RNA–Protein interactions for RNA: ENST00000491362.1

USP30-207, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 2

Gene USP30, Length 745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-207ENST00000491362 NISCHQ9Y2I1 1504 aa21.32■■□□□ 1
USP30-207ENST00000491362 CHIC1Q5VXU3 224 aa19.52■□□□□ 0.72
USP30-207ENST00000491362 AEBP2Q6ZN18 517 aaPredicted RBP19.42■□□□□ 0.7
USP30-207ENST00000491362 CCDC180Q9P1Z9 1646 aa19.12■□□□□ 0.65
USP30-207ENST00000491362 ABCC9O60706 1549 aa18.95■□□□□ 0.62
USP30-207ENST00000491362 RB1CC1Q8TDY2 1594 aa18.15■□□□□ 0.5
USP30-207ENST00000491362 NACADO15069 1562 aa18.08■□□□□ 0.49
USP30-207ENST00000491362 MYO15BQ96JP2 1530 aa17.95■□□□□ 0.46
USP30-207ENST00000491362 DCAF8L2P0C7V8 631 aa17.81■□□□□ 0.44
USP30-207ENST00000491362 DNAJC5BQ9UF47 199 aa17.75■□□□□ 0.43
USP30-207ENST00000491362 DCAF1Q9Y4B6 1507 aa17.7■□□□□ 0.42
USP30-207ENST00000491362 ZCCHC6Q5VYS8 1495 aaKnown RBP17.69■□□□□ 0.42
USP30-207ENST00000491362 UNC13AQ9UPW8 1703 aa17.65■□□□□ 0.42
USP30-207ENST00000491362 PABPN1Q86U42 306 aaKnown RBP eCLIP17.63■□□□□ 0.41
USP30-207ENST00000491362 BICRAQ9NZM4 1560 aa17.61■□□□□ 0.41
USP30-207ENST00000491362 SHROOM4Q9ULL8 1493 aa17.5■□□□□ 0.39
USP30-207ENST00000491362 SCRIBQ14160 1630 aa17.29■□□□□ 0.36
USP30-207ENST00000491362 PHF23Q9BUL5 403 aaPredicted RBP17.22■□□□□ 0.35
USP30-207ENST00000491362 EIF4G1Q04637 1599 aaKnown RBP17.16■□□□□ 0.34
USP30-207ENST00000491362 CC2D2AQ9P2K1 1620 aa17.16■□□□□ 0.34
USP30-207ENST00000491362 CECR2Q9BXF3 1484 aa17.11■□□□□ 0.33
USP30-207ENST00000491362 NCAPD3P42695 1498 aa16.71■□□□□ 0.27
USP30-207ENST00000491362 ATAD2BQ9ULI0 1458 aa16.62■□□□□ 0.25
USP30-207ENST00000491362 SMARCA2P51531 1590 aa16.59■□□□□ 0.25
USP30-207ENST00000491362 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
USP30-207ENST00000491362 HMGXB3Q12766 1538 aa16.57■□□□□ 0.24
USP30-207ENST00000491362 BAZ1AQ9NRL2 1556 aaPredicted RBP16.55■□□□□ 0.24
USP30-207ENST00000491362 PEG3Q9GZU2 1588 aa16.51■□□□□ 0.23
USP30-207ENST00000491362 BAZ1BQ9UIG0 1483 aaKnown RBP16.42■□□□□ 0.22
USP30-207ENST00000491362 CUX2O14529 1486 aa16.42■□□□□ 0.22
USP30-207ENST00000491362 SENP3Q9H4L4 574 aaPredicted RBP16.39■□□□□ 0.21
USP30-207ENST00000491362 MROH2BQ7Z745 1585 aa16.38■□□□□ 0.21
USP30-207ENST00000491362 ERCC6Q03468 1493 aa16.36■□□□□ 0.21
USP30-207ENST00000491362 DNAJC5Q9H3Z4 198 aa16.32■□□□□ 0.2
USP30-207ENST00000491362 NESP48681 1621 aa16.29■□□□□ 0.2
USP30-207ENST00000491362 LAMC3Q9Y6N6 1575 aa16.29■□□□□ 0.2
USP30-207ENST00000491362 PDS5BQ9NTI5 1447 aa16.19■□□□□ 0.18
USP30-207ENST00000491362 CADPSQ9ULU8 1353 aa16.17■□□□□ 0.18
USP30-207ENST00000491362 THOC2Q8NI27 1593 aaKnown RBP16.17■□□□□ 0.18
USP30-207ENST00000491362 WIZO95785 1651 aa16.14■□□□□ 0.18
USP30-207ENST00000491362 RSF1Q96T23 1441 aaPredicted RBP16.11■□□□□ 0.17
USP30-207ENST00000491362 PLPPR3Q6T4P5 718 aa16.1■□□□□ 0.17
USP30-207ENST00000491362 KIF21AQ7Z4S6 1674 aa16.07■□□□□ 0.16
USP30-207ENST00000491362 TOP2AP11388 1531 aaKnown RBP16.02■□□□□ 0.15
USP30-207ENST00000491362 CFTRP13569 1480 aa16.02■□□□□ 0.15
USP30-207ENST00000491362 MRC2Q9UBG0 1479 aa16.02■□□□□ 0.15
USP30-207ENST00000491362 WDR62O43379 1518 aa15.99■□□□□ 0.15
USP30-207ENST00000491362 CEP164Q9UPV0 1460 aa15.96■□□□□ 0.14
USP30-207ENST00000491362 FANCD2Q9BXW9 1451 aa15.95■□□□□ 0.14
USP30-207ENST00000491362 CCDC88BA6NC98 1476 aa15.83■□□□□ 0.12
USP30-207ENST00000491362 URB2Q14146 1524 aaKnown RBP15.8■□□□□ 0.12
USP30-207ENST00000491362 PRDM2Q13029 1718 aa15.79■□□□□ 0.12
USP30-207ENST00000491362 ABCC8Q09428 1581 aa15.7■□□□□ 0.1
USP30-207ENST00000491362 IFT140Q96RY7 1462 aa15.67■□□□□ 0.1
USP30-207ENST00000491362 TOPBP1Q92547 1522 aa15.65■□□□□ 0.1
USP30-207ENST00000491362 OSCARQ8IYS5 282 aa15.65■□□□□ 0.1
USP30-207ENST00000491362 DNMBPQ6XZF7 1577 aa15.61■□□□□ 0.09
USP30-207ENST00000491362 ZNF608Q9ULD9 1512 aaPredicted RBP15.57■□□□□ 0.08
USP30-207ENST00000491362 TARBP1Q13395 1621 aaKnown RBP15.52■□□□□ 0.08
USP30-207ENST00000491362 POLA1P09884 1462 aaPredicted RBP15.5■□□□□ 0.07
USP30-207ENST00000491362 EIF4G3O43432 1585 aaKnown RBP15.49■□□□□ 0.07
USP30-207ENST00000491362 TRIM41Q8WV44 630 aa15.48■□□□□ 0.07
USP30-207ENST00000491362 WDR97A6NE52 1622 aa15.44■□□□□ 0.06
USP30-207ENST00000491362 AQRO60306 1485 aaKnown RBP eCLIP15.44■□□□□ 0.06
USP30-207ENST00000491362 SOGA1O94964 1423 aa15.43■□□□□ 0.06
USP30-207ENST00000491362 CUX1P39880 1505 aa15.39■□□□□ 0.05
USP30-207ENST00000491362 FGD5Q6ZNL6 1462 aa15.39■□□□□ 0.05
USP30-207ENST00000491362 RAD54L2Q9Y4B4 1467 aa15.39■□□□□ 0.05
USP30-207ENST00000491362 RIMBP3CA6NJZ7 1639 aa15.37■□□□□ 0.05
USP30-207ENST00000491362 RIMBP3BA6NNM3 1639 aa15.37■□□□□ 0.05
USP30-207ENST00000491362 RIMBP3Q9UFD9 1639 aa15.37■□□□□ 0.05
USP30-207ENST00000491362 ARHGEF11O15085 1522 aa15.36■□□□□ 0.05
USP30-207ENST00000491362 TDRD9Q8NDG6 1382 aaKnown RBP15.36■□□□□ 0.05
USP30-207ENST00000491362 CHD1O14646 1710 aa15.32■□□□□ 0.04
USP30-207ENST00000491362 MAGI1Q96QZ7 1491 aaPredicted RBP15.32■□□□□ 0.04
USP30-207ENST00000491362 SUPT5HO00267 1087 aaKnown RBP15.31■□□□□ 0.04
USP30-207ENST00000491362 GRIN2BQ13224 1484 aa15.31■□□□□ 0.04
USP30-207ENST00000491362 SNAPC4Q5SXM2 1469 aa15.28■□□□□ 0.04
USP30-207ENST00000491362 ABCA10Q8WWZ4 1543 aa15.27■□□□□ 0.04
USP30-207ENST00000491362 FBLN2P98095 1184 aa15.27■□□□□ 0.04
USP30-207ENST00000491362 SYNJ2O15056 1496 aa15.26■□□□□ 0.03
USP30-207ENST00000491362 GAPVD1Q14C86 1478 aa15.25■□□□□ 0.03
USP30-207ENST00000491362 CHMP7Q8WUX9 453 aaPredicted RBP15.24■□□□□ 0.03
USP30-207ENST00000491362 CLASP1Q7Z460 1538 aa15.23■□□□□ 0.03
USP30-207ENST00000491362 ABCA5Q8WWZ7 1642 aa15.22■□□□□ 0.03
USP30-207ENST00000491362 WRNQ14191 1432 aaPredicted RBP eCLIP15.22■□□□□ 0.03
USP30-207ENST00000491362 SYNJ1O43426 1573 aa15.22■□□□□ 0.03
USP30-207ENST00000491362 CYB5RLQ6IPT4 315 aa15.21■□□□□ 0.03
USP30-207ENST00000491362 ARAP1Q96P48 1450 aa15.2■□□□□ 0.02
USP30-207ENST00000491362 TOP2BQ02880 1626 aa15.19■□□□□ 0.02
USP30-207ENST00000491362 BIVM-ERCC5R4GMW8 1640 aa15.18■□□□□ 0.02
USP30-207ENST00000491362 PBRM1Q86U86 1689 aa15.17■□□□□ 0.02
USP30-207ENST00000491362 FOXD1Q16676 465 aa15.15■□□□□ 0.02
USP30-207ENST00000491362 GRIN2AQ12879 1464 aa15.09■□□□□ 0.01
USP30-207ENST00000491362 ERICH3Q5RHP9 1530 aa15.09■□□□□ 0.01
USP30-207ENST00000491362 FHAD1B1AJZ9 1412 aa15.09■□□□□ 0.01
USP30-207ENST00000491362 NUP160Q12769 1436 aa15.08■□□□□ 0
USP30-207ENST00000491362 ADAMTS12P58397 1594 aa15.07■□□□□ 0
USP30-207ENST00000491362 ADRA2BP18089 450 aa15.07■□□□□ 0
USP30-207ENST00000491362 PPP6R1Q9UPN7 881 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms