.26
STX1A-210ENST00000491427 TRIM41Q8WV44 630 aa29.11■■■□□ 2.25
STX1A-210ENST00000491427 TOP2AP11388 1531 aaKnown RBP29.09■■■□□ 2.25
STX1A-210ENST00000491427 OSCARQ8IYS5 282 aa28.97■■■□□ 2.23
STX1A-210ENST00000491427 URB2Q14146 1524 aaKnown RBP28.94■■■□□ 2.22
STX1A-210ENST00000491427 CCDC88BA6NC98 1476 aa28.83■■■□□ 2.21
STX1A-210ENST00000491427 IFT140Q96RY7 1462 aa28.69■■■□□ 2.18
STX1A-210ENST00000491427 PRDM2Q13029 1718 aa28.66■■■□□ 2.18
STX1A-210ENST00000491427 TOPBP1Q92547 1522 aa28.62■■■□□ 2.17
STX1A-210ENST00000491427 ZNF608Q9ULD9 1512 aaPredicted RBP28.62■■■□□ 2.17
STX1A-210ENST00000491427 ABCC8Q09428 1581 aa28.6■■■□□ 2.17
STX1A-210ENST00000491427 DNMBPQ6XZF7 1577 aa28.47■■■□□ 2.15
STX1A-210ENST00000491427 RIMBP3CA6NJZ7 1639 aa28.4■■■□□ 2.14
STX1A-210ENST00000491427 RIMBP3BA6NNM3 1639 aa28.4■■■□□ 2.14
STX1A-210ENST00000491427 RIMBP3Q9UFD9 1639 aa28.4■■■□□ 2.14
STX1A-210ENST00000491427 AQRO60306 1485 aaKnown RBP eCLIP28.4■■■□□ 2.14
STX1A-210ENST00000491427 EIF4G3O43432 1585 aaKnown RBP28.37■■■□□ 2.13
STX1A-210ENST00000491427 FBLN2P98095 1184 aa28.35■■■□□ 2.13
STX1A-210ENST00000491427 ARHGEF11O15085 1522 aa28.34■■■□□ 2.13
STX1A-210ENST00000491427 POLA1P09884 1462 aaPredicted RBP28.31■■■□□ 2.12
STX1A-210ENST00000491427 TARBP1Q13395 1621 aaKnown RBP28.31■■■□□ 2.12
STX1A-210ENST00000491427 CYB5RLQ6IPT4 315 aa28.29■■■□□ 2.12
STX1A-210ENST00000491427 SOGA1O94964 1423 aa28.27■■■□□ 2.12
STX1A-210ENST00000491427 RAD54L2Q9Y4B4 1467 aa28.24■■■□□ 2.11
STX1A-210ENST00000491427 TDRD9Q8NDG6 1382 aaKnown RBP28.24■■■□□ 2.11
STX1A-210ENST00000491427 CHD1O14646 1710 aa28.16■■■□□ 2.1
STX1A-210ENST00000491427 FGD5Q6ZNL6 1462 aa28.12■■■□□ 2.09
STX1A-210ENST00000491427 CHMP7Q8WUX9 453 aaPredicted RBP28.11■■■□□ 2.09
STX1A-210ENST00000491427 TRHP20396 242 aaPredicted RBP28.06■■■□□ 2.08
STX1A-210ENST00000491427 SNAPC4Q5SXM2 1469 aa28.06■■■□□ 2.08
STX1A-210ENST00000491427 ARAP1Q96P48 1450 aa28.05■■■□□ 2.08
STX1A-210ENST00000491427 CUX1P39880 1505 aa28.04■■■□□ 2.08
STX1A-210ENST00000491427 WDR97A6NE52 1622 aa28.02■■■□□ 2.08
STX1A-210ENST00000491427 GRIN2BQ13224 1484 aa28■■■□□ 2.07
STX1A-210ENST00000491427 MAGI1Q96QZ7 1491 aaPredicted RBP27.99■■■□□ 2.07
STX1A-210ENST00000491427 SUPT5HO00267 1087 aaKnown RBP27.97■■■□□ 2.07
STX1A-210ENST00000491427 SYNJ1O43426 1573 aa27.9■■■□□ 2.06
STX1A-210ENST00000491427 SYNJ2O15056 1496 aa27.9■■■□□ 2.06
STX1A-210ENST00000491427 CLASP1Q7Z460 1538 aa27.89■■■□□ 2.06
STX1A-210ENST00000491427 GAPVD1Q14C86 1478 aa27.89■■■□□ 2.05
STX1A-210ENST00000491427 ABCA10Q8WWZ4 1543 aa27.8■■■□□ 2.04
STX1A-210ENST00000491427 WRNQ14191 1432 aaPredicted RBP eCLIP27.73■■■□□ 2.03
STX1A-210ENST00000491427 PBRM1Q86U86 1689 aa27.72■■■□□ 2.03
STX1A-210ENST00000491427 ABCA5Q8WWZ7 1642 aa27.68■■■□□ 2.02
STX1A-210ENST00000491427 GRIN2AQ12879 1464 aa27.6■■■□□ 2.01
STX1A-210ENST00000491427 FHAD1B1AJZ9 1412 aa27.54■■■□□ 2
STX1A-210ENST00000491427 TOP2BQ02880 1626 aa27.54■■■□□ 2
STX1A-210ENST00000491427 NUP160Q12769 1436 aa27.51■■□□□ 1.99
STX1A-210ENST00000491427 BIVM-ERCC5R4GMW8 1640 aa27.5■■□□□ 1.99
STX1A-210ENST00000491427 ADAMTS12P58397 1594 aa27.5■■□□□ 1.99
STX1A-210ENST00000491427 CEP170Q5SW79 1584 aa27.46■■□□□ 1.99
STX1A-210ENST00000491427 ERCC6L2Q5T890 1561 aa27.45■■□□□ 1.99
STX1A-210ENST00000491427 ERICH3Q5RHP9 1530 aa27.44■■□□□ 1.98
STX1A-210ENST00000491427 AEBP2Q6ZN18 517 aaPredicted RBP27.38■■□□□ 1.97
STX1A-210ENST00000491427 JPH4Q96JJ6 628 aa27.37■■□□□ 1.97
STX1A-210ENST00000491427 SHROOM2Q13796 1616 aa27.33■■□□□ 1.97
STX1A-210ENST00000491427 PRG4Q92954 1404 aaPredicted RBP27.33■■□□□ 1.96
STX1A-210ENST00000491427 NPM1P06748 294 aaKnown RBP eCLIP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms